Podarcis raffonei (Aeolian wall lizard): 128405426
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Entry
128405426 CDS
T09310
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128405426 (APEX2)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128405426 (APEX2)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128405426 (APEX2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
128405426
NCBI-ProteinID:
XP_053228002
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Position
17:complement(36914993..36923401)
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AA seq
532 aa
AA seq
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MRLASWNVNGLRAGLGPAGLRPLLDSLGADVVCLQETKVTRDLLEEPLAIVEGYNSYFSF
SRIRNGYSGVATFCKVSATPEAAEEGLSGLFAKHDGAVGSYGETEGFTTEELQALDSEGR
AVITRHRIRTSEQQETTLTVINVYCPRADPEKPERGDFKLRFYHLLQARAEALLRAGGHV
VILGDINTAHKPIDHCDPGDLESFQEHPGRRWLDSFLWEQDKDSQDGKCFVDTFRFLHPG
QTDAYTCWCNVTGSRQLNYGTRIDYILADRALALSELQDAQLMPDVFGSDHCPVRVALRS
VCLGAPRCPPLCTRFLPEFAGTQQKLSRFLVKVERTSLPEERGQKRGGREPSVAGGSKKR
RVGPPQKGQGDLRSFFKAGNGRPRVTTNSANYQSVMKTRTAEDSGVEHPLDASGRIADEH
GVEEVAGGTQPCAGSLREEPILGMANGEALDCGKGSVPSSSNQSAALWKSLLPGPARPPH
CKAHGEPCVLRTVKKLGSNSGRRFYVCARPLGKPSDPRSRCDFFLWASRGNP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggcgagctggaacgtcaacgggctccgggctgggttgggacccgcggggttg
aggccgctcctggactccctgggggcggacgtcgtctgcctgcaagagaccaaggtcacc
cgggacctgctggaggagccactggcaatagtggagggctataactcttatttcagcttc
agtcgcatccgcaatggctattcaggtgttgcaacattctgcaaagtcagtgccacccca
gaggcagctgaagaaggcctgtctgggctgtttgctaagcacgatggcgcagttggttct
tatggagagacagagggcttcacaactgaggagctacaggcattggacagtgagggccgg
gctgtgatcacacgtcaccgtattcgcacttcagaacagcaggagaccacgctgacagtc
atcaatgtgtactgccctcgtgcagaccctgaaaagccagagcgtggggacttcaagctg
cgtttctatcacctcttgcaagctcgggctgaagcacttctcagagctggaggccatgtg
gtcatcctgggggacatcaacacagcacacaagcctattgaccactgtgacccgggagat
ctggaatcctttcaggagcatcccgggcgccgctggctggacagtttcctgtgggagcaa
gacaaggattcccaggatgggaagtgctttgtcgacacgttccgttttctgcaccctggt
cagactgacgcctacacctgctggtgcaacgtaaccgggtcccggcagctcaactacggc
acccgcattgactatatcctggctgatcgtgcgctagcattgtcagagctgcaggatgcc
cagctcatgccagacgtctttggctccgaccactgccctgtgcgggtggcgcttaggagc
gtctgcctgggggcaccccgctgcccacctctctgcacccgcttcctgcctgagtttgct
ggcacccagcagaagctcagccgcttcctcgtgaaagtggagcggaccagcctgccagag
gagaggggccaaaaacggggcgggagggaaccaagtgttgcagggggttccaagaagaga
cgggtgggtccaccacagaaggggcagggagatttgcgaagcttcttcaaagctggaaac
ggcaggcctagggtcaccaccaacagtgccaactaccagtcggtaatgaaaacaaggaca
gcagaagattctggggtggaacatcctcttgacgcttctggaaggatcgctgatgagcat
ggggtggaggaagttgctggtgggacccagccatgcgctgggagtttgagagaggagccc
attctgggcatggccaatggagaagctctggattgtgggaaaggctcggtcccctctagt
tcaaaccagtccgctgccctgtggaagtctctgctgccaggccctgctcgcccgcctcac
tgcaaggcccatggagagccctgtgtcctgcggacagtgaagaagctgggatcaaactct
gggcggcgcttttacgtctgcgcccggcctctggggaagccgtcagatccccgctcccgc
tgtgacttcttcctgtgggccagtcgggggaatccttga
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