Podarcis raffonei (Aeolian wall lizard): 128405195
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Entry
128405195 CDS
T09310
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128405195 (TRPC4)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128405195 (TRPC4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128405195
NCBI-ProteinID:
XP_053227520
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Position
17:complement(29824028..29894294)
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AA seq
968 aa
AA seq
DB search
MAQFYYRRSVSAPYRDRIPLRIVRAESELSPPEKAYLNAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKR
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIVKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLISLSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQNGNELARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVIIGFLFPVFSICYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLLPRQSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNDANRCKGIRCENQNNAFSTLFETLQSLFWSVFGLINLYVTNVDARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIRWLWRQVFRKKIRKKPESFGTIGRRAADNLRRHNQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKLSNLQSSKVSREESSLPESDEG
NENGGDEKIKKRNLSLFDITSMIHPKAVARASEAHSHSNGSAMMTRVSSKEKQRKVNFVS
DVKKLGFFHRQSKSAEQRTSIYSISEEVSRQQADECEKTPEMGVKALVVNCELNIRDLSE
SCTAGTHNQARNEALDSKVDEKVAASEMKKANLPTPKDSPDNEQDFSSSDSVVKQETIVQ
DNYLTTRL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctattatagaagaagcgtcagtgccccttaccgagatcgaatcccgcta
cgcattgtacgagctgagtctgaactctcacctcctgagaaagcctatttgaatgctgtg
gaaaaaggagattatgccagtgtgaagcaagccctggaagaagcagagatatatttcaag
atcaatattaattgcattgacccccttggaagaacggctcttcttattgcaatagaaaat
gagaacctggagctcatagagctacttttgagctttaacgtctatgttggggatgctttg
ctacatgccatcaggaaagaggtagttggagctgttgagctgctgctaaaccacaagagg
cccagtggggagaaacaggtaccacccatccttttggataaacaattctcagagtttaca
ccagacatcacacccattatcctggctgcccatacaaacaattatgagatcgtaaaactt
ttagtacagaaaggtgtttctgttcccagaccgcatgaagtccgctgtaactgtgtggag
tgtgtctctagctcagatgtggacagccttcgccattcccgatccaggctcaatatctac
agagctctttcaagtccatctttgatttccctgtcaagcgaggatccttttcttacagct
ttccaattaagttgggaacttcaggaactgagcaaagtggagaatgagtttaaatctgaa
tatgaagaactatcacagcaatgcaagcaatttgcaaaagacctcttggatcagacacgg
agttccagggaacttgaaattattcttaactacagagatgataacagtctaatagaagag
cagaatggtaatgaacttgcaagactcaaactggcaattaagtaccgtcaaaaagagttt
gttgcccagccaaactgccaacaactgcttgcctctcgctggtatgatgagttccctggc
tggaggaggcgccactgggccgtgaagatgttgacttgcgtcatcattggatttcttttc
cccgtcttctctatctgctacctgatagctcccaagagcccactgggtctgttcatcagg
aagccattcatcaaatttatctgccatactgcatcctacttgactttcttgttccttctg
ctgcttgcctctcagcacattgacaggtcagatctgaacatgcagggacctccaccaacc
atcgtcgaatggatgatattaccgtgggtcctggggtttatctggggtgaaattaaacaa
atgtgggatggcggcctgcaggattatattcatgactggtggaacctgatggattttgta
atgaactcattgtacctggcaacaatatctttaaaaattgttgcattttcaaagtacagt
gggctgctcccaagacagagctgggatatgtggcacccaacactggtggctgaggcactg
tttgctattgcaaacatctttagttctctgcgcctgatctcattattcactgcaaattct
catctgggaccattgcagatctctcttggaagaatgttactggacattttaaagtttctt
ttcatctactgtcttgtgctgctagcttttgcaaatggacttaaccagctatatttctat
tatgaaacaaatgatgccaatcgctgtaaagggattcggtgtgaaaatcaaaataatgca
ttttcaactttgtttgaaactctccagtcactgttttggtccgtgtttgggctcatcaac
ctttatgtgaccaatgtagacgcaagacatgaattcactgagtttgttggggccaccatg
tttgggacctacaatgtcatctctctggtcgtccttctcaacatgttgatagccatgatg
aacaattcctatcagctcattgctgatcatgcagacattgaatggaaatttgctcgaaca
aaactttggatgagttactttgaagaaggagggactctgcctactccgtttaatgtcata
ccaagtcccaaatctctctggtacctgatcagatggctgtggagacaagtgttcaggaaa
aaaatcagaaagaaacctgaaagttttggaacaattgggaggcgtgcagctgataatttg
agaaggcataatcagtatcaggaggtcatgagaaatctggttaagagatacgtggctgca
atgataagagatgctaaaactgaagaggggttgaccgaagagaattttaaggagttaaag
caagatatttccagtttccgctttgaagtcctgggtttgttaaaaggaaacaagctgtct
aacttacagtcctcaaaagtcagcagagaagagtcctctttgccggaatctgatgaagga
aatgaaaatggaggagacgagaaaattaagaagagaaaccttagcctttttgacataact
tcaatgattcaccccaaagcagtggcaagagcctctgaagcccacagccacagcaatggg
tcagccatgatgacaagagtttcctccaaggaaaagcagaggaaagtgaattttgtgagt
gacgtgaagaagcttgggttctttcatagacaatccaaaagtgctgagcaaaggaccagt
atttactcgatttctgaagaagtttcccgccaacaagcagacgaatgtgagaaaactcct
gaaatgggagtgaaagcattggttgtgaactgtgaactcaacattcgggatctcagcgaa
agctgcaccgcaggcactcataatcaggccagaaatgaggcgctggactcaaaggtggat
gagaaagttgctgcttctgaaatgaagaaggctaatttgcccacaccaaaggattctccg
gacaatgagcaggacttcagtagtagtgactctgttgtgaaacaagaaacaattgttcag
gacaattacctgacaacaagattgtga
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