Podarcis raffonei (Aeolian wall lizard): 128403517
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Entry
128403517 CDS
T09310
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04136
Autophagy - other
praf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128403517 (ATG2A)
04136 Autophagy - other
128403517 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128403517 (ATG2A)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128403517 (ATG2A)
Membrane trafficking [BR:
praf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128403517 (ATG2A)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128403517 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
128403517
NCBI-ProteinID:
XP_053224318
LinkDB
All DBs
Position
16:complement(15581567..15619239)
Genome browser
AA seq
2011 aa
AA seq
DB search
MSRWFFPWSSSIKKRACRYLLQHYLGHFLEERLGLEQLSLDLYAGAGKLSRIHLDVWSVN
EFLESVGAPLEIVDGFIDSIAVTIPWSALVTENCTVEVSGLQITCRPKYRTAAPGSESQS
WASCMTTSMQLAQECLKEQAEEPSDTPQPLEGLEMFAQTIETVLRRIEVTFLDTVIRVEH
VPSGSQGSVALEMHIKRLDYCDEAVKEPGQAITVDIHQPPPFVHKILQLSGVLLYYEEFA
GGAGGHMPSSPVPKGAAESSESQAEEAEEEEASPSSLLQIGSCSGYTEMRIKLKQNEAFP
GPKLELDGKMGSLHLLLAPQQILYLLDLLSSLNFSESSLLQEQLSKSRPLDSEDLKLIEQ
DLSQQLHSGLGAGPTRLEGMETCVGLENGEMFFSMAPMTSSVTSVRSASELSDIDLDSSM
HSDAGTSRLQALPFAPGLMLSSPRRYGRSPFAATLPCLNKIPSKTSHPQPPSLENQRPEV
LLRLTIGGLTLTLLYQTPEAPHLQLAQRFFSQLGGLKDSAFGGRDFQPLRQCFEGACPRS
NVRLTGAAVQISCEHKASGQLHMFSWDASFGLLEILECLWTDDRTQAKPEYTELLVFATP
SAFPYSQSPRPCARLQTKHSEKRPSSSKSRLAKVPAKQTVELVAELDDFCSDVDLATLDR
LCSLLCRATTPSTPAWPPPEAHLADSPPAAKWQASVRLAAPKATLRLQFPIPDLRPWPER
RPWAQKAVRQESLRLDLAGVELQVELGLAGITQLELAFSDLHGTYEGAEKLAVPCLRVGK
APDLSAKGTGKKYLLPKIALTLRPRASDTPWDLALAKPGEMELSTAESPCELKQPEPSPF
SSKRTMYETEEMVIPGDPEEMAEFQSQTLEASQYALEVTFPTMHIFLPSKDFYESIYNRI
NNDLLMFESFSPPPTPSELLGGAGSTTAPFVGEAPAGDTRWQENFKMCKSAFKLDSDSED
EDSHFYSVDEAAQRKKGEQRSPFPQSCVSVVLSVGKGRVTALCDAKGEGGKKLEGSHGEL
VLDVESGSLFSVSRYKGREDLGYFCIEAEKVALYHKAVVEDYLMAEHLEISNFLPPEGLN
PTIYASQEGPITWPLGSKKDGPLKMLSLAIQINLDLEKNIKEFLVTLRLEGATMRHHMAL
THQSWYTQLIDFLDVLDDPILGFVPPTVITVLHTHLFSCAVDYRPLYLPIRVLITAETFT
LSSNIIVDTSVFLLRFILDDSALYLSNKCDTEMGDLRRDYVCVVDVDLLELVITTFKGAT
TGKLTRPLFELRCSNNVVHVHTCADSCAALANLIQYVVNNGDLHPPPHHDSPTEIAGQKV
QLSESPASLPSCPPAETAAINQQDLTDALIDTERSLQELAGEMGDSGLRRQPSPVSVYLF
PGENGAMGKAGKTPAPPPTPVGEGLDFSPSEDSEGESEATDDFCILDAPGTGIPPRDGEP
VVTKLLEGPVRIQEGHFSRPLGSTDLLKAPSRFPVPESRVMMREISVVWHLYGGRDFGLG
RSASGHAHSPRTKPSLSSARSSPSRSSVTNRPQNTWRAQGGTSRIHDLLMEIQLTKVSFQ
HETYPSSSSSSSGGTSEKPSVELEEQPVARQVFIVQELEIRDRLASSQINKFLYLYSSEC
MPRRAHSNMLTIKALHVCPESGLGGPECCLRVSLMPLRLNIDQDALFFLKDFFTSVAASI
NPVVPCEAGSEGRPESSGKEPEGAEGEMTASMETTASENSSLSNASSSSSDQPIYFREFR
FTSEVPIWLDYQGKHVTVDQVGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVEKVVSYA
LTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGLRDLFWLPIEQYRKDGRIIRGLQRGAAS
FGTSTASAALELSNRLVQAIQATAETVYDILSPTAPPMTRTLLDKKHTRKLRRGQQPADL
REGVAKAYDTVREGVIDTAQAICDVATRGHEQKGITGAVGGVLRQIPPTVVKPLIVASEA
TSNLLGGMRNQIKPDARKEESLKWRSEEAQD
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgatggttcttcccgtggtcgagctcgatcaagaagcgcgcctgccggtacctg
ctgcagcactacctgggacacttcctagaggagcggctcgggctggagcagctcagcctc
