Podarcis raffonei (Aeolian wall lizard): 128405837
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Entry
128405837 CDS
T09310
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128405837 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
128405837 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128405837 (LSM7)
03041 Spliceosome [BR:
praf03041
]
128405837 (LSM7)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128405837 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
128405837 (LSM7)
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128405837 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
128405837
NCBI-ProteinID:
XP_053228808
LinkDB
All DBs
Position
18:539490..543453
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AA seq
109 aa
AA seq
DB search
MPVESKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEY
MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggagagcaagatggcggacaaagagaagaagaagaaagaaagtatattggat
ctgtctaagtacattgataaaaccatccgtgtgaagttccagggtggccgggaagctagc
ggtgtcttgaaaggatttgacccccttctaaacctggtgctggatgggaccattgagtat
atgagagatccagatgaccaatacaagctcacagaggacacccgtcagctgggactggtg
gtctgccgagggacctcggtggtcctcatctgtccccaggatgggatggaagccattccc
aaccccttcattcagcagcaagatggctaa
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