Podarcis raffonei (Aeolian wall lizard): 128405688
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Entry
128405688 CDS
T09310
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128405688 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
praf03009
]
128405688 (REXO1)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-60S particles
RNases
128405688 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
TIL_2
Motif
Other DBs
NCBI-GeneID:
128405688
NCBI-ProteinID:
XP_053228529
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All DBs
Position
18:11267290..11306287
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AA seq
1197 aa
AA seq
DB search
MLRSSGFLRGVDCPFGTACHRPYCHFRHPPGPPHAQQGQARSSRRPSASAAGCGYDPYNP
ELPKPVSQSRNGSVEEMAEAAPGILELELVNKAIEAVKNEVEREQKKYEELLGTAKEYGS
SEPPSLVSKAPGSAAPKSFAALEYNPGGYSAGGSADYNPTPLAVAAPSRSTKYTLDTFDK
AKGKGSSLEYVPTVVTQPKKYSCTVAKSKYTLDNSKPSTDLEYDPLSNYSARLLSKAKEQ
RGAKRKREADPEEGYSPSPKKHCNAGSGPEPDARFSDSEEECEAAPVIPSKPKGGPGSKP
AGGKGSPRADSRQMKETAVQYDMGDIEGGVKDLPEEGEKVAKVPPKRDTSEGKGCPKEKV
KKKAVGGHAADGKRQRGKVADKEKAEAKAQRRNGERSKEKHSKPHADGRSRKQDENPKAA
KAGSSGMCKKVPQGPRAEKVGGVKKDGKLNPPGGLRPKAEASQAERKDKQGKRPASKGPT
ESPGAKCKAKRRALSHADLFGDESGDEGQAGQPHPVAFPDVSSDSDRDDGCCFLPPQDNG
VAKRPKAPKAAPPSSSSSSSSSDELDYSVLERDVDFESDPMEECLRIFNESTDVKTEDKG
RMGKQPSKEEGSEEKPAEDCLTTLFPGQKRRISHVTKPGNAEAPTKPVFRPYRPPTAQEV
CYQRIQLAQKQAAQLARRLPPTRPSPAPPRASVAMHKGEKRRIAHVPNPALPTVSKSALG
GLKKIAPPGSTASSNGAEALSLKARTLAGMASKTTNTNVPKRIAHAPTLQSATLKRPVIP
TEFGAKVPTNVRQRYLNLFIDECLKSCTSQQEAFDKALAEEKVVYDRSTSRNIYLNVAVN
TLKKLRSALPSPAHDARRIGNRKLVSHEAMLGGKLAAKTSFTLNRSAAAQLRAEDLKGAS
LYRRLKEYVLTEEDLKEHGYPLPCPETSGRAIVFNAEEKKTTDGSCRVCCRCGTEYMVTP
SGNCVRKEECVHHWGKLRKQRVPGGWETHYNCCSGAVGSPGCQVAKQHVHDGRKESLEGF
VKTFEKMPSADGNPGIYALDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPDHKVVDYN
TRFSGVTEADLENASITLRDVQAVLLSMFSSDTILIGHSLESDLFALKLIHGTVVDTAVV
FPHRLGLPYKRALRTLMADYLKRIIQDSVEGHDSSEDARACMELMIWKIKEDAKVKR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctcgagcggcttcctgcgaggcgtcgactgccccttcggcaccgcctgccac
aggccctactgccacttccgacacccgccgggcccgccgcacgcccagcagggccaggcc
aggagcagcaggaggccctccgcctcggcggcagggtgcggctatgacccttacaacccg
gagcttcccaagcccgtgtcgcagagccgcaatggctccgtggaggagatggccgaggca
gcgccaggcatcctggagcttgagctggtcaacaaggccatcgaggccgtcaagaacgaa
gtcgagcgcgagcaaaagaagtacgaggagctcttggggacggcgaaggagtacggctcc
tccgagcccccgtcgctggtctccaaggcccctgggtcagcagcacccaagtccttcgcc
gccttggaatataaccccgggggctacagcgcgggcggcagtgccgactacaatcccacc
cccctcgcggtggccgctcctagccgctccaccaagtacaccttggataccttcgacaag
gcgaaaggcaagggcagctcgctggagtacgtgcccacggtggtcacacagcccaagaag
tacagttgcacagtcgccaagagcaaatacaccctcgacaactccaaaccgtccacggac
ttggagtacgaccctctttcgaattactccgcccggctcctgagcaaagccaaggagcag
aggggggccaagaggaaaagggaggccgaccccgaagagggatattcgccttctcccaag
aagcactgcaacgcagggagcggccccgagccggacgccaggttctccgactcggaagag
