Podarcis raffonei (Aeolian wall lizard): 128404356
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Entry
128404356 CDS
T09310
Symbol
LRFN4
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128404356 (LRFN4)
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128404356 (LRFN4)
Cell adhesion molecules [BR:
praf04515
]
Immunoglobulin superfamily
SALM family
128404356 (LRFN4)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128404356 (LRFN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_5
fn3
Ig_VEGFR-1-like_5th
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
128404356
NCBI-ProteinID:
XP_053225862
LinkDB
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Position
16:17053853..17072547
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AA seq
691 aa
AA seq
DB search
MESLLLLLVQLLMVGRALAQVEGCPFHCVCQNLSESLSTLCANKGLLFIPPNIDRRTVEL
RLADNFIQVVEPPDFLNMTGLVDLTLSRNTIDTIRPFAFGDLESLRSLHLDGNRLTQIQE
EALRGMLNLQHLILNNNQLVDISVVAFDDFLMTLEDLDLSYNNLHRVPWEGIQGMLCLHT
LNLDHNLIDFIMEGAFAELYKLSRLDMTSNRLYTLPPDPLFARSQVGVISPTPYTSTIVL
SFGGNPLHCNCELLWLRRLVREDDMETCASPAQVAGRYFWSVPEEEFTCEPPLITRHTHK
LWILEGQRATLRCRAIGDPEPVIHWVSPDDKIMSNSSRTMSFRNGTLDILVTTIRDDGAY
TCIAINAAGESTATVDLKIIPLPHRGNGSITVLQQDPGSSDIATSAKTSANASEGGFEKR
VEVSDVTASSALVRWVADKSAYAAWMYQIQYNCTVDDTLIYRIIPATSRHFHLKHLVPSV
DYDLCVLAIFDDAATSLAATHLLGCAQFATREAYPDCHSLHAHFLGGTLTVIVGGIIVVT
LLVFTVVMMVKYKVCGSAHGSLPKVTNVYSQTNGGHPNGLLPLRTPPKERGPKHRRVRAK
AAQPERRTGDRVGGAAWGPPSTPAKTKRSNSLDMGDVSSSSCYSYAKRLSFMWTKRSQSV
HGMLAQCAASEGDAKRLGPFLNADELEESVV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcctgctgctgctgctggtccagctgctgatggtgggacgtgcgttggcccag
gtcgagggctgtcccttccactgtgtgtgccagaatctctccgagtcgctcagcaccctc
tgtgccaacaagggcctgctcttcatcccgcccaacattgaccgccggacggtggagctg
cggctggctgacaacttcatccaggtggtggagccgcccgacttcctgaacatgacgggc
ctggtggacctgaccctgtcacgcaacaccatcgacaccatccgcccctttgcctttggc
gacttggagagccttcgctcgctccacctggatggcaaccggctgacccagatccaggag
gaggccctgcgtgggatgctcaacctccagcacctcatcctgaacaacaaccaactggtg
gacatctcggtggtcgccttcgacgacttcctgatgaccctggaggacctggatttgtcc
tacaacaacctgcaccgggtcccctgggaagggatccaggggatgctctgcctccacacc
ctcaacctggaccataacctgatcgacttcatcatggaaggggcctttgccgagctctat
aagctctcccgcttggatatgacctccaaccgcctttacacactgccccccgatccactc
tttgcccgctctcaggtcggggtcattagcccgaccccatacacctccaccattgtgcta
agctttggcgggaaccccttgcactgcaactgcgagttgctgtggctgcgccgcctggtg
cgggaggacgacatggagacctgcgcctcccctgcgcaggtggcgggccgctacttttgg
tcggtccccgaggaggagttcacctgcgagccgccccttatcacccgccacacccacaag
ctctggatcttggagggccaacgggccaccctgaggtgccgggccatcggggaccccgag
ccagtcatccactgggtctcccctgatgacaaaatcatgtccaactcctcccggaccatg
tccttccgcaatggcacgttggacatcttggtgaccaccatccgggacgacggggcctac
acctgcattgccatcaacgctgcaggggagtccacggccaccgtggacctcaaaatcatc
cccttgccacaccgggggaacggcagcatcaccgtgctacagcaggacccaggctcctcc
gacattgccacttcggccaagacgtcggccaacgccagtgaggggggcttcgagaaaagg
gtggaggtgtccgacgtgacagccagctcagcgctggtgcggtgggtggctgacaagtcg
gcctacgctgcctggatgtaccagatccagtacaactgcaccgtggatgacactctcatt
tacaggatcatccctgccaccagccggcatttccacctcaagcacctggtgcccagcgtg
gattacgacctgtgcgtcttggccatctttgatgatgcggccacctccctggcagccaca
caccttttgggatgtgcccagtttgccacgcgggaggcctatccggactgccactcactg
cacgctcacttcctgggcgggaccctgacggtgatcgtagggggcatcatcgtggtcacc
ttgctggtcttcactgtggtcatgatggtgaagtacaaggtgtgtggcagtgcccatggc
agcctgcccaaggtcaccaacgtctactcgcagaccaacggtggacaccccaacggcctg
ctccccctgcgaacgccccccaaggagcggggccccaagcaccggcgggtgcgggccaag
gctgctcagcctgagcgcaggacgggagacagggtggggggagcagcgtgggggcccccc
agcacccccgccaagaccaagcgcagcaactccctggacatgggagacgtctcctccagc
tcctgctacagctacgccaagcgcctcagcttcatgtggaccaagcgcagccagtcggtg
cacgggatgctggctcagtgcgcggcctccgagggcgatgccaagcgcctcggacccttc
ctcaatgcggacgagctggaggaaagcgtggtatag
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