gacctctacgctggcgctgggaagctcagccgcatccacctcgacgtctggtccgtcaac
gagttcctggagtccgtcggagcacccttggaaatcgtcgacggcttcatcgacagcatc
gccgtcaccatcccctggtccgccttagtcacagagaactgcaccgtggaagtgagcggc
ctgcagatcacgtgccggccaaagtatcgtactgctgcccctggctccgagtcacagagc
tgggcatcatgcatgaccaccagcatgcagctggcacaggagtgcctgaaggagcaggcc
gaggagccctcagacaccccccagcccctggaggggctcgagatgtttgcccaaaccatt
gaaaccgttctgcgaaggattgaagtcaccttcttggacactgtgatacgtgtggagcat
gtgcccagtggctcacagggcagcgtggcccttgagatgcacatcaaaagattggactac
tgtgacgaagccgtgaaggaacccgggcaggcaatcaccgtagacatccaccagccgcca
ccgtttgtgcacaagatcctgcagctgagcggggtcctgctttactatgaggagtttgcg
ggtggcgcgggcggccacatgccatcgtcccctgtcccaaagggggctgccgagtcttca
gagtcccaggcggaggaggcagaggaggaagaggcttcccccagctctctgcttcagatt
ggcagctgctctggatacacggagatgaggatcaagctgaagcagaacgaggcctttcct
gggcccaagctggaactggatgggaagatggggtcactgcacctcctgcttgccccccaa
cagatcctatacctgctagatcttctgtcttccctgaacttctctgaatccagcctcttg
caggagcagctgagcaagagtcgcccccttgactcagaggacctgaagctgattgagcag
gacctcagccaacagctgcactcagggctgggggctggccccacccgcctggaggggatg
gagacctgcgttgggctggagaacggagagatgttcttctccatggctcccatgaccagc
agcgtgacctccgtgcgctcagccagcgagctctctgacatcgacctagactcctccatg
cacagcgacgctggcaccagccgcctacaggctctgcccttcgcgccagggctgatgttg
agcagtcccaggcgttacggacggtcaccctttgctgccaccctgccgtgcctcaacaag
ataccaagcaagaccagccacccacaacccccctctctggagaaccagcggcctgaggtg
ttgctgcggctgacgattggagggctcactctcacgctgctgtaccagaccccagaggcc
ccacatctccagctggctcagcgcttcttctcccagcttggaggcctgaaggactctgcc
tttgggggccgggatttccagcccctgcgccagtgctttgagggggcctgtccacgcagc
aacgtcaggctgactggggccgctgtgcagatcagctgcgagcacaaggcctctgggcag
ctgcacatgttcagctgggatgcatcctttgggctcctggagatcttggagtgcctgtgg
acagacgacaggacgcaagccaagccagagtacaccgagctgctggtcttcgccacccct
agtgcctttccctacagccagtcgcctcgcccctgtgcccgtctccaaaccaagcattcg
gagaagcggccttcatcctccaagagccgccttgccaaggtccctgccaagcaaacggtg
gagctggtggcggagctggacgacttctgctccgacgtggacctggcgacgctcgaccgc
ctttgctcgctgctgtgccgtgccacgacgccctccacgccagcctggcctcctcccgag
gcacacttggcagattctccccctgctgccaagtggcaggcaagtgtgcgactggcagcg
cccaaggccaccctaaggctgcagttcccgatcccagacctccgtccgtggccagagagg
cggccctgggcccagaaggccgtgcggcaggagagcctgcgcctggacctggccggcgtg
gagctgcaggtggagcttgggctggcaggcatcacccagctggaacttgccttcagtgac
ctgcatggcacgtatgaaggcgccgagaagctggccgtgccgtgcttgcgggtcggcaaa
gcccccgacctgtccgccaaagggacggggaagaagtacctcctccccaaaatcgcgttg
accctccgccctcgggccagcgacactccctgggacttggccctggcgaagcccggagag
atggagctgtcaacggccgagagcccctgcgagctgaagcagccggagccttcgcccttc
tcctctaagcggaccatgtatgagacggaggagatggtgatcccgggagatcccgaggag
atggcggaattccagagccagacactggaggcctcccagtatgccctggaggtgaccttt
cccaccatgcacatcttcctccccagtaaggacttctacgagagcatctacaacaggatc
aataatgatctcctgatgttcgagtccttcagcccaccccccaccccctccgagcttctg
gggggcgctgggtccacaacagccccctttgttggagaagcaccagcgggtgacacccgc
tggcaggagaacttcaagatgtgcaagtcggcctttaagctggattcagactccgaagat
gaggattctcacttctactccgtggatgaggcagcacagcggaagaagggggaacagagg
agcccctttccccagagctgtgtctctgttgtgctctctgtggggaaggggcgggtcaca
gccctgtgcgatgccaagggcgaggggggcaagaagctggagggatctcacggcgagctg
gtcctggacgtggaaagcggcagtctcttcagcgtctcgcggtacaagggccgtgaggac
