Podarcis raffonei (Aeolian wall lizard): 128405264
Help
Entry
128405264 CDS
T09310
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128405264 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128405264 (PRPF40B)
Spliceosome [BR:
praf03041
]
Complex A
U1 snRNP components
U1 related factors
128405264 (PRPF40B)
Complex B
128405264 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
SelB-wing_2
DUF6887
Motif
Other DBs
NCBI-GeneID:
128405264
NCBI-ProteinID:
XP_053227696
LinkDB
All DBs
Position
2:complement(6024190..6059191)
Genome browser
AA seq
877 aa
AA seq
DB search
MSAPDSGSGPPPGQPAPFPPAPPPILPPPFMPHPGIPPPFPPMGLPPLGPRPPPMPPMPP
GMMPPPPMIPPMPGPPPLGQMPTMVPPMLPGMIMPGVPGGPVAVSGGAGPATDPSSATAT
QGAPVKPSWTEHRAPDGRVYYYNSETKQSSWEKPDELKSKAELLLSRCPWREYRSETRKP
YYYNTQSKESRWTRPRDLDDIEALIKEEEEEAERQQQPQQPEAPLSGPDSPTPSSAATSD
TEGTGGIEGQETPGTEGGPTAAEEEIASSCDPVRRDEEDRGPGNAWSNKEEAKQAFKELL
KDKGVPASVSWEQAMKLISTDPRFSALPKLSEKKQAFNAYKAQRDKEEKEEARLRAKEAK
EELQRFLEQHSKMSSITRYRKAEQMFGELEVWAVVPERDRKEIYDDVLFFLAKKEKEHAK
QLRKRNIQALKSILDSMSRVSFQTTWSEAQQYLMDNPSFAEDEDLQTCPTLLAQSDAPSC
PAELGPLPPLSDMDKEDALICFEEHIRTLEREEEEERERGRLRERRQQRKNREAFQAFLD
ELHESGRLHSMSTWMELYPSLSTDRRFANMLGQPGSTPLDLFKFYVEDLKARFHDEKKII
KDILKDRSFSVEINTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKAEAREREREKEE
TRKMRRKEAAFKSMLRQAAPPLEPNTAWDEVRERFVNNIAFEQITLESERIRLFREFLQL
LETECQHFHAKAKKHTKKPKKHHRKRSASGSESGSDHPHRTAKRKKRNHSESAGSGPSSS
PDSEHSTRRSKRQKKKSKKKRHKSNSPESEAEHKKDPSRADEWEREKAPPRPEGRGHSPP
RGTRRERSGWDTSESEELSEGELERRRRTLLQQLGDQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccagattcaggcagtggccctccgcctgggcagccggccccatttcctcca
gctccaccaccaattctgcctcctccctttatgcctcatcctgggatcccgcctccgttc
cctccaatggggttgcccccattgggaccgcgcccgccccctatgccacccatgcctccg
ggcatgatgcctcctcccccaatgatcccacccatgcctggaccgccgccccttggacag
atgcccacaatggtaccaccaatgctgcctgggatgatcatgccgggggtgccaggtggg
cctgttgctgtctctggaggggcaggtcctgcaacagacccatccagtgccacggcgacc
caaggagcccctgtgaagccttcatggactgagcatcgggctccggatgggcgagtttat
tactacaattctgaaaccaaacagtcaagctgggaaaagccagacgagctgaagtccaag
gcagaactcctgttgtcacgctgcccctggcgtgagtaccgctcggagaccaggaaacct
tattactacaacactcagagcaaggagtcccgctggacccgtccccgtgaccttgatgac
attgaagcactgatcaaggaagaggaagaagaagcagagaggcaacagcagcctcagcaa
ccagaggcaccactgtcaggccctgacagccccaccccatcctccgcagccacctcagac
acagaaggcaccgggggcattgaaggacaggaaacgccaggcacggagggcgggccgact
gcagctgaggaggagatcgcaagcagctgtgatcccgtccggagagacgaggaagaccgt
ggccctggcaatgcctggagcaacaaggaagaagccaagcaagcttttaaggagctgctc
aaggacaagggcgtcccagcaagtgtgtcgtgggagcaggccatgaagctcattagcacc
gacccgcggttcagcgctttgcccaagctgagcgagaagaagcaggctttcaatgcttac
aaggctcagcgggacaaggaggagaaggaagaggcccggctccgggccaaggaagccaaa
gaggagctgcagcgcttcctggagcagcacagcaagatgagctccatcacccgctacagg
aaagctgagcagatgtttggggagctggaagtgtgggctgtggtgccagagcgtgaccgc
aaggagatctacgatgatgttctcttcttcctggccaaaaaggagaaggaacacgccaag
cagctgcgcaagaggaacatccaggctctgaagagcatcttggacagcatgagccgcgtc
agcttccagaccacctggtccgaagcccagcagtacctcatggacaaccccagctttgcc
gaggatgaagacctgcaaacctgccccaccttgctggcccagagcgatgcaccctcttgc
ccagctgagctcgggcccctcccacctctttcagacatggacaaggaggacgccttgatc
tgctttgaggagcacatccggaccctggaaagagaggaggaggaggaacgtgagcgcggc
cggctgcgggagaggcgccagcagcgcaagaacagggaagccttccaggccttcttggac
gagttgcacgagagcgggcgcctgcactccatgtccacttggatggagctgtacccctcc
ctcagcaccgacagacgctttgccaacatgttgggccagcctggctccaccccactggac
ctgttcaagttctacgtggaagacctgaaggcccgcttccatgatgaaaagaagattatc
aaggacattctgaaggaccggagcttcagcgtagaaataaacacaacctttgaggacttc
gcccacgtcatcagttttgacaagcgtgctgccacgctggatgccggcaacattaagctg
actttcaacagtctgctggaaaaggccgaggcacgggagcgtgaacgggagaaggaagaa
actcgcaagatgcggcgcaaggaggcggcattcaagagcatgttgcgccaggcagctcct
ccactggaacccaacactgcctgggatgaggtccgagagcggtttgtcaacaacatagcc
ttcgagcagatcacactggagtcagagcggatccgcctttttcgtgagttcctgcaacta
ctagagacggagtgccagcatttccacgccaaggccaagaaacacaccaaaaagcccaag
aagcaccatcgcaagcggtctgcttcgggctcagagtcaggctcagaccaccctcaccgc
acagccaagcgcaagaaacgaaaccattcggaatcggctggttcaggaccgtcgtcgtca
cctgattcagagcacagcaccaggcgctccaagaggcagaagaagaaaagcaagaaaaag
aggcacaaatcgaacagccctgaaagcgaagctgagcacaagaaggacccgagccgagcc
gacgagtgggagcgagagaaggcccctccgcgacctgagggaagaggccactcccctccc
cggggcaccaggagggagcggagcggctgggacacctcagagagcgaagagctcagtgaa
ggggaactggaacgtcggcgccggactctgctgcagcaactgggtgaccagtaa
DBGET
integrated database retrieval system
