Podarcis raffonei (Aeolian wall lizard): 128403680
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Entry
128403680 CDS
T09310
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128403680 (DENND4B)
Membrane trafficking [BR:
praf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128403680 (DENND4B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
SPA
PPR
Motif
Other DBs
NCBI-GeneID:
128403680
NCBI-ProteinID:
XP_053224635
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All DBs
Position
16:7428061..7484381
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AA seq
1499 aa
AA seq
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MTDEWAPQLVDYFVVAGLADTSAPLEDESQPPRPSRPSEPIVDVAVIVRSQGEEVPHGFT
CIDRTTSGNPVELNAGLLNNPQMYICYRRGRDKPPIVELGVHYDGKDHPKPGYKIIDTTP
YSHSANLASGAPGHQRTFLTYRRASKSQAYSTLGITDICLIMPSKGESLPHTFCRVDRNL
NVGMWGPALYICYKMALAKGNTLVYQAGLLSRYPEEDNEAFPLPESVAVFCLPMGATIES
WPADTKYQLPVFSTFVLTGASGDKVYGAAIQFYESFPRERLSERQCMWLNLLTVVDRRPI
TSKSVQTRKSICVLSHWPFFDVFRKFLTFLYRYSISGPHVLPLEAHISHFMHNVPFPSPQ
RPRILVQMSSYDNMLLCQPVSSPLPLSGASFLTLLQTLGPENAVALLVAVLTEQKLLIHS
LRPDVLTSVGEALVSMIFPLHWQCPYIPLCPLTLADVLCAPVPFIVGVHSSYFDLYDPPH
DVICVDLDTNTIFQCEERKLLSTRSLPRKPCKVLLACLNSLYHQLDEMYNRPVEEATLEF
LLTDYDVIYGRRKQLELDIQGAFLRFMACLLKGYRCYLLPITQAPSEKTRDSSSLFNLQG
FLKSRDRAYHKFYGQLLRTQLFTQFIEECSFVNDRHTSLEFFDSCVEKVQVELEKMEESP
LIELDDTHGSEHTVFIMPPEEPAGPNGTELPPRYQYDGFPRLQAKLFERPQDQLMPSLCQ
ARTSAPSSPAPRRTKQEMKVAQRVAQKYSAMPDMWAKCLLGHCYGLWFITLPTYVRAATS
KVRALQTAYEVLKQMETRKVVLPDEVCYRILMQLCGQYGEPVLSVRVLLEMKRAGIVPNT
ITYGYYNKAILECKWPSGTQGGRLRWAKLRNVVLGAAQFRQPLRQRQREAESQSVSGQSE
GRGIKMPGSRSRSRSNLQRQTTWSGGNVTENLPSTSLVKSGSLSFPQQEPEAGVARATKG
LGATDHGSSSTLPALPHWLQGRAGSSEDGSLSDVSSFLTDESDRLTLSSVDTQPGPGRLE
GSATGSENRGIGSGTPRRSLAAKLQQLLSPIKRPSLRHGATAEHSHARRGSEQRELPPRR
SPLESRLLLPRERPGSTASESSVSLGSEYDYSNSSLCSFNLRKSTDLLTESPAVEVLLSS
CSRCQACSSLVYDEEVMAGWSSDDSNLNTTCSFCARPFVPFLSIEIQDFQAAPSIADTSD
TSSISSDWPRDSEAPAPGSQGPVLSDRSHCLSLDEAEPEPGRESRAGSLCNGFTESPVPQ
GPAPEVEHLAFAYLSPLVLRKELETLLENEGGDFLSQPELVDNHPIIYWNLVWYFQRLGL
PSSLPQLLLASKHFQSAPQGLPQEGLLVNVRLVWDVLTPDPDSYPPLYVLWRFHGNIPTR
LQSWRRHNHPFSLSFLEAVLSSVGMGEMHKAISLFLDTVKEQSSTAHMPRSVYHEILFLK
LAALGRDHVDIADFDKKYKSAYSKLANSVGKETLKQWRAQPLTSKAIDCRKSFGANLEC
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagtgggccccgcagctggtggactactttgtggtggccggcttggcggac
acttcggcgccgctggaggatgagagccagccgcctcgcccgtcccggcccagcgagccc
attgtggacgtggccgtcatcgtgcgctcgcagggcgaggaggtgcctcacggcttcacc
tgcatcgaccgcaccacctccgggaaccctgtggagctcaacgccgggctgctcaacaac
ccccagatgtacatctgctacaggaggggccgggacaagccccccattgtggagctgggg
gtgcactacgacggaaaggaccacccgaagcccggctacaaaatcattgacacgactccc
tatagccattcggctaacctggcctcgggggcccccgggcaccagcgcaccttcctgacg
taccggcgagccagcaagagccaggcctacagcacgctgggcatcaccgacatctgcctt
atcatgcccagcaaaggcgagagcctcccacacaccttctgccgcgtggaccggaacctc
aacgtgggcatgtggggaccagccctctacatctgctacaagatggcgttggcaaaaggg
aacactctggtttaccaagcaggtctccttagtcgctacccggaggaggacaacgaggct
tttccgttgccggagtccgtggctgttttttgcctgcccatgggggcgaccatcgagagc
tggccggccgacacgaaataccagcttcctgtcttctccaccttcgtgttgactggggct
tcgggagacaaggtgtatggcgctgccatccagttctacgagtccttcccgcgggaacgc
ctctcggagcggcagtgcatgtggctgaacctcctcaccgtcgtcgaccggcgccccatc
accagcaaatcggtgcagacacgcaagagcatctgcgtcctgtcccactggccctttttc
gatgtcttccggaaattcctcactttcctgtaccgctacagcatctcggggcctcacgtt
cttccgctcgaggcgcacatctctcatttcatgcacaatgtccccttcccatctccacag
cggcctcggatcctggttcagatgtcttcctacgataacatgctcctgtgccagcctgtt
tcatctcctctgccactcagtggcgccagcttcctcacactgctgcagacactgggtccc