ctcggctacttctgcattgaggcagagaaagttgcactttatcacaaggctgtggtggag
gactacctcatggcggagcatctggaaatctccaactttttgcccccggaggggctcaac
cccaccatctatgcctcccaagagggccccatcacctggcccttggggagcaagaaggac
gggcccctgaagatgctctccctggctatccagatcaacctggatttggagaagaacatc
aaggagttcctggtgacgctgcggctcgaaggggcaaccatgcggcatcacatggccctg
actcaccagagctggtacacgcagttgattgacttcctggatgtcctggatgaccccatc
ctgggctttgttcctcccacagtcatcacagtgctgcacacccacctgttcagctgtgct
gtggattacaggcctctctacttgccaatccgggtcctcatcacagccgagaccttcacc
ctctccagcaacatcattgtggacacgtccgtcttcctccttcggttcattttggacgac
tcggccctttacctctcaaacaaatgcgacacagagatgggcgacctgaggagagattat
gtttgcgttgtggatgtggaccttctggagctggtgatcaccacgtttaagggagccacg
acagggaagctgacccgccctctgtttgagctccgctgctccaacaacgtggtccatgtg
cacacctgcgcagattcctgtgcggccctcgccaacctcatccagtacgtggtgaacaat
ggggacttgcaccccccgcctcaccatgacagccccacagagatcgccggccagaaggtg
cagttgtctgagagcccggcatcgctgccgtcatgtccacctgctgagaccgcagccatc
aaccagcaagacctcacggacgccctcattgacacagagcgcagcctccaggaactggcc
ggagagatgggtgactctgggctcaggcggcagccctccccggtttctgtctacctgttc
cccggggagaacggagccatgggcaaggcaggaaagaccccggccccaccacccactccc
gtcggggaggggctggacttcagcccttcggaggacagcgagggcgagagcgaagccacg
gacgacttctgcatcctggatgccccaggcacaggaatcccgccccgagacggggagccg
gtggtgacgaagctcttggaaggccccgttcgcatccaggaggggcacttctcccgcccc
ctggggagcacagacctcctgaaggccccctcgcgcttcccggtccccgagagccgggtg
atgatgcgggagatctcggtggtctggcatctctatggcgggagggactttgggctgggg
cgctctgcctctggccacgcccactcacccaggacgaagccgtctctttccagcgcccgc
tcgtccccgtcccgctcctctgtcaccaaccggccccagaacacctggcgggctcagggg
ggcaccagccgcatccacgacctgttgatggagatccagctgacaaaggtgagtttccag
catgaaacgtaccccagcagcagcagcagcagcagcggcggcacatctgagaaaccctcc
gtggagttggaggagcagcccgtggccagacaggtcttcattgtccaggagctggagatc
cgagaccgcctggcctcctctcagatcaacaagttcctctacctgtacagcagcgagtgc
atgccgcgccgagcccactccaacatgctcaccatcaaagccctgcacgtctgccctgag
tctggtctggggggtcccgagtgctgccttcgtgtctccttgatgccactcagactcaac
attgaccaggatgccttgttcttcctcaaggacttcttcaccagtgtggctgccagcatt
aaccccgtcgtgccctgcgaggctggctcagaaggtcgcccagagtcctcggggaaagag
cctgagggagcggagggggagatgacagcctcaatggagaccacggccagcgaaaacagc
tccttgtccaacgcctcctcttcttcctccgaccagcccatttacttccgagagttccgg
ttcacgtccgaagtgcccatctggctggactaccagggaaagcatgtgaccgtcgaccaa
gtgggcacctttgccggcatcctcatcggcctggcgcagctcaactgctctgagctcaag
ctcaagaggctctgctgtcgacacgggctactgggcgtggagaaggtggtgagctacgcc
ctgaccgagtggctgacggacatccgcaagaaccagctgccaggcatcctgggaggcgtg
gggcctatgcactccgtggtgcagctcttccacggcctccgtgacctcttctggctgccc
atcgagcagtaccgcaaggacgggcggatcatccggggcctgcagcgtggggcagcctcc
ttcggcacttcaaccgcgtcggcagccctcgagctcagcaaccgcctggtgcaggccatc
caggccacagcggagaccgtctacgacatcttgtcccctaccgcccccccgatgacgcgc
accctcctggacaagaagcacacgcgcaagctgaggcgcggccagcaacctgccgacctg
cgtgaaggggtggccaaggcctatgacaccgtacgagagggtgtcatcgacacagcccag
gccatctgcgacgtggcgactcgtggccacgagcagaaaggcatcaccggggcggtggga
ggcgtcctgcggcagatccctcccaccgtggtcaagcccctcatcgtggcctcggaagcc
acctccaacctcctgggtggtatgcgcaaccagatcaagcccgacgcccggaaggaggag
tccctgaagtggcgctcagaagaggctcaggactga
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integrated database retrieval system
