Podarcis raffonei (Aeolian wall lizard): 128403840
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Entry
128403840 CDS
T09310
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128403840 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128403840 (SNX27)
Membrane trafficking [BR:
praf04131
]
Protein recycling
Others
Others
128403840 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128403840 (SNX27)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
Dickkopf_N
VirE3
RA_3
Motif
Other DBs
NCBI-GeneID:
128403840
NCBI-ProteinID:
XP_053224914
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Position
16:complement(2864321..2909897)
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AA seq
598 aa
AA seq
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MADEGSEGLPRSVLPGPLRGGSSGGGGGGGGSGSLSSSSSSSAAAAAPAPSSSVAVATTP
TAPPQPPPPPPAPPAGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAV
LGGGAAERAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVPPHEADNLD
PSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQLCSKRYREFAILH
QNLKREFASFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSE
SDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVGMDSTTANYFALFEVI
NHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVLLNDNDLAVTYFFHQA
VDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIFPHCSCDSRRKGHVIT
AISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFT
PYFNYMHECFERVFCELKWRKEVEEEATDKDNKNCSKDNMCSKNIFQMMRTQHRDITT
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggagcgaggggctgccgcgctccgtcctgccgggcccgctgaggggc
ggcagctccgggggcggaggcggcggcggcggctcgggctccttgtcgtcgtcttcgtcg
tcgtcggcagcagcagcggcgccggctccctcctcctccgtcgccgtcgccaccaccccc
acggctccccctcagccgccgccgccgcctcccgcccccccggcggggcctcgcgtggtc
cgcatcgtcaagtcggaatccggctacgggttcaacgtgcgcgggcaagtgagcgagggc
gggcagctgcgcagcatcaacggggagctctacgcgccgctgcagcacgtcagcgccgtc
ctgggcgggggggcggccgagcgcgccggggtgcgcaaaggggaccgcatcctcgaggtg
aacggcgtgaacgtcgaaggggcgacgcacaagcaagtggtggacctgatccgggcgggg
gagaaggagctgattctgacggttctgtcggtgcccccccacgaggccgacaacctcgac
ccgagcgacgactctctgggccagtcgttctacgactacactgagaagcaggcagtgccc
atctccatccccacctacaagcatgtggaacagaatggtgagaagtttgtggtctacaac
gtttacatggcaggccggcagctgtgctccaagcggtaccgcgagttcgccatcctgcac
cagaacttgaagcgggagtttgccagcttcaccttcccccgcctgccgggcaagtggccc
ttctccttgtcagagcagcagctggatgccaggcggcgggggctggaggaataccttgaa
aaggtgtgttccatccgggtcatcggggagagcgacatcatgcaggagttcttgtcagag
tcagatgagaactacaacggcgtgtcggacgtggagctcagagtggcgcttccggacatc
acgacagtgaccgtccgggtcaaaaagaacagcaccacggaccaggtgtatcaggctgtt
gctgccaaagttgggatggacagcacaaccgccaactactttgccttgtttgaagtgatc
aatcactcttttgtgcggaagctggcgcccaacgagttcccccacaagctctacgtgcag
aactacacctcggccgtgccagggacctgcctgacgatccggaagtggctcttcaccacg
gaggaggaggtccttctgaacgacaacgacctggcggtcacctatttcttccaccaggct
gttgatgacgtgaagaaggggtacataaaagcagaggagaagtcctaccagctgcagaag
ctctgtgagcaacggaagatggtcatgtacctgaacatgttgcggacttgcgagggttac
aacgagatcatcttcccgcactgctcctgcgactcgcggcggaagggtcacgtgatcaca
gccatcagcatcaagcactttaaactccatgcctgcaccgaggagggtcagctagagaac
caggtaatagccttcgaatgggacgagatgcagcgatgggacaccgacgaggagggcatg
gcgttctgcttcgaatacgcgcggggggaaaagaagccacgctgggtgaagatcttcacc
ccttactttaactacatgcacgaatgtttcgagcgagtgttctgcgagctcaagtggcgg
aaagaggtggaggaagaggcgacagacaaggataacaagaactgcagtaaagacaacatg
tgcagcaagaacatctttcagatgatgcggacacagcacagagacattacgacttag
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