Podarcis raffonei (Aeolian wall lizard): 128405872
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Entry
128405872 CDS
T09310
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
praf04990
]
128405872 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
praf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
128405872 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
AAA_16
EIF3I
Beta-prop_IFT140_1st
AAA_22
NACHT
NPHP3_N
Beta-prop_DCAF4
DAP3
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
128405872
NCBI-ProteinID:
XP_053228848
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All DBs
Position
18:complement(12095538..12111415)
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AA seq
1616 aa
AA seq
DB search
MEAEREALMESAYPEVQAFCQKHGLMFEVIDLRWGVRDVTGAGQEPLFLDEIRRCQELSV
GPSFVALLGSRYGPCPAPATIGEEEFEALAAQLQQEEPQALQMLTRRYLKDENATPPVYA
LQRPLPHGEQQSLVLALRTAAREAERKGLIGQCQRLRYHKSDTHREIEARLLGPEDEGAA
VVFLRETETSLDEEGEEEGEEEDEDARQMLEELKGTVASACPGLLRVHRAPHAAAPGALR
QKPQPKHLKELCDQFVAVANYQAIQALRAREGHPGGGRLLQELSHHAALAREHCRTPCWR
PELVDSLCQRLRDSLPRCHPPLVVHGPPGCGKTVLLCHLRGVACQALGPEAVVVFRLLGA
SQDSCGRDALLASLCQQVCLALGLSPLGTGDPLLRFHHALLSASRQASQPLVLILDATES
LGTAWLPAVCPPGVQLVISAQDEGGSGGAFGGDPFVVAPLSAKEAGKALAESLASAGRTL
QPEQRALFWQSFSNGGQALPLSLAVAEARRWPSFASLSALAVPLTAAEAAHRLCGRLEEA
HGSVLVANALSYLACTRNGLSEAEMKDVLSLDNEVLSEVYRSHPPPGKGVLRLPPLLWSH
LRRDLNPELEEKWSDGFVLMGFLHRSGATPLPPLFFGVAKGSGKRVPLLPRKGKARSLSA
AGHLLGKQNVPGDMLGTSREFSAAVEERYLSRPEDRVRRHLLLADFFRGTWSWGAKKPIV
LPSSAKPVSVDRKVTPQPLWFSSRLPNRRKLSEQPFHLLHGGRMEELRRDVLGNMAWISC
RVASSGVRILATDFALCLTHIFCPELRLVRDCLLLLLDPSVDDAEGRLEPNVVYTEMLAR
LESLASSYPGGLIAGLCQQCKSWLGSRPHPSLVPLDGFLDPPDGPLRKTLPGFPKGTSVL
EASPDQRVLLAGSLDGSIIVWDTEDFSVRHVLLGHSAEVRCLRVFARGTCAISVAQDRTL
RLWSLESGREEAVVPAVPAGDQEWCQLSVDDKHQIVYWVSGSEVEAWHLGTAAPAFRILA
EPPGGWLCAAVFVPRLVVVTVSAGGCVRLWDSLSGQLLSRQQLGGLPEDAAPTCGALLRK
MGRMVSGFSGGSLLMVSSEGNGLLEKLPEKICFVALSEDESLLAAGFGCRVRIFRPDPTG
FHQVLNSDLLHDEEVCAAAIAADNTTVFTSSRSECVWVWRLGQEGWLRDVWGDEGPPATH
LTLCGALLVSASPHAPYLRVWDPRDDPGRKPLLPCMASTKCVGLSGGGKYVCFPRSLESC
ELVLWDVEEDLMTGQEIIFFKIKNTTCAPAGEERETLDTSAAVRCLEVAPQRNLAFVGLA
SGTVLVFPLDSAQDVGCIPPAENRKPVCALALARSEEQVAVACKDLVQVLDVGRGDPVPL
IDRPAFSFYTQIPGADISCVALLGGYRVLYGMTTGQLFLYHCPQGQVFALEAHGSSGVTC
LQTSHREAWALSGAADSLQCLWDVDRCHWEHQMSFRKEDSFSQGVLCACFSTDDRLLFTA
