Podarcis raffonei (Aeolian wall lizard): 128405280
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Entry
128405280 CDS
T09310
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03020
RNA polymerase
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128405280 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
128405280 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128405280 (POLR2B)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128405280 (POLR2B)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128405280 (POLR2B)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128405280 (POLR2B)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128405280 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
128405280
NCBI-ProteinID:
XP_053227719
LinkDB
All DBs
Position
17:8677173..8696912
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggatgaagatatgcaatatgatgaggacgatgatgaaatcactccagat
ttgtggcaggaagcatgctggattgtgatcagttcctattttgatgaaaaaggcctggtc
cgacagcagctagattcttttgatgaattcattcagatgtctgtgcagagaattgttgaa
gatgcaccaccaattgatctgcaagcagaagctcaacacgctacaggagaagtggaagag
ccaccacgctaccttttgaaatttgagcaaatttatctctccaagcctacacattgggaa
agagatggtgccccatcacctatgatgccaaatgaagccaggctgcgaaaccttacgtat
tctgctccgttgtatgtggacataaccaagacagttattaaggaaggagaggaccagttg
cagacgcagcaccagaaaactttcataggcaaaattcctatcatgctccgatccacctac
tgcttattaaatggcttaacagaccgtgatctttgtgagctgaatgaatgtcctcttgac
cctggtggctatttcattattaatggatccgaaaaggttctgattgctcaagagaagatg
gctacaaataccgtatatgtgtttgcaaagaaagattccaaatacgcctacaccggagag
tgcaggtcttgcctggaaaattcttctcggcccacaagtacgatatgggtcagcatgctg
gccagaggtggccagggtgcaaagaagagtgccataggtcaacgtattgtggcaactttg
ccctacatcaagcaggaagtccccattattatcgttttccgtgcgcttggttttgtgtct
gacagagatatactggaacatataatttatgactttgaagatcctgagatgatggaaatg
gttaagccttcattggatgaagccttcgtcatccaggaacagaatgtcgcgctgaacttc
atcggctcaagaggtgcaaagccaggagtcaccaaggagaaaagaatcaagtatgcaaaa
gaagttttgcagaaggagatgcttccgcatgtcggtgtcagtgacttctgtgaaaccaaa
aaagcttactttcttgggtacatggttcataggcttctgctggcagctttagggagaagg
gagctggatgacagagatcactatggcaacaagcggcttgaccttgcaggccccttgctc
gctttcctgttcagaggaatgtttaagaacctgctgaaagaagttagaatatatgcacaa
aaatttattgacagagggaaagattttaacttggagctggctattaaaaccaggattata
tcggatggcttgaaatactcattagctacagggaactggggagaccagaagaaagctcac
caggccagagctggagtatctcaagtattgaaccgtctcacctttgcatctacgctttcc
cacttacgtcgtttgaattcccctattggcagagatggcaaactagcaaagcccagacaa
ctgcacaacaccttatggggaatgatttgtcctgccgaaacaccagagggtcatgctgtg
gggcttgtgaagaacctagccctaatggcatatatctctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaacttagaagaaatctctccagcagct
attgcagacgctacaaagatctttgtgaacggctgttgggttgggatacacaaggacccg
gagcagctcatgaacacactaaggaaactgcggcgtcagatggacatcattgtgtcggag
gtgtccatgatcagggatatcagggagcgggaaattcgcatttacactgatgctggcagg
atttgccgcccacttctaatcgtggaaaagcaaaagctgctgctgaagaagaggcatatc
gaccagctgaaagagcgtgaatataacaactacagctggcaggatctggtggccagtggt
gtagtagaatacattgacaccctagaagaggagactgtcatgctggccatgactccagat
gacttgcaggagaaaggcgttgcctactgttcaacctacacccactgtgagattcaccca
tccatgatcctaggagtctgcgcatcgattatcccatttcctgatcacaaccagtctcct
aggaacacgtaccagtctgctatggggaaacaggctatgggcgtttacattaccaacttc
catgtccgtatggatacccttgcccatgtcctgtattatcctcagaaaccccttgtaaca
acacgctccatggaatacctgcgattcagagagttgccggcaggcatcaactctattgtg
gccatagcttcatatactggatataaccaagaagactctgtcatcatgaaccgttcggca
gttgatagaggcttcttcagatctgtattctatcgttcttacaaagagcaagagtccaag
aaaggatttgaccaagaggaagtgtttgagaaacctactcgtgaaacgtgtcaagggatg
aggcacgccatctatgacaaactggacgacgatggcttgattgcacccggcgtgcgcgtc
tcgggagatgacgtcatcatcggcaagacggtaactttgcccgagaacgaagacgagctg
gagagcaccaaccgccgttacaccaagagagactgcagcactttcttacgcactagcgaa
acgggcattgtggatcaggtcatggttaccttgaaccaggagggatacaagttctgtaaa
attagggtgcgctctgtgagaatcccacaaattggagataagtttgccagcagacatggg
cagaaaggtacctgtggtatccagtacagacaagaggacatgcctttcacctgcgaaggt
atcacccctgatataatcatcaatcctcatgccatcccttcacgtatgaccattggtcac
ttgattgaatgtctgcaagggaaggtatcggcaaataaaggagaaatcggtgacgccaca
cctttcaatgacgcagtcaacgtgcagaagatttctaacttgctgtctgactatggctat
catctaaggggaaatgaggttttgtacaatggcttcactggccgcaaaatcacatcacag
atctttatcggccctacttactaccagcggttaaaacacatggtagatgacaaaatccat
tcccgtgcaagagggccgattcagatccttaataggcagcctatggaaggtcgatcccgt
gacggtggccttcgttttggagaaatggagagagactgtcagattgctcacggcgcagca
cagttcttacgagagagattgtttgaggcatcagacccatatcaggttcacgtgtgcaac
ctgtgcggcttaatggcgatagcaaacaccaggacacacacctacgagtgcagaggttgc
cgtaataagacacagatttctctggttagaatgccgtacgcgtgcaaactccttttccag
gaactgatgtcgatgagtatcgcacctcgaatgatgagtgtgtag
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integrated database retrieval system
