Podarcis raffonei (Aeolian wall lizard): 128405253
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Entry
128405253 CDS
T09310
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128405253 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128405253 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128405253 (USP5)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128405253 (USP5)
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128405253 (USP5)
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128405253 (USP5)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128405253 (USP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_3
UBA_4
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
128405253
NCBI-ProteinID:
XP_053227663
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Position
17:complement(3326428..3355710)
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AA seq
854 aa
AA seq
DB search
MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVGKH
YEKTGQRVYLHLKKTRKLKEEDTNSSSGDPPRKKPTRLAIGVEGGFDIPEEKYEYDEYVK
IVILPEHLDIPRDGLEGLPDMVKDRISSAIEAILTADSASRKQEVQAWDGEVRRVSRHAF
SLQQLQNAVRIPPCGWKCSKCDMRENLWLNMTDGSILCGRRYFDGSGGNNHAVEHYRETG
YPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMN
QRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKI
FQNAPADPTQDFNTQVAKLGHGLLSGEYSKPAASDGEQQLDKGIQDGIAPRMFKSLVGKG
HPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRVD
YIMQLPVPMEAALNKDELLEYEERKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVDD
FWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPDELDISALQG
TGLQPEEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVITQLV
EMGFPTDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPPS
EDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAESI
SESVPVGPKVRDGSGKYQLFAFISHMGTSTMCGHYVCHIKKDSRWVIYNDQKVCASEKPP
KDLGYIYFYQRVSS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagtgaagcgctactctctgtactgccatccatccgggtccccaaggcc
ggagaccgcgtccataaggatgagtgcgccttctccttcgacaccccggagtctgatgga
ggcttgtatatttgcatgaacacattcctgggctttggaaagcaatatgtggggaagcat
tatgagaaaacaggtcagcgagtttatctacatcttaagaagacacgcaagttgaaagaa
gaagataccaactccagctctggagatcctcctaggaagaaaccaacgcgtctagctatt
ggcgtggaaggtgggtttgacatcccggaggagaaatatgaatatgatgaatatgtcaaa
atagtcattttaccagagcacttggatattcctcgagatggactggagggtctgccagat
atggtcaaggacaggatttccagtgcaattgaagcgattctgacagcagactctgcctcg
cggaagcaggaggtgcaggcctgggatggggaagttcggcgtgtgtcaaggcacgccttc
tcactgcagcagctccagaatgctgtgcgtatccctccttgtggctggaagtgcagcaag
tgcgacatgcgcgagaacctgtggctcaacatgaccgatggctccatcttgtgtggacga
cgctactttgacggcagcgggggcaacaaccacgcagtggaacattaccgggaaacgggc
tacccgttggccgtgaagctgggaacaatcactcctgatggagctgatgtctattcatac
gatgaagacgacatggttttggaccccaacctggcagagcacctggctcattttgggatt
gacatgctcaaaatgcagaagactgacaagacgatgacagagctagagattgacatgaac
cagcggattggtgagtgggagctgatccaagagtccggggttcagctcaagccactctat
ggccctggctacacaggcatccgtaacctggggaacagctgctatctcaactcagtagtg
caggtgttgttcagcataccagatttccagcggaagtatgtagacaagctagagaaaata
ttccaaaatgctcctgctgatccgacacaggacttcaacacccaagtggccaagctgggc
catgggctactctctggggaatattcaaagccagctgcttcagatggagagcagcagctg
gacaagggcattcaagatggcatcgcacctcgaatgtttaaatcacttgttggcaaaggt
catccagaattctctactaatcggcaacaagacgctcaggagttcttcctgcacttcatt
aacatggtggagaggaactgccgtagctccgagaaccccaacgaggtcttccgcttcttg
gtggaggagaagctcaagtgtttggccacggagaaagtgaaatacacccagcgcgttgat
tacatcatgcagctgccggtgcccatggaggcagcgctgaacaaagatgagttgctagaa
tatgaagaaagaaagcggcaggcagaggaggagaagcagccgctgcccgaactggtccgt
gccaaggtgcctttcagctcctgcctagaggcctatggggccccagagcaagtagatgac
ttctggagcacagccttgcaggccaagtctgtggcactcaagacaacccggtttgcatct
ttcccagattatctcgtgatccagatcaagaagttcacttttggcctagactgggtgccc
aaaaaacttgatgtctccatcgaaatgccagatgagctggacatctctgcgctccagggg
acgggactgcagcctgaggaggaggagatgcctgacatagcgcctccgctggtgacgcca
gatgagcccaaaggtagcctgggtttctatggcaacgaggacgacgactccttctgctcc
cctcacttctcctctccgacatcccctatgttggatgagtctgtgattactcaactggtg
gagatgggctttccgacggacgcctgccgcaaagctgtgtattacactgggaacagtggg
gctgaggcggcgatgaactgggtcatgtcccacatggatgatccagattttgcaaatcct
ctggttcttcctggatccagtggaccaggttccaccatcgcttgtccagatcctccatca
gaagacagtgtggccaccatcgtctccatgggcttttcccgggatcaggccatgaaagcg
ctcagagctacgaataacagcctcgagcgggctgtggactggatcttcagccatattgac
gacctggacgcagaagctgccatggacatttcggaggggcgttcggcggccgaatccata
tctgaatctgtccctgtagggccaaaagtgcgtgatggatctggaaaataccagcttttt
gccttcatcagccacatgggcacatccactatgtgtggccattacgtctgtcatatcaag
aaggatagcagatgggttatctacaacgaccagaaagtctgcgcctctgaaaagcctccc
aaggatcttggctacatctacttctaccagcgagtctccagctag
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