Podarcis raffonei (Aeolian wall lizard): 128403588
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Entry
128403588 CDS
T09310
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128403588 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128403588 (SART1)
04121 Ubiquitin system [BR:
praf04121
]
128403588 (SART1)
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128403588 (SART1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
128403588 (SART1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128403588 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
128403588
NCBI-ProteinID:
XP_053224470
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All DBs
Position
16:16792181..16807958
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AA seq
829 aa
AA seq
DB search
MGSSKRHRERAETSEEPPPPASGTGGTGTSSSSSRHREHKKHKHRSSGGGGSNNGSERRS
KRSRSRGERSSRRSGGDEAATATASSSSSRGSRAAASGSQEGEVGRRIKREKRDEGYEAA
QSSVVGPKSSSGDASLSIEETNKLRAKLGLKPLEINSVKKETGSKEDPVAAEVINPIVLK
QREEIREKLAAAKEKRLLNQKLGKIKSLGEDDPWLDDTAAWIERSRKLQLEKDMAEKRAK
LLEEMDQEFGVSSLVEEEFGQNKKVSYSSRDLKGLTVEHTIDSFQEGKTVILTLKDKGVL
EEEGGDVLVNVNIVDNEKAKKNVELRKKKPEYKPYEEEESVDDMVLYKHKSVLSKYDEEI
EGEKKKSFKLDSVGMADGSWERELQQIRDSLHNRAQTLDVPGLRLASEYFSPEEMNVTFK
KTKRRVKKIRKKEKPVKADDLLPLSSMDSERDFGSRARGRGRRRKTAVVEEEEEEEDGEG
YTEYARNGASEQLPQSDDIRVERMEISSEDEDALAGPDSPAALEEDEAELELQKQLEKGR
KLRQIQQLKDSGEKVIEIVKKLETSRSQEDDDELERKGAIVFNATSEFCRTLGEIPTYGL
AGNREDQEELMDFERDDERSANGGSDSDGEENIGWSTVNLDEEKQQQDFSASSTTILDEE
PIVNRGLAAALMLCQNKGLLETTVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEY
RGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLD
EEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMNANTITK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtcgaagcggcaccgggagcgggccgagacctccgaagaacctccgcctcct
gcctccggcaccggtggcaccgggacctcgtcgtcgtcgtcccgccaccgcgagcacaag
aagcacaagcatcggagcagcgggggcggcggcagcaacaacgggagcgagcggcggagc
aagcggagccgcagccggggcgagcggagcagccggcggagcggcggggatgaggcggcc
accgctaccgcctcctcctcctcttcccggggaagccgtgctgccgctagcgggagccag
gaaggcgaggtggggaggcgaatcaagcgggagaagcgcgacgaaggatatgaagccgcc
caaagctcagttgtcggtccaaagtctagctcaggagatgcttccctcagcattgaggag
acaaacaagcttcgggctaagcttgggctgaagcctttggagatcaattctgtcaaaaag
gaaactggcagcaaggaggaccctgtggcagctgaggtcatcaacccaatagtgttgaag
cagcgagaggagatccgggagaagctcgctgctgccaaggaaaagaggctcctgaaccag
aaactagggaagatcaagtcgcttggcgaagatgacccctggctcgatgacaccgctgcc
tggattgaaagaagtcggaagctgcagctggagaaggatatggctgagaagagggccaag
ctcttggaagagatggatcaggagtttggcgtcagcagcctcgtggaggaggaatttggg
cagaataagaaggtgagctacagctcacgggatttgaagggtctgacagtagagcacacc
attgattccttccaggaagggaagacggtcatcctgacgctcaaggacaaaggagtcttg
gaggaggagggtggcgatgtgctggtgaacgtcaacatagtggacaacgagaaagccaag
aagaacgtggagctgcgcaagaagaagccggaatacaagccctatgaggaagaggagagt
gtggatgacatggtgctctacaagcacaagagtgtcctgtccaagtacgatgaagaaatc
gaaggggagaagaagaagtccttcaagctggactcggtggggatggcagacgggtcttgg
gagcgggagctgcagcagatccgggacagcctacacaaccgggctcagaccctggatgtg
ccgggcctccgcctggcttcagagtacttctcaccagaggagatgaacgtcactttcaag
aagacaaagcgacgggtgaagaagatccgcaagaaggagaagccagtgaaggccgatgat
ctcctgccgctgagcagcatggacagcgagagggactttggctccagggctcgtggccgg
gggaggaggaggaagactgccgtggtggaggaagaagaggaggaggaggatggtgagggc
tacacggaatatgccaggaatggagcttcagagcagttgccccagtcagacgacattcgg
gtggagagaatggagatcagcagtgaggatgaagacgctctcgcaggccctgactctcct
gctgccctggaggaggatgaggcggaactggagcttcagaagcagctggaaaaggggcgg
aagctgcggcagatccagcagctgaaggacagtggggagaaggtcatagaaatagtgaag
aagctggagaccagccgaagccaagaggacgacgatgagctggagcggaagggggccata
gtcttcaacgccacctccgagttctgccgcacgctgggcgagatccccacctacgggctg
gccggcaaccgcgaggaccaggaagagctcatggattttgagcgagatgacgagaggtca
gcaaacgggggctcagactcagacggggaggagaacatcggctggagcactgtcaatctg
gacgaggagaaacagcagcaggatttctcagcatcctccaccaccatcttggacgaggag
cccattgtgaaccggggcctggcggctgctcttatgctctgccaaaacaaaggcttgctg
gagactaccgtacagaaggtggcaagagtgaaggcacccaataagtcactgccatcggca
gtctactgcattgaggacaaaatggccattgatgacaaatacagccggcgtgaagaatac
cggggcttcactcaggacttcaaggagaaagacggttacaaaccagatgtgaaaatagaa
tatgtagatgagactgggcgcaaactcacacccaaagaggcgttccgacagctctctcac
cgcttccacgggaagggttctgggaagatgaagaccgagcggcgcatgaagaaactagac
gaggaggcgctcttgaaaaagatgagctccagcgacacccctctgggcacggtggctttg
ctgcaggagaagcagaaggcccagaagactccttacatcgtgctcagtggcagcgggaag
agcatgaatgcaaacaccatcaccaaataa
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