gaaaacgccgtggccctccttgtggcggtgctgacggagcagaagctgctcatccactct
ctgcggccagacgtcttgaccagcgtgggcgaagccttggtctctatgatattcccgctg
cactggcagtgcccttacatccccctctgcccgctcaccctggccgacgtgctgtgcgcc
ccggtgcccttcatcgtcggggtccactccagctacttcgacctctacgacccgccgcac
gatgtcatctgcgtcgatctggacaccaataccatcttccagtgcgaggaaaggaagctg
ctgtcaacacggtcgctgcctcggaaaccgtgcaaggtgctcttggcttgcttgaactcc
ctgtaccatcaactggatgaaatgtacaaccggcccgtcgaggaagcgaccctggaattc
ctgctgaccgactacgacgtcatctacggccggcggaaacagctggaactggatatccag
ggggctttcctgcgcttcatggcctgcctcctgaagggctaccgctgctacctcctgccc
atcacccaggcaccctctgagaagacccgcgactccagtagcctcttcaacctccagggc
ttcctgaagtcacgtgaccgggcgtatcacaagttttacggtcagctcctccgcacccag
cttttcacgcagttcattgaggagtgctccttcgtcaacgaccgccacacatccctagag
ttcttcgactcctgcgtggagaaggtgcaggtggagctggagaagatggaggaatctccc
ctgattgaactagacgacactcatggcagcgaacacaccgtcttcatcatgcccccggag
gagcccgccggacccaatggcactgagctgccaccacgctaccagtacgacggcttcccc
aggctgcaggccaagctctttgagcggccccaggaccagctcatgccctcactctgccaa
gcccggaccagcgctcccagcagcccagctccacgcaggaccaaacaggaaatgaaggta
gcccagcgggtggctcagaagtactctgcgatgcctgatatgtgggctaagtgcctgctt
gggcactgctacggcctgtggttcatcacgctgcccacctatgtgcgggctgcaacctct
aaggtccgggccctgcagacagcctacgaggtgctcaagcagatggagacaaggaaggtg
gtgcttcccgatgaggtttgctaccgaatcctgatgcagctgtgtggtcaatacggcgag
cctgtcctctccgtccgagttctgctggagatgaagcgggctggcattgtgcccaacacc
atcacctatggctactacaacaaggccattttggaatgcaaatggccgtctggtacccag
ggaggccgcctccgctgggccaagctgcgcaacgtcgtcctgggggccgcccagttccgc
cagcccctgcggcagcggcagcgcgaggcagaatcgcagagcgtcagcggccagtcagaa
ggcagaggcatcaagatgccaggctcccgctcccggtcccggtccaatctgcagcggcag
acgacttggtctgggggcaacgtgactgagaaccttccgtccacgtcgctggtgaagagc
ggcagcctcagtttccctcagcaggagccagaagctggagtggctcgtgcgaccaagggc
ctgggcgccacagaccacggcagcagcagcacgctccccgccctgccccactggctgcaa
ggccgggccgggagctccgaggacgggagcctgtcggacgtcagcagcttcttgacggac
gagagcgacaggttgaccctgagcagcgtggacactcagccgggcccggggcggttggaa
ggctctgccacagggtcggaaaaccgcggcatagggagcggcacaccacgcagaagcctg
gccgccaaactccagcagctgctctcgcccatcaagcggccgtcgctgagacacggcgcc
accgcagagcattcgcacgcacgccgcgggtccgagcagcgggagctcccacctcgccgc
agcccgctggaaagccgcttgttgcttcctcgcgagcgcccgggctccactgcctccgag
agttccgtgtccctgggcagcgagtacgattattcgaacagctccttgtgcagtttcaac
ctccggaaatccaccgatctgctgacagagtctccggcggttgaggtcctgctctctagc
tgttcccggtgccaggcctgcagctcgttggtgtacgacgaagaggtgatggccggctgg
agttcggacgattccaacctcaacaccacctgctccttctgtgcccgccccttcgtgccc
ttcctcagcattgagatccaggatttccaggcggcccccagcatcgctgacacctcggac
accagctctatctcctccgattggccgcgggacagcgaagcccccgccccagggagccag
ggccccgtcctcagcgaccgctcccactgcctgtctctggatgaagctgaaccggaaccc
ggaagggagtccagggctgggtctctgtgcaacggcttcaccgagtctccggttcctcag
ggtccggcccccgaagtggaacacctggcctttgcctacctgagccccttagtcctgcgg
aaggagctggagaccctcctggagaacgagggaggggacttcctgtctcagccggagctg
gtggacaaccacccaatcatctactggaacctggtgtggtacttccagcgtctgggtctg
cccagcagcctcccccagctgctcctggccagcaagcacttccagtcagcgccgcagggc
ttgcctcaggaggggcttcttgtgaacgtacgtttggtctgggatgtgttgacgccagac
cccgacagctaccccccactttacgtcctctggaggttccacggtaacatccccacccgc
ctccagtcctggcgccgacacaaccaccccttctcgctctcgttcctggaggctgtgctg
agctcggtcgggatgggcgagatgcacaaggccatctctctgttcctggacacggtgaag
gagcagtccagcacggcacacatgcccaggagtgtttaccacgagattctcttcttgaag
ctggcagccctgggcagagaccacgtggacattgccgacttcgacaagaaatacaaatct
gcctattctaagctggccaacagcgtggggaaggagactctgaagcaatggagagcccag
ccgctcacctccaaggccatcgactgccggaaaagctttggggccaacctggaatgctag
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