SLDQCVTVWDVSCGALLAVQLVHARVTRIVPTPDGFMAVTKLGYLIRERFLHPPSTSSRY
DPLGGIRATCRVTSRRTSGEEDEDVAGGQLAHRGDHATQARHSHLNNKLSQICRIG
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaaagagaggccctcatggagtcggcgtaccccgaagttcaggccttttgc
cagaaacacggcttgatgttcgaggtcattgatttgagatggggcgtccgtgacgtcaca
ggcgctggccaagagcccctctttctggacgagattcggcgctgccaggagctctcggtg
gggcccagttttgtggctctcctcgggagccgctacggcccctgcccggcccccgcgacc
atcggggaggaggaattcgaggccctggcggcccagctgcaacaggaggagccgcaggcg
ttgcagatgctgacccggcggtacctgaaggacgagaacgccacccctccagtgtacgcc
ctccaacgtcccctgccccacggcgagcagcagagtttggtcctggccctgcgcacagcg
gcccgggaggcggagaggaaggggctgattggccagtgtcagcgactgcgctaccacaaa
tcagatacgcacagggaaattgaggcacgcctcttggggccggaggacgaaggggccgcg
gtggtcttcctccgagaaaccgagacctccctggacgaggagggcgaggaagagggcgag
gaagaggatgaagatgcccgccagatgctggaggagctgaagggcaccgtcgccagcgcc
tgccccggtttgctcagggtccaccgggcaccccatgctgcggcccccggcgccctccgc
cagaagccacagcccaaacacctaaaggagctatgcgaccagtttgtggctgtcgccaac
taccaagcgatccaggccctgcgggcgcgggaagggcaccccggcggtgggcggctgctg
caggaactcagccaccacgccgccctggcccgggaacattgccgcaccccgtgctggcga
ccagagctggtggactccctctgccaacgcctgagggacagcctgccacggtgccaccct
cccctcgtggtccacgggccgcccggctgtggcaagactgtcctgctgtgccacctgcga
ggggtggcttgccaggccctaggacctgaggcggtggtggttttccggctgctgggggca
tcgcaggacagctgcgggcgtgacgccctccttgccagcctctgccagcaggtttgcctg
gcgctggggctgagcccgctgggcaccggtgaccctcttctgcgcttccaccatgcactc
ctctcggcctcacgccaggcctctcagcctctggtcttgatcctcgatgccacggagagc
ctgggcaccgcctggctgccggcggtctgccctcccggagtgcagctggtcatctctgcc
caggacgagggtggcagcggtggtgctttcggcggtgaccccttcgtggtggcccctctc
tccgccaaggaggctggcaaggctctggccgagagcttggcatctgcagggcgtaccctc
cagccagaacagcgggcgcttttctggcaaagtttctccaacggtgggcaggcgctaccg
ctgtccctcgctgtcgctgaggctcgtcggtggccatcgttcgcctcgctttcggccctg
gcggtcccgctcacagccgcagaggccgcgcaccgcctctgtgggcgcctggaggaagcg
cacggctccgtgttggtggcgaacgccctcagctacctcgcttgcacccggaacggcctc
tccgaagcagagatgaaggatgtcctgtccctggacaacgaggtcctctccgaggtgtac
cggtcgcaccctccgccgggcaaaggggtcctccgcctgccgcccttgctgtggtcccac
ctgcgccgggatttgaacccggagctggaggagaagtggtctgacggcttcgtgctgatg
ggcttcctccacaggtcaggggccacccctcttcctcccctctttttcggggttgccaag
gggtccggaaagagggtcccgcttctgccgcgaaagggcaaagcccgcagcttgagtgca
gcaggacacctgcttggcaagcagaacgttccaggtgacatgctgggcacctccagggag
ttttcggccgcggtggaggagcgctacctgtctcggccggaggaