Podarcis raffonei (Aeolian wall lizard): 128405158
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Entry
128405158 CDS
T09310
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
praf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128405158 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128405158 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128405158 (ABCA1)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128405158 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128405158
NCBI-ProteinID:
XP_053227453
LinkDB
All DBs
Position
17:complement(12142662..12247432)
Genome browser
AA seq
2258 aa
AA seq
DB search
MVFWTQLGLLLWKNFTYRRRQTFQLLIEIIWPLLIFFILISVRLSFPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGIVGNFNKSIVSRLFSDAKRLLLYSQKDT
SIKDAQKVAGKLQKVGRTISGVKVRDFLVDNETFSDFLHHNASLPKFVVDEILNAEVNLQ
QVITSGYRISVKDLCNSTKLSKFVNIQNPVVDVLSSALICSIPKEKLSAAERVFQDNLDV
MKPFMKGIASNSTLQDLKETTETFMESLGKLLRELGSMKSWSDMRQEVVFLTNVNSTSSS
TEIYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGGNSTDEDAADFYDNYTTPYCND
LMKKLESSPLSRIIWRALKPLLMGKVLYTPDTPATRAVMSEVNKTFQELSVFRDLGGMWE
EIKPKIKVFMEESQEMDLVRTLLKNKFLWKHHLMGSSWTVEDLSLFLAKNLEDVHPVNGS
TRTWREAFNETDHAVLTISRFMECVNLDKLEAMPSEVRLIDKSLELLDQRRFWAGIVFPE
ITPSSVKLPQHVKYKIRMDIDSVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVI
EQAIIRTVTGSEKKTGVYVQQMPYPCYVDDVFLRVMSGSMPLFMTLAWIYSVAVIVKGIV
YEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLMSAGLLTLILKKGNLLPYSDPSVVFV
FLSIFGIVTITQCFLISTFFSRANLAAACAGIIYFTLYLPCTLNFAWHDYMTFSLKTFAS
LLSPVAFGFGSEYLSLFEEQGVGLQWNNVFMSPLEGDSYNLTTSVCMMLFDSLLYGVLTW
YIEAVFPGQYGIPRPWYFPFTKSYWCGEESGEQQTPSLHKNSSEICMEEEPSHLHLGVSI
QSLVKVYRDGKKLAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILG
KDIRSELSTIRKNLGVCPQHNVLFDELTVEEHIWFYARLKGLSEKLVKKEMKQMAIDVGL
PHKLKSKTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLVKYRQGR
TIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSY
RNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIMKHVPEARLVEDIGH
EITYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDHGVDAETS
DGTLPARRNRVFGDRQSCLRPFTEDDAFDPNDSDVDPESRETDLLSGMDGKGSSQIKGWK
LMQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALIFSLIVPPFGKYPSLELQPWM
YDQQYTFISNDAPEDTGTQKLLDALLNKPGFGTRCMEGYSIPNTPCSVGEEGWTTDPVPE
ELMEIFQNGNWTMENPSPSCVCSNEKVKKMLPVCPAAAGGLPPPQRVLNTTDILQNLTGR
NISDYLVKTYAQIIGKSLSNKFWVNEFRYGGFSLGASSSLVLPRREEVNEAIKQVKKILE
IAKGGSGERFLNSLSSFMKGLDTNDNVKVWFNNKGWHAISAFLNIMNNAILRANLQEGED
PSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVTK
AKHLQFICGVKPVTYWLANFVWDMCNYVIPATLVIIIFIGFQQKSYVSSSNLPVLALLLL
LYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTSNKLTNINDIL
KSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVF
FLITVLIQYRFFIKSRTGNAKLPPVHEEDEDVNRERQRIIGGGGQSDILEIKELTKVYRM
KRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFLKGNSILSNIQD
VHQNMGYCPQFDAINELLTGREHLELFALLRGVPEKEVCKVGEWAVRKLGLVKYAERCAG
TYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHS
MEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIIVRIAGANPDLKPVQDFFELAF
PGSVLKEKHCNMLQYQLPSSQSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAKD
QSDDDHTKDLSLHKNQTVVDVSLLTSFLKDEKVKESYV
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atggtgttctggacacagcttggtttgctgctatggaaaaatttcacctataggagaagg
caaacgttccagctgctgattgaaatcatttggcctttacttatcttctttatattgatc
tctgtacggctatcgtttccaccctatgaacaacatgaatgtcattttccaaacaaggcc
atgccttcagctggaacgttgccatgggtccaagggattatttgcaatgccaacaatccc
tgcttccgctacccaactcctggagagtcaccgggcattgttggaaattttaacaaatct
atcgtttcccgcctgttctctgatgccaaacgattgctactgtatagccagaaagacacc
agcattaaggatgcacagaaagtcgcagggaaactgcagaaagttgggaggactatttca
ggtgtgaaagtccgggatttcctggttgacaatgagaccttctctgactttctccatcac
aatgcctccctaccaaagtttgttgtagatgaaatcctgaatgccgaggttaacctccaa
caggtcattacatctggctaccggataagtgtgaaagacctttgcaattcaaccaagctg
tcaaagtttgtcaacatccaaaacccagtggtagatgttctcagcagtgccttgatttgc
tccattcctaaggaaaagctttctgctgcagagagagtgtttcaggacaatctagatgtc
atgaagccatttatgaaaggaattgcctccaactccactcttcaggatctcaaggaaacc
acagagactttcatggagagccttgggaagctccttagggagctcgggagcatgaaaagc
tggagcgacatgaggcaggaggtggtgttcctaaccaatgtgaacagcacaagttcttct
accgaaatttaccaggcggtatcccgaatagtttgtggacatcctgagggagggggattg
cagatcaagtctctcaactggtatgaagacagcaactacaaagctttgtttggaggcaac
agcactgacgaagatgctgccgatttctatgacaactacacaacaccctactgcaatgac
ctcatgaagaagctggagtccagcccactttccagaatcatatggagagctctgaaacct
ttgcttatggggaaggtcttgtacacccctgacacgccagcaacaagggcagtcatgtct
gaggtaaacaagacgttccaggagctgagtgtcttccgtgatcttggagggatgtgggag
gagataaaaccaaagataaaagtgttcatggaggaaagccaggaaatggatctagttcgg
acgttactgaagaacaagttcctttggaaacaccacttaatgggttcaagctggaccgta
gaagatctatccctgttcttggcaaagaacctggaggatgtccatccggtgaatggctca
acccgcacctggagggaagctttcaatgaaactgaccatgctgttctgactatttcccgc
ttcatggaatgtgtcaatctggacaaactggaagccatgcctagtgaagtgcggcttatc
gacaagtccctggagctgctggatcagaggaggttttgggcaggcatcgttttccccgaa
atcactcctagcagcgtgaagttgccgcaacatgtcaagtacaagataaggatggacatc
gatagcgtggagagaacaaacaaaattaaggacgggtattgggacccaggtcctcgggct
gatccttttgaggacatgcgctacgtctggggaggctttgcttacttgcaggatgtgata
gagcaggccatcatccgtactgtgaccggctccgagaagaaaacgggagtctacgttcag
cagatgccctacccctgttatgtggatgatgtattcttgcgtgtcatgagcggctccatg
cccctcttcatgactctggcttggatctactctgtggccgtgatcgtcaagggcattgtg
tacgaaaaggaggcccgcctgaaagagaccatgaggattatgggcctaaacaacggcacc
ctctggctcagctggttcattagcagcctcatcccccttctcatgagcgctgggctcctg
acgctcatcctcaagaaaggaaacctgctgccttacagtgaccccagtgtggtgtttgtc
ttcctgtctatctttggcatagtgaccataacacagtgcttcctcatcagcacctttttc
tcaagggccaacttggcggcagcttgtgcggggatcatctactttactctctacttgcct
tgcacgttgaattttgcctggcacgattacatgaccttctctctcaaaacgtttgcgagc
ctgctttctccggtcgcctttgggtttggcagtgagtacctttccctgtttgaagagcag
ggtgttgggttgcaatggaacaatgtcttcatgagccctttggaaggagacagctacaac
ctgacaacttctgtgtgtatgatgctgttcgatagtctgctgtatggggttctgacttgg
tacatcgaggctgtctttccaggtcaatacggcatccccagaccctggtactttcccttt
acgaagtcctactggtgtggtgaggaatctggagagcaacagaccccttctcttcacaaa
aattcatctgaaatctgcatggaagaagagccaagtcatcttcaccttggggtgtcgatt
caaagcctggtgaaggtttaccgtgatggcaagaaactggctgtcgacggccttactctg
aatttctacgaagggcagattacctccttcctgggacacaacggagctgggaaaaccacc
acaatgtccatcctgactgggttattccccccaacttcgggcacagccttcatccttggc
aaagacatccgttctgagctcagcaccatccggaagaatctgggtgtctgcccccagcac
aatgtcctgtttgatgagttgacagtggaggaacacatctggttttatgcgcgcctgaag
ggactgtcggaaaagctggtgaaaaaggaaatgaagcagatggccatagatgttggtttg
cctcataaactcaaatcaaagacaagcaaactctctggtggtatgcagagaaagctttcg
gtggctttggcctttgtaggcggctctaaggttgtgattctggatgagccgacggctggc
gttgacccttattctcgcagagggatctgggagctgcttgtgaaatatcgccaaggtcgc
accatcatcctctccacacaccatatggacgaggcggacatcctcggagaccgaattgct
atcatttctcacggcaaactgtgctgcgttggctcttctctgttcctgaagaaccagttg
gggactggatattatctgaccttagtcaagaaggacgtggattcctcactcagctcctac
aggaacagtagcagcaccgtgtcttacctgaaaaaggatgacagtgtgtctcagagcagt
tcagatgctggacttggcagtgaccatgaaagtgacaccttgacaatagatgtttctgca
