Podarcis raffonei (Aeolian wall lizard): 128405226
Help
Entry
128405226 CDS
T09310
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03083
Polycomb repressive complex
praf04980
Cobalamin transport and metabolism
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128405226 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128405226 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128405226 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
praf01009
]
128405226 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128405226 (HCFC1)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128405226 (HCFC1)
Protein phosphatases and associated proteins [BR:
praf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128405226 (HCFC1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128405226 (HCFC1)
HMT complexes
COMPASS/SET1 complex
128405226 (HCFC1)
MLL-HCF complex
128405226 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128405226 (HCFC1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128405226 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
128405226
NCBI-ProteinID:
XP_053227613
LinkDB
All DBs
Position
17:complement(38976044..39001117)
Genome browser
AA seq
2202 aa
AA seq
DB search
MAAASAIVPSGGSPTGGGTTPGLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGG
NEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLY
ELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLN
DLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGD
LWTLDIESLTWNKPTLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWK
CTNTLACLNLDSMAWEPILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQV
CCKDLWYLETEKPPSPSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAATSPAAN
PVPSVPVNPPKSPAPAAAAPVPTVQPLAQMGITLLPQTTAVAAAAGAVAAAAAAPPTTTT
IQVLPTVPSSPMPVPAAAATAAAATPRPQAVPAVLKVTGPQATTGTPLVTVRSAGQAGKG
PVTVTSLPAGVRMVVPTQNTQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTMLSVPA
GTTLVKTVAVSPGTTTLPTTVKVASSPVMVSNPATRMLKTAAAQVGTSVSSSTTNTPTRP
IITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKP
VQTSAVTGQASSGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITSSQAGGTGTKPTIL
GISSVSPNTTKPGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGTP
AKIITAVPKLTTSHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTT
LVVKGTTGVTTLGTVTGTVSTSLAGTGGHNTNASLATPITTLGTIATLSSQVINPAAITV
SAAQTTLTAAGGLSTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTMEQPT
ATVAIAESGQGDAQPGTVTLVCSNPPCETHETGTTNTATTTVVGTLGGPTQVQFVCEGQE
GGGLQPNGRVVRVCSNPPCETHETGTTNTATTVRSAGQKVCSNPPCETHETGTTNTATTS
RIEKTTADPPCQTFQTSATSTTMTVKPIVGTGQLVCSNPPCETHETGTTNTATTATSNMG
RGQPDGEQKEPTNPPCQTKQTNTTSTTMSAKADVPTEQPCAVRMVSFTSASGVPSVASGT
TTTVQASERLPAPKSLQCESHHTHTTNTATTARSLMGRGQPDGEWVGSANPPCQTQQTCS
TSTTMSAKADLPTKQLCTVQMALPDSGSTLPPSSTLCETSKTGAKDSGPQVCSNPPCETH
ETGTTNTATVSTSNQGTSQPLCSNPPCETHETGTTNTSTTATSSMGVGQQVCSNPPCETH
ETGTTNTATTTTSNMGAGQGEGAGQTPSAPPCETQQTSSTSTTMTSSTGGDGTHISSSTS
LPVGGSESGKAPEGESPGTEGLPLQNPTTRVCSNPPCETHETGTTHTATTVTSSMGANQD
QPPATNGQQGEPESTVTESPAASSPSTVTTTVASTLPRAVTTVTQSTPPPGPSVPNISSL
ADTPAEEASPPAETPAATSTDSLTGASEPLQPPAEMQAAASEPQEQIHAAPTAGTPPVEA
APQPELPAPVVEAPAAPAAPAREPVTMVVVPQVTPAAAPAPPPPPPAPAPPSEVEQLALP
QELMAESQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMG
PGEAMDTSEAAATQAELSHLASESPEGQATAIPIVLTQQELAALVQQQHQLQEAQAAAVA
AAAAAAQQQPPQHPLPSHLPTEALAPADSLNDPASESNGLNELASAVTSTVGLLPPTPTE
SLAPSNTFVAPQPVVAAASPAKLQAAAALTEVANGIEAAPVKPEPPTQPPKVVVKKENQW
FDVGVVKATNMMVTHYFLPPDDAPATEDDSGTIPDYSQLKKQELQPGTAYKFRVAGINAC
GRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQSA
