Podarcis raffonei (Aeolian wall lizard): 128404746
Help
Entry
128404746 CDS
T09310
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
praf03015
mRNA surveillance pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128404746 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
128404746 (NCBP1)
03015 mRNA surveillance pathway
128404746 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128404746 (NCBP1)
03041 Spliceosome [BR:
praf03041
]
128404746 (NCBP1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128404746 (NCBP1)
Spliceosome [BR:
praf03041
]
Common components
Common spliceosomal components
Cap binding complex
128404746 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
DUF1003
Vfa1
Motif
Other DBs
NCBI-GeneID:
128404746
NCBI-ProteinID:
XP_053226591
LinkDB
All DBs
Position
17:complement(7491877..7524739)
Genome browser
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPSKIEERLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKSKILRILCTVARLLPVKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECFKVNM
YNEAVVLVRFLSDLVNCHVIAAPSMVAMFENFIAVTQEEDVPQVRCDWYVYAFLSSLPWV
GKELYEKKDAEMDRILSQVENYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWAQVQKLK
KDRWQERHIPRPYLAFDNVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSAERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELF
QLPIPPHTEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHH
LNNFQFRWSWEDWSDCLSEDLDKPRPKFVREVLEKCMRLSYHQRIVDIVPATFSVLTPAN
PACIYKYGDESNKSLPGYNVALCLNIAIKNKASNDEIFTILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALGRFREVFKALAESDEGKLHVLRVTYEVWKNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSPELAHDFTRFYIWEILHSTIRKMNKHVVMIQKELE
EAKARLAKQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMILTEHLVRCETGGIDVITPWYKNCIERLQQIFLQHHQIIHQYMVTLENLLFTAELD
HHILAVFQQFCALQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcacagcgacgagaacgatggagggcagccgcacaagaggaggaga
acatctgagccatctaaaattgaagagcggctggaatccttaatatgcagagtaggagaa
aagagtacttcttctttggagagtaacttggaaggcctggctggggtcttggaggcagat
ttaccaaactacaaaagcaagatactaagaatcctttgtacagttgcccgtttgttacct
gtaaagctgacggtttacactactttagtcggcctgctgaacgcaaggaactacaacttt
ggcggagagtttgtagaagccatgatacgtcaactcaaagagtgtttcaaagtcaacatg
tataatgaagctgtggttttagtccgttttctgtctgatcttgtgaattgtcatgtaata
gctgccccatcaatggtggccatgtttgaaaatttcattgctgtgactcaggaggaggat
gtgcctcaggtacgctgtgactggtatgtgtatgcttttctctcatccttaccttgggtg
gggaaggagttgtatgagaagaaggatgctgagatggaccgcatcttgtcccaggttgaa
aactacctgaaacggcgtcaaaagattcacgtaccaatgctacaagtttggtctgctgat
aaaccacatccacaagaagagtacttggattgcctgtgggctcaggttcagaagctgaag
aaagaccgctggcaagaaaggcacatcccaaggccataccttgcttttgacaacgtgctc
tgtgaggcactgcagcacaatctgcctcccttcactccgccacctcacaccgaagactcc
gtttacccaatgccaagagttatcttcagaatgtttgactacactgatgatcccgagggt
cctgttatgcctggcagtcattccgctgaaagatttgtgatagaggaaaatcttcactgc
atcattaaatcacactggaaagaaaggaagacatgtgctgctcagttactgagctaccca
gggaataacaagatccctctgaactaccacatagttgaggtaatctttgccgagctgttt
cagcttcctattccaccacacactgaggtcatgtacacaacactccttattgaactttgc
aaacttcagcccggctccttaccccaagttcttgcacaagccacagaaatgctgtacatg
cgcctggatacaatgaacactacttgcatagacaggttcattaattggttttcgcaccat
ttgaataattttcaattccgttggagctgggaagactggtcagattgtctttctgaggac
cttgacaaacccagacctaaattcgtaagagaagttttggaaaaatgtatgagactttcc
taccaccaacgaatagtggatattgttcctgctactttttcagtcctaactcctgcaaat
ccagcatgtatttataaatacggagatgaaagcaacaagtctcttccaggatacaacgtt
gcgctctgcttaaacatcgccattaaaaacaaagcaagcaacgatgagattttcactatt
ttgaaggatgtgcccaaccctaatcaggatgatgatgatgatgaaggcttctcttttaat
cctttaaaaatagaggtgtttgtgcagacactgctgcatttggccgcaaagtcattcagt
cactccttcagtgctctgggaagattccgcgaagtcttcaaagcgctggcggaaagcgat
gaagggaagctgcatgtgctcagagttacgtatgaagtgtggaagaatcatccacagatg
attgctgtgctggtggataagatgattcgcacacagattgtggattgtgctgcagtagca
aactggattttctctccagagctggctcatgatttcactaggttttatatctgggaaatc
ttacactcaacaatccgtaagatgaacaagcacgtggtgatgatccaaaaggagctagag
gaggccaaagcgagattagccaaacagcacaaacgtcgagacagtgatgatgacgacgat
gacgacgatcgaagtagcgacagggaggatggacccctcgaagagcagatagaacgcctg
caagaaaaagttgaatcggctcaaagtgaacaaaaaaacctcttccttgtaatattccag
cgcttcattatgatcctcacggagcacttagtgcgatgtgaaacaggaggcattgatgtg
attacaccttggtacaagaactgtatagagaggctgcagcagatcttcttacagcatcac
cagatcatccatcagtacatggtgacgttggagaaccttctcttcacagcagaattggat
catcatatattggctgtatttcagcagttctgtgcattgcaggcctga
DBGET
integrated database retrieval system
