Podarcis raffonei (Aeolian wall lizard): 128403953
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Entry
128403953 CDS
T09310
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128403953 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128403953 (COPA)
Membrane trafficking [BR:
praf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128403953 (COPA)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128403953 (COPA)
Exosomal proteins of bladder cancer cells
128403953 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
128403953
NCBI-ProteinID:
XP_053225127
LinkDB
All DBs
Position
16:18636387..18670001
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDL
EKETIPEIDPHAQLLQPLAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGDEALAKSQEEGGGWEIEEDLDLPPELDVPGGPAG
EAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVVTFAPYKQLFL
QTYARGRTTYQALPSLPAMYGYPHRNWKDAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEE
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILTACEKNPSDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFHGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagactaagtcggcccgcgtcaaagggctgagctttcaccctaag
cggccttggatcttaacaagtctgcacaatggagtaatccagctctgggactaccggatg
tgtacactcattgacaaatttgatgaacatgatggccctgtcagagggattgatttccac
aagcagcagccactcttcgtgtctggaggggacgactacaaaattaaggtctggaattac
aagctgcgtcgctgtctcttcaccttgttgggccacttggattacatccgcaccacattc
ttccatcatgaatacccttggatcctgagtgcttctgatgatcaaaccattcgggtttgg
aactggcagtccagaacctgtgtttgtgtgctgactggacacaaccattacgtgatgtgc
gctcagtttcacccttcggaggacctagtggtatcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctgaggaagaagaacctctccccgggagccgtggagtcggac
gttaggggaatcactggagtagatctctttggcaccactgatgcagtggtgaagcacgtc
cttgaggggcacgaccgtggtgtgaactgggccgctttccaccccaccatgcccctcata
gtttcgggggctgatgatcggcaagtcaagatctggcggatgaacgagtcgaaagcctgg
gaggtagacacctgccgcggacattacaacaacgtctcttgcgccgtgtttcacccccgc
caggaactcatcctcagcaactctgaggacaagagcatccgtgtctgggatatgtctaag
cgcacgggagtccagactttccgcagggatcacgaccgcttttgggtgctggcagctcac
cccaacctcaacctctttgctgcaggacacgatggcggcatgattgtcttcaagctggag
cgcgagcgaccagcatacgctgtgcatggcaacatgctctactacgtgaaggaccgcttc
ctgcgacagctggacttcaacagctccaaagatgttgccgtaatgcagctgagaagcggc
tccaagttccctgtgttcaacatgtcctacaaccctgcagagaacgccgtcctcctctgc
acgagagccagtaatctggagaacagcacctacgacctgtacaccattcccaaggatgct
gattcccagaatcctgatgctcctgaagggaaacgctcctctgggctgacagctgtgtgg
gtagctcggaaccgctttgctgtcttggatcggatgcactcgattctgatcaagaacctg
aaaaatgagatcaccaagaaggtccaggttcccaactgcgatgagattttttacgctggg
actgggaacttgctgctgagagatgctgattccatcaccctctttgatgtgcagcagaaa
cggactctggcctctgtcaagatctccaaggtgaagtacgtcatctggtcggctgacatg
tcccacgtggctctcctggcaaagcacgccatcatgatttgcaacaggaagctggagtcg
ctttgtaacatccatgagaacatccgggtcaagagcggcgcctgggatgagagcggggtc
ttcatctacaccacaagcaaccacatcaaatatgccgtcaccaccggagaccacgggatc
atccgcaccctggacttgcctatctacgtgacgcgggtgaaggggaacaatgtctactgc
ctggatcgcgaatgccgcccccgagtcctgaccattgacccgacagagttcaagttcaag
ctggctctcatcaaccggaagtatgacgaggtgctccacatggtgcggaacgccaagctg
gtgggccagtccatcatcgcctacctccagaagaagggctaccctgaagttgcactccat
tttgtgaaagacgagaagactcggttcagcttggctctcgaatgtggcaacattgagatt
gctctggaggcagccaaagccttggatgataagaactgttgggaaaaactgggggaagtg
gccttgctccaagggaaccaccagatcgtggagatgtgttaccagcgcaccaagaacttt
gacaagctctccttcctgtacctgattacgggcaatctggagaaactgcgcaagatgatg
aaaatagctgaaatccggaaggacatgagcggccactaccagaatgccttgtaccttggg
gacgtggctgagagggtgaggatcctgaagaactgtggacagaagtccctggcctacctg
acagctgcaacccacggcttagatgaggaagcagagagcctgaaagagacctttgacctg
gaaaaggaaacgatcccagagatagacccccatgcacaattgctccagccgcttgctccc
atcatgcccctggacaccaactggcctctgctcactgtctccaagggcttttttgaaggc
acaattgccagcaaaggcaaaggaggtgcgttggctgctgacatcgatatagacacagta
ggcaccgaaggctggggagaagatgctgagctgcagctggatgaagatggctttgtagat
gctggggaaggttttggagacgaagccctggctaaaagccaagaggaaggaggtgggtgg
gaaatcgaagaggacctggatcttccccctgaactggatgttcctggtggtcctgctgga
gaggcagaagacggcttcttcgtgccgcccaccaaaggcaccagccctgcacaggtctgg
tgcaacaattcccagcttccagttgatcatatccttgctggctcttttgagacagctatg
aggcttctccatgaccaggtgggagtggtcacatttgccccctacaaacagctgttcctg
cagacctacgcccgggggcgcaccacgtaccaggctcttcccagcctccccgccatgtat
ggatacccccatcgcaactggaaggacgccggcttgaaaaacgccctcccggctgtggga
ctgaagctgaacgacttgatccagcggctgcagctgtgctaccagctcaccacagctggc
aagtttgaggaggccgtggagaagttccgctccatcctcttgagcgtgccgctgctggta
gtggacaacaagcaggagattgcggaggcccagcagctgatcgccatctgccgggagtac
attgtggggctgtccatggagattgagaggaagaagctgcccaaggagaccctggaagag
cagaagcgtatttgtgagatggctgcctacttcacccactccaacctgcagcccgtccac
atgatcctcgtccttcgcacagcgctcaacctcttcttcaagctcaagaacttcaagacg
gctgccaccttcgctcgccgcctcctggaactggggcccaaaccagaagtggctcagcag
acacgcaagatcctaaccgcatgcgagaagaaccccagcgacgcctaccagctcaactac
gacatgcacaaccctttcgacatctgcgccgcctcctaccggcccatctatcggggcaag
ccggtggaaaagtgtccgctcagcggagcttgctactgtcctgagtttcacggccagatt
tgcagagtcacaaccgtaacagagatcggtaaggatgtcattggcttaagaatcagcccc
ctgcagttccgctga
DBGET
integrated database retrieval system