QAGEPKSAAPAQLAFMRVYCGPSPSCLVQSASLSNAHIDYTTKPAIIFRIAARNEKGYGP
ATQVRWLQESSKDGSMIKPANKRPLSSPDLKTAPKKPKADGQ
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcctctgctattgtccctagtgggggctccccaacaggtggcgggaccacc
cccgggctgctccagccccgctggaagcgggtggttgggtggtcaggccccgtgcctcgg
ccccgacatgggcacagagctgtggccatcaaagagctgattgtggtcttcggagggggc
aacgagggcatcgtggatgagttgcatgtctataacacagctacaaaccagtggttcatc
ccagctgtgcggggagacatccctcctggttgtgcggcctatggcttcgtttgtgacgga
acccgtctgctggtatttggggggatggtggagtatggcaagtacagcaacgacctctat
gaactgcaggccagccgttgggagtggaagagattgaaagccaagactcctaagaatggg
cccccaccctgcccacgacttggccatagcttctcattggtgggcaacaaatgctacctg
tttgggggcttggccaatgacagtgaagaccctaagaataacattcccaggtacctgaat
gacctctatatcttggagctacgaccaggctctggtgtggtagcctgggacatccccatc
acttatggtgtactgcctccgccacgggagtcccacactgctgtggtgtacacagagaag
gacaacaagaagtccaaactagttatatacggtggcatgagtggttgtcgtcttggtgac
ctctggacccttgacattgaatctctaacgtggaacaagcccaccctgagtggggtggct
cccctcccacgcagtctgcattcagccacaactattgggaacaagatgtatgtatttgga
ggctgggtaccccttgtcatggatgatgtcaaagtggcaacacatgagaaggaatggaaa
tgcacaaataccctggcctgcctcaacctcgactccatggcttgggagcccattctgatg
gacacactagaggacaatattccacgggccagagctgggcactgtgctgtggctatcaat
acccgcttgtacatctggagtggccgcgatgggtaccgcaaagcttggaataaccaggtt
tgctgcaaggatctatggtaccttgagacagagaaacctccatcgccttcacgggtgcag
ctggttcgtgccaacaccaattccctggaagtgagctggggctctgtcccaacagctgac
acttacctgttgcagctccagaagtatgacatcccagctgccacctcgccagctgccaat
cctgtgccctcagtgcctgtcaacccccccaagagccccgctccagctgcagctgcccct
gtccccacagtgcagcccctggcgcaaatgggcattaccctgctgccccagactacagct
gttgcagctgctgctggtgccgtggctgctgccgccgccgccccacctaccacaaccacc
atccaggtgctgcctactgtgcctagcagcccaatgcctgtgcctgctgctgctgccacc
gccgccgccgccactcctcgtcctcaagctgtcccagctgtgctgaaggtgacaggccca
caagctactacagggactccattggtgacggtgcgttcagcagggcaggctgggaagggg
cctgtgacagttacttcactgccggccggggtgcgtatggtggtacccacgcagaacact
caagggacagtgattggcagtagcccccagatgagtggcatggctgctctggcagctgct
gctgctgccactcaaaaaattccaccatcttcagcccctacaatgctgagtgtgcctgct
ggcacaaccctagttaagactgttgctgtttcgccgggaaccaccacgctacccaccaca
gttaaagttgcctcttctcccgtcatggtgagcaacccagcaacccgcatgctgaagaca
gccgccgctcaggttggcacctcggtatcttcgtccaccaccaatacacctactcggccc
atcatcaccgtgcacaagtctggcactgtcactgtagcacagcaggcccaggtgatgact
actgtggtgggaggggtgaccaagaccatcacattggtgaaaagtcccatctcagtacct
ggaggcagtgcattgatttccaatttgggtaaagtgatgtcagttgttcagactaaacct
gttcagacatcagctgtgacaggccaggcatcaagtggccctgtgacccagataatacag
accaaagggcccctgcctgctggcactatcctaaagttggtgacctcagcagatggcaag
cccaccacaatcatcaccagctcccaggcaggcggtacaggcaccaagcccaccattctg
ggcatcagcagtgtctctccaaatacaacaaagcctggcaccacaaccatcatcaagacc
atccccatgtctgctattattacccagtccggtgccacaggtgtcaccagtagccctggg
atcaagtctcccatcaccatcatcaccacaaaagtgatgacttctggcactgggacacct
gccaagatcatcacggctgtacccaagctgaccacaagccacgggcagcagggtgtaaca
caggtggtacttaaaggagccccaggtcaacctggcactattctgcgaacagtccctatg
ggtggagtgcggcttgtcacccctgtcacggtgtctgctgtcaagcctactgtcaccact
ttggtggtgaaaggaactacaggtgtcacaaccttgggcactgtaactggcacagtctca
accagcctagctgggactgggggacacaataccaatgcctccttggcgacacctattacc
accttgggcaccatcgccacactttccagccaggtcatcaacccagctgccatcacagtc
tcagcagcacagactaccttgacagcagcaggagggctgagcacgcccaccatcaccatg
cagcctgtgtcccagcctactcaagtcaccctgattacgacacccagcggcgtggaggcc
cagccagtgcatgacttgcccgtctctatcttggcctcgcctaccatggagcagcccaca
gctactgttgcaattgctgaatcagggcagggagacgcacagccaggcaccgtcactttg
gtgtgctccaatccaccatgcgagacccacgaaacgggcaccaccaacacagccacgaca
actgtagtgggcactttgggtgggccgacccaggtgcagtttgtgtgtgaggggcaagag
