Podarcis raffonei (Aeolian wall lizard): 128404912
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Entry
128404912 CDS
T09310
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04144
Endocytosis
praf04517
IgSF CAM signaling
praf04530
Tight junction
praf04810
Regulation of actin cytoskeleton
praf05100
Bacterial invasion of epithelial cells
praf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128404912
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128404912
09144 Cellular community - eukaryotes
04530 Tight junction
128404912
09142 Cell motility
04810 Regulation of actin cytoskeleton
128404912
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128404912
05100 Bacterial invasion of epithelial cells
128404912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128404912
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128404912
Membrane trafficking [BR:
praf04131
]
Others
Actin-binding proteins
Arp2/3 complex
128404912
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128404912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Rax2
EIF3I
Beta-prop_SPT8
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
128404912
NCBI-ProteinID:
XP_053226968
LinkDB
All DBs
Position
2:complement(5085990..5087602)
Genome browser
AA seq
372 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDQTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNRHTTGIDW
APKSDHIVTCGADHNAYVWSQKEGVWKPTLVILRINRAATFVKWSLLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEADEKP
ASTPWGSKMLFGQLTAEFGGAGSGGWVHSVSFSASGNRLAWVSHDSTVSVADAPKNMMIS
QLKTEFLPLLXVSFVSENDSSVVAAGHDCCPMLFSCDDHGTLTFVSKLDIPKQSIQRNIS
AMERFRNMDKRATTEDHNTTLETLHQNSITQVSIYEVDKRDCRKFCTTGIDGAMTIWDFK
TLESSIQGLQIM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcaccagttcttactagagccaataacctgtcacgcctggaacagggaccaa
actcagattgccattagccctaataatcatgaagttcacatctataagaagagtgggaac
cagtgggtgaaagctcatgagctcaaagagcacaatagacacaccacaggcattgactgg
gcccccaagagcgaccacattgtcacttgtggtgctgaccataacgcttacgtctggagt
cagaaggaaggagtgtggaagccaacactggtgattctgaggatcaaccgagcagccacc
tttgtgaagtggtctcttttggagaacaaatttgctgttggaagtggagctcgactcata
tctgtgtgctactttgagtctgaaaatgactggtgggtgagcaagcacattaagaagccc
attcgctccactgttcttagcctagattggcaccccaacaatgttctgcttgcagcagga
tcctgtgatttcaaatgcagagtgttttcagcttacattaaggaagcggatgagaaaccg
gccagcacaccctggggatccaaaatgctctttgggcagctgacggctgaatttggtggt
gcaggaagtggtggttgggtccacagcgtcagtttttccgccagtggcaaccgccttgcc
tgggtcagccatgatagcactgtgtcggttgcagatgcccccaaaaacatgatgatctcg
caattgaaaacagaattcctcccattgctgnnagtgtcgttcgtctcggagaacgacagc
agtgtggttgctgctggccatgattgctgcccgatgctcttcagctgtgacgaccatggt
accctcacctttgtctccaagctggacattcccaagcagagcatacaacgcaatatttcg
gccatggaacgtttccgcaacatggacaagagagccactacagaggatcacaacactact
ttggagacgctgcatcagaacagcatcacccaagtgtctatttatgaggtggacaaacga
gattgccgcaagttctgcaccactggtattgatggagcaatgaccatctgggacttcaag
acattagagtcctcgatccaggggctgcagatcatgtaa
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