gagtgcgaagcggctcccgtcatcccttcgaaaccgaaagggggtccgggaagcaagccc
gcaggcgggaaggggtccccgcgggccgattcccggcaaatgaaggagacggcggtgcag
tacgatatgggggacatcgagggcggcgtcaaggacttgccggaggagggcgaaaaggtg
gccaaggtgccccccaaaagggacacgagcgagggcaaggggtgcccgaaggagaaggtg
aaaaagaaggccgtcggcggccacgcggcagatggcaagaggcagcgtggcaaggttgcg
gacaaggagaaggcggaagcgaaggctcagcgcaggaatggagagaggagcaaggagaag
cacagcaagccccacgccgacgggcgttcgaggaagcaggatgagaaccccaaagctgca
aaagcggggagctccggcatgtgcaagaaggtcccccaaggccccagagcagagaaagtg
ggcggcgtgaagaaagacggcaagctgaacccgcccgggggcttgaggcccaaggccgag
gcttcgcaggccgaacgtaaagacaagcaggggaagcgtcccgcctcaaagggtcccacg
gagagccccggagccaagtgcaaggcgaaacggcgggctctgagccacgctgacctcttt
ggggatgagagcggggacgaggggcaagcggggcagcctcaccccgtggccttcccagac
gtgagctcggattcggaccgagacgacggctgctgcttccttccgccccaggacaacggg
gtggcgaagcgccctaaggcacccaaagctgctcctccttcctcctcctcctcgtcctcc
tcttccgacgagctcgactattcggtcctggagagggacgtggacttcgagtccgacccc
atggaggagtgccttcggatttttaacgagtcgaccgacgtcaagacggaagacaaaggc
aggatggggaagcagccgtcgaaagaggaagggtccgaggaaaagccggccgaagactgt
ctaaccacgctttttcctggccagaagcggaggatctcccacgtgacaaagccagggaac
gccgaggccccgaccaagcccgtcttccgcccgtaccggcccccgacggcccaagaggtg
tgctaccagcggatccagctggcccagaagcaggcggcccagctggcccggcggctgccc
cccacgcggccgtctccagcacccccgagagcctctgtggcgatgcacaaaggggagaag
aggaggatcgctcacgttcccaacccagctcttcctacagtgtccaagtccgccctagga
ggcctcaagaaaattgctccgcctgggagcacggcgtcttccaacggggccgaagcccta
tccctgaaagcccgcacgcttgctgggatggcgtccaagacgaccaacacgaacgtcccc
aaaaggatagcccacgctcccacactgcagagtgctactttgaaaagaccagtgatcccc
accgaattcggggcaaaggtccccaccaacgtccggcagagatacctcaacctcttcatt
gacgagtgcctgaagtcgtgcacctcgcagcaggaagcgttcgacaaggccctggcagag
gagaaggtggtctacgaccgcagcaccagccgcaacatctacctgaacgtggcggtgaat
accctgaagaagctgcgcagtgcccttcccagccctgcgcatgatgctcgcaggattggc
aaccggaagctggtgtctcacgaggccatgttgggaggcaaactggcagccaagaccagc
ttcaccttgaaccgctctgcggccgctcagttgcgagcggaggacctgaaaggggcctcc
ctctaccgccggctcaaggagtacgtcttgacggaggaggacctgaaggagcacgggtac
cccctgccgtgccccgagacgtcaggccgcgcaatcgtcttcaacgcggaggagaagaaa
acgaccgacggctcctgcagagtttgctgccgctgcggcaccgagtacatggtgacgccg
tctgggaactgcgtccgcaaggaggaatgcgtccaccactgggggaagttgcgcaagcag
agagtccctggtggttgggaaacccattacaactgctgttcgggagctgtgggttccccc
gggtgccaagtcgcaaaacaacacgttcacgacggcaggaaggagagcttggagggtttc
gtgaagacctttgagaagatgcccagcgcggacgggaacccgggcatctacgccttagac
tgcgaaatgtgttacaccaagcaaggcctggaactgactcgggtcacggtgatcaactca
gagctgaaagttgtctatgacaccttcgtcaagcctgaccacaaagtcgtggactacaac
actcggttttccggcgtgacggaggcggacctggagaacgcctccatcaccttgcgggac
gtccaagccgtcctcctgagcatgttcagctcggacacgatcctgatcgggcacagcctg
gaaagcgacctgtttgcgctcaagctcattcacgggactgtggtggacacggctgtcgtt
ttccctcaccgcctgggcttgccttacaagcgggctctgcggaccttgatggcggactac
ctcaagcgcatcatccaggacagcgtggaaggccacgactcgagcgaggacgcccgggcg
tgcatggaactgatgatctggaagatcaaggaagacgcgaaagtgaagcggtga
DBGET
integrated database retrieval system
