Podarcis raffonei (Aeolian wall lizard): 128405388
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Entry
128405388 CDS
T09310
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128405388 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128405388 (EXOSC8)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128405388 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Swi6_N
Motif
Other DBs
NCBI-GeneID:
128405388
NCBI-ProteinID:
XP_053227941
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All DBs
Position
17:29587905..29602380
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AA seq
280 aa
AA seq
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MMAMAAAAGFRTVEPLEYYRRFLKENCRPDGRDLGEFRTTTVNIGSITTADGSALVKLGN
TTVICGIKAEFAAPPIDSSNKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFIADVIEN
SQMIQKEDLCIVEEKIAWVLYCDIICLDYDGNLLDACMCALLAALKNVHLPAVTVNEETG
LAEVNFKEKTPLTIKKQPVATSFVLLDTVILVDPTAEEEDLATGNLTIVTDEEGKLCSVY
KPGGSVITGTKLQDCISRATVRHKEVKKLMDKVIKSVQPT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgatggcggcggcggctggcttcagaactgtggaacctttggagtattacaga
agattcttaaaagaaaactgccgtcctgatggaagggaccttggtgaattcagaaccaca
actgtcaacataggttcaattacaactgcagatggctctgcccttgtgaagctaggaaac
acaacagtgatatgcggcattaaggcggaatttgcagcaccccctattgattccagtaac
aagggatatattgttcctaatgtggaccttcctccactctgttcatcaaggtttcgaccg
gggcctccaggggaagaggctcaggcagctagtcaattcattgcagatgtgattgaaaat
tcacagatgattcagaaagaagacctgtgcattgtagaggagaagattgcttgggttcta
tactgcgacattatatgcttagactatgatggaaacctcctggatgcctgtatgtgtgct
ttactagcagccttaaaaaatgtccatttacctgccgttactgtaaatgaagaaacgggg
ttagcagaagttaacttcaaagagaagactcctctaactattaaaaagcaaccagtggct
acatcatttgtgctgcttgacacagtaatacttgttgacccaactgcagaagaggaagac
ctggcaactgggaatctaacgattgtaactgatgaagaaggcaaactgtgttctgtttat
aagccaggaggaagtgtaataacaggcacaaagcttcaagactgtatcagccgggcaaca
gtacggcacaaagaagtgaagaaactaatggataaagtgatcaaaagcgtacaaccaaca
taa
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