ggtggtgggcttcagcccaatgggagagtggtgcgggtatgttcaaatcctccttgtgag
acccacgaaacaggcaccaccaacactgccaccactgtgcggagtgctgggcaaaaggtg
tgctccaacccaccctgcgaaacgcatgagactggaactaccaatacagccaccacctcc
aggattgagaagacaactgcagatccaccatgccaaactttccagactagtgccactagc
actaccatgacagtgaaacccattgtgggcacaggtcagctagtgtgctccaacccaccc
tgtgaaacccatgagacgggaaccaccaacacagccaccactgccacctctaacatgggc
cgagggcaacctgatggtgagcagaaagaaccaaccaaccccccatgccagacaaagcag
actaatacaaccagcaccaccatgtcggcaaaagcagatgtgcccactgagcaaccatgt
gcagtccggatggtgagctttacttcagcttctggtgtgcccagcgtggcctctggcacc
accaccacagtgcaggccagcgaaagactaccagcccccaaaagcctacagtgtgaatcc
catcacacccacaccaccaatactgccactacagctcggtctctgatgggccgagggcag
cctgacggtgagtgggtgggatccgccaaccctccgtgccaaacgcagcagacctgttcc
accagcaccaccatgtctgccaaagcagacttgcctacaaagcagctgtgcacagtgcag
atggcattgcccgattcaggttcaacgctgcccccctcaagcacactttgtgagaccagc
aaaacaggcgccaaggattcaggcccccaggtgtgctccaatccaccttgcgagactcat
gaaacgggcaccactaacacagctactgtatccacatcaaaccagggtacttcacagcca
ctttgctccaatccaccttgcgagactcatgaaacaggcacgaccaacacatctacaaca
gccacttccagcatgggcgtagggcagcaagtgtgctccaacccaccttgcgagactcat
gagactggcaccaccaacacagcaaccaccacaacatcaaacatgggcgcagggcagggc
gaaggtgctgggcaaactccttctgctccaccctgtgaaacacagcagacgagctccacc
agtactactatgacgtccagcaccgggggtgatggcacccacatttccagctcaacctct
ttgccggtggggggctctgaatcaggaaaagcccctgagggagaaagtccaggcactgaa
ggattaccacttcagaacccaaccaccagagtgtgctccaatcctccttgtgagacccac
gagactggaacaacccacacagccaccactgtcacctcctccatgggggccaatcaagac
cagccacctgccaccaatggccaacagggggaacctgagtcaaccgtgactgagagccca
gctgccagtagccccagtactgttacaaccaccgttgcctccacactgcccagggctgtc
accaccgtgacacagtcaacccccccgccaggaccctctgtgccgaacatttcttctttg
gctgatacgcctgcggaggaggccagtccccctgctgagacaccagctgccaccagtaca
gattcccttacaggagcctctgaaccactgcagcctcctgcggagatgcaggcagcagcg
tctgagcctcaggagcagatccacgctgcaccgacagcaggcaccccaccagttgaagct
gctccccagccagagctcccagcgcctgtggtggaggcaccagcagcaccagcagctcct
gcccgggagcctgtcaccatggtggtggtgcctcaggtgacccctgctgctgctcctgct
cctccaccgccacctccagcaccagcaccaccttcagaagtagaacagttggcactgccc
caggagttgatggccgagagccaggcaggcaccaccacactcatggtgacagggttgacg
ccggaggagctggcagtgactgcagctgcagaggcggctgcccaagctgctgctaccgaa
gaggcccaagccctggccatacaagcagttttgcaagctgcccagcaggctgtaatgggt
cctggagaggccatggatacatctgaagcagcggcaacacaagcggagctcagccacttg
gcttcagagagccctgagggccaggccaccgccatccccattgtgctcacccagcaagaa
ctggctgccctcgtgcagcagcagcaccagcttcaagaagctcaggcggcggcagtagcg
gcagccgcggcggcagctcaacaacagccacctcagcacccgctgccttcccacttgccc
acagaagccctggcccctgctgacagcctcaacgaccctgccagtgagagcaacggcctc
aacgagttggctagtgcagttacgagtacagttgggctgttaccccctacgcccacagag
agccttgctccctctaatacttttgtggcaccacagccagtggtggcggcggccagccca
gcaaagctgcaggcggcagctgctctgactgaggttgccaatgggattgaagcagcgcca
gtgaaaccagagcctcccactcagcctccaaaggtggttgtgaagaaggagaaccagtgg
tttgatgtgggtgttgttaaagcaactaacatgatggtgacacactacttcctgcctcct
gatgatgcgcctgccacagaagatgactcgggcaccatacccgattattctcaactcaag
aagcaggaactgcagcctggtactgcttataaattccgtgtggcaggaatcaatgcctgt
ggccggggtccttttagtgaaatttcagcattcaagacgtgtctgcctggcttccctgga
gcaccatgcgccattaaaatcagcaagagtccagatggagcccatttgacttgggagccc
ccttctgtcacctctgggaagatcacggagtactctgtgtacctggccattcagagtgcc
caggcaggcgaaccgaagagtgcagcccccgctcagctggccttcatgcgagtttattgt
gggcccagcccctcatgcctggtgcaatcagccagtctctccaatgcccatatagactac
acaaccaagcctgccatcatcttccgcattgctgcccgcaacgagaagggctacggccct
gccacacaagtccggtggctgcaagaatccagtaaggatggctccatgataaaaccagcc
aacaagcggccgctgtcctctcccgacctgaaaaccgctccaaagaagcccaaagcagat
gggcagtga
DBGET
integrated database retrieval system
