Podarcis raffonei (Aeolian wall lizard): 128404906
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Entry
128404906 CDS
T09310
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04110
Cell cycle
praf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128404906 (SMC1A)
04114 Oocyte meiosis
128404906 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128404906 (SMC1A)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128404906 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
128404906 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Mce4_CUP1
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
128404906
NCBI-ProteinID:
XP_053226950
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All DBs
Position
17:39611421..39641393
Genome browser
AA seq
1230 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFRRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEDGAEDRTFARVIVGSSSEYKINNKVVQLSEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEAEIEKLNK
ELGSKNKEIDKDKKRMDKVEDELKDKKKELGKVMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYIATSKQSLEEQKKLEGELTEEVELAKRRIDEINKELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKELKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDEAEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE
EAASSSQRTSNMYAREALIEIDYSDLSEDLKAEDEIKQEMNQLQQKLNEQQSILQRIAAP
NMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNSCFESVATNIDE
IYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFA
IHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGV
YPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgggctttctcaagctgatcgagatcgagaatttcaaatcgtacaaggggcggcaaatc
atcgggcccttccggcgcttcacggccatcatcgggcccaacggatccggcaagtcaaac
ctcatggatgccatcagctttgtgcttggcgagaaaaccagcaatctgagagtaaagacg
ttgcgagacctgatccatggagcccctgtagggaagccagctgccaatcgggcatttgtc
agcatggtttactctgaagatggtgctgaagatcgtacctttgcaagggtcatagtagga
agctcatcagagtacaaaataaacaataaagtggtacagctgagcgaatacagtgaggag
ctggagaaactgggcattctaatcaaagctaggaactttctagtcttccagggtgcggtg
gagtctattgccatgaagaaccccaaggagcgcacagcactctttgaggagatcagtcgc
tcgggggagctggctcaggagtatgacaagcgcaagaaggagatggtcaaggcagaagaa
gatactcagttcaattaccatcggaaaaagaacattgccgcagagcgtaaggaggctaaa
caggagaaagaagaggcagatcggtaccagcgcctgaaagacgaggttgtgcgagctcaa
gtccagctgcaactcttcaagttgtaccacaatgaagctgaaatagaaaaactgaacaag
gagctgggctccaaaaacaaagagattgataaggataagaagcggatggacaaagtggag
gatgagctcaaggacaagaagaaggagctgggcaaagtgatgagagagcagcagcaaatc
gagaaggagatcaaggaaaaggattctgagctgaaccagaagcgcccacagtacatcaag
gccaaggaaaatacgtcccacaagataaaaaagctggaagctgccaagaagtccttgcag
aatgcccagaagcagtataaaaagcgcaagggtgatatggatgaactggagaaggagatg
ctatctgtggagaaggcccggcaggagtttgaggaacgcatggaagaagagagccagagc
caaggccgggacctcacactggaggagaaccaggtgaagaaataccaccggctgaaggaa
gaggccagcaagcgagcagccacactggcccaggagctggagaaattcaaccgtgaccag
aaggcagatcaggaccgccttgatctggaggagaggaagaaagtagaaactgaggccaag
ataaagcagaaattgcgggagattgaagaaaaccaaaaacgtattgagaagctggaggag
tacattgctactagcaagcagtccttggaggagcaaaagaagctggagggggagctgacg
gaggaggtagagctggccaagcgccggatcgatgagattaacaaggagctgaaccaggtg
atggagcagctgggggatgctcgcattgaccggcaggagaacagccggcagcagcgcaag
gctgagatcatggaaagcatcaagcgcctctaccctggctctgtgtacgggcgcctaatt
gacctctgccagccgacccagaagaaataccagatcgctgtcaccaaggtcctgggcaag
aacatggatgccatcatcgttgattcagagaagactggccgggactgtatccagtacatt
aaggagcagcgaggagagcctgagaccttcctgccccttgactaccttgaggtgaaaccg
acagacgagaagctccgggagctgaagggagccaagttggtgattgacgtgattcgctac
gagccgcctcacatcaagaaggccctgcagtatgcttgcgggaatgcccttgtgtgtgac
aatgtggaggatgcccgtcgcattgcctttggagggcaccagcgtcacaagactgtagcc
ctggatgggaccctcttccagaagtctggggtgatctcaggaggtgccagtgacctgaaa
gccaaggccaggcgctgggatgaaaaggctgtggacaagctgaaagagaagaaagagagg
ctgacagaggagctaaaggagcaaatgaaagccaagcggaaggaggcagagctgcgccaa
gtccagtcccaggcccatggcttgcaaatgcgtctgaaatactcccagagtgacttggag
caaaccaagacccgtcatcttgctctcaatctccaggaaaagtccaagctggaaagtgaa
ttggccaactttgggccccgcatcaatgacatcaaacgtatcatccaggggagggagcgt
gagatgaaggaactcaaggagaagatgaaccaggtggaagatgaggtatttgaggagttc
tgccgggagattggggtaaggaacatcagggagtttgaggaggagaaagtgaaacgccag
aacgagattgccaagaaaaggttggagtttgaaaaccagaagacccgtctgggcatccag
ctggactttgagaagaaccagctgaaggaggatcaggacaaagtgcacatgtgggagcag
acggtcaagaaagatgaagctgagatagagaaactcaagaaggaggaacagcggcacatg
aagatcattgatgagaccatggcacagctgcaggacctgaagaaccagcacttggccaag
aaatctgaggtgaacgacaagaaccatgagatggaggagattcggaagaagctgggcggg
gccaacaaggagatgactcacttgcagaaggaagtgacagccattgagaccaagctggag
cagaagcgcagtgatcgccacaatctgctgcaagcctgcaagatgcaggacatcaaactg
cccctctctaaaggcaccatggatgatataagtcaggaggagggtggctcccagggggag
gaggcagccagcagctcacagaggacttccaacatgtatgcgcgagaagctctcattgag
attgactacagtgacctctctgaggacctgaaggctgaagatgagatcaagcaggagatg
aaccagctgcaacagaagctgaatgagcagcagagcattttgcagcggattgctgctcct
aatatgaaggcaatggagaagctggagagtgtgcgggacaagttccaggagacctctgat
gaattcgaggctgcccggaaacgtgccaagaaagccaagcaggcatttgaacagataaaa
aaggagcgctttgaccgcttcaactcctgctttgagtcagtggccaccaacatcgatgag
atctacaaagccctgtcacgaaatagcagtgcccaggccttcctaggccccgagaaccca
gaggagccttacttggatggcataaactacaattgtgtagcccctggcaagcgcttccgg
cccatggacaacctgtctggtggggagaagacagtggcagccttagctctactttttgcc
atccacagctacaaacctgctccattttttgtcttggatgagatcgatgctgctttggac
aacaccaacattgggaaggtggccaattacatcaaggagcaatctacgtgcaacttccag
gccattgttatttccttgaaggaggaattctacaccaaggccgagagtctcattggtgtc
taccctgagcaaggagactgtgtcatcagcaaagtcctgacctttgacctcaccaagtat
ccggatgccaatccaaaccctaatgagcagtaa
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