atttctaatctcattatgaagcatgtccctgaagccaggctggtggaagacattggccat
gagataacttatgttctgccctatgaagccgctaaagagggagcttttgtggagttgttt
catgagattgacgaccgcctctctgaccttggcatttccagctatggcatctctgagacg
actctggaagagatatttctcaaagtggcagaggaccatggtgtggatgcagaaacctca
gatggcacgttaccagccagaagaaaccgcgtctttggagaccggcaaagctgcctccgt
ccattcacagaagatgatgcttttgaccccaatgattccgacgtggacccagaatcccga
gagaccgacctgctgagtgggatggatggcaaaggatctagccagatcaagggctggaag
ctgatgcagcagcagtttgtagctctgctatggaagaggctgcttattgccaaacgcagc
aggaaaggtttctttgcccagattgttctcccagcggtcttcgtctgcattgctcttata
ttcagtttgattgtgcctccctttggtaaatatcccagcttggagttgcaaccatggatg
tatgatcagcagtacacgtttatcagcaatgatgctccagaagacactggaacccagaag
cttttggatgctctcctcaacaaacctggtttcggtacccgctgcatggaaggatactcc
attccgaatactccttgctcagtaggcgaagagggctggaccactgatcctgtgcctgag
gaattgatggaaatcttccagaacggcaattggactatggagaacccctctccatcgtgt
gtctgtagcaacgagaaggtgaagaagatgctcccagtttgccctgctgcagctggtggt
ctccctcctccccagagagtactgaacactacagatatcctgcaaaacctgacaggtcgc
aacatttctgattacctggtgaagacctatgcacagatcattgggaaaagtttgagcaat
aagttttgggtgaacgaattcaggtatggtggcttttcattgggagccagtagctctctg
gtgctccctcgccgtgaagaagttaatgaagcaatcaagcaagtgaagaaaatcttggaa
atagccaaggggggctctggagaacggttccttaacagcctgtcgagcttcatgaagggc
ttggacacgaatgataatgtaaaggtgtggttcaacaacaaaggctggcacgccatcagc
gcctttctcaacataatgaacaatgccattctgcgcgccaacctgcaagagggagaggac
cccagcgcttacggcatcacggccttcaaccaccctctgaacctaaccaagcagcagctc
tcggaagtcgccttgatgacgacatcggtggatgttttggtctccatctgcgtcatcttt
gccatgtcctttgtcccggccagctttgtggttttcttgatccaggagcgtgtcactaag
gccaagcacctccagttcatctgtggcgtgaagccagtgacctactggctggctaatttt
gtgtgggatatgtgcaactatgtaattccagccaccttggtcatcatcatcttcattggc
ttccagcagaaatcctacgtgtcctcaagcaaccttcccgtgctggctcttctcctcttg
ctctatgggtggtccataacgcctctcatgtacccggcatcctttgtgttcaagatccct
agcacagcatacgtggtgctcaccagtgtgaacctcttcatcggtattaatgggagcgtc
gccacttttgtcctcgagcttttcaccagcaacaagctgaccaacatcaatgacatcctg
aagtcggtattcctcatcttcccccatttctgcctgggccggggcctgattgacatggtg
aaaaatcaagctatggcagatgccctagaaagatttggtgagaaccgctttgtctctcct
ctctcctgggacctggtgggacggaatctttttgccatggctgttgaaggcgtcgtcttc
ttcctcatcactgtgcttatccagtacaggttctttatcaaatccagaactggcaatgct
aagctgccgcctgtgcatgaagaggatgaggacgtgaacagagaacggcagaggatcatt
ggtggcggtgggcagagcgatatcttagaaatcaaagaactaaccaaggtatacagaatg
aaacgaaagcctgctgtggataggatctgtgttggaattccacccggagagtgctttgga
ctcctgggtgtgaatggtgctggcaaatcctccactttcaagatgttgacaggagacacg
gatgttacgggaggagatgctttccttaagggcaacagtattttgtctaacatccaagac
gtccaccagaatatgggatactgccctcagtttgatgccataaacgagctgctgacgggg
agagaacacctggaattatttgcactcttaagaggcgtccctgagaaagaagtctgcaag
gttggtgaatgggctgttcgcaagctgggccttgtgaagtatgcagaaagatgcgccggc
acctacagcggtgggaacaagcgcaagctgtcaactgccatggccctaatcggagggcct
cctgtggtgttcctggatgagccgaccacaggaatggaccccaaggcccgtcgtttcctt
tggaactgcgccttgagcgtcatcaaggagggaaggtctgtggtccttacatctcacagc
atggaagaatgtgaggccctgtgcactcgaatggcgatcatggtcaatgggcggttcagg
tgccttggcagtgtccagcacctgaagaacaggtttggagatggctacacaatcatagtg
cgaatagcaggggcaaaccctgacctgaagcctgttcaagacttctttgagctcgccttc
ccgggcagtgtgctgaaggagaagcattgcaacatgctgcagtaccagctgccctcctct
cagtcttctctggctcggatatttagcatcctctcccagaacaaaaagagactccacata
gaagactactccgtttcacagaccacacttgaccaagtatttgtaaacttcgccaaggac
caaagcgatgacgaccacacaaaggacttgtcgttgcacaaaaaccagactgttgtagac
gtctcacttctgacttcctttttgaaagatgaaaaggtgaaagaaagctatgtatga
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integrated database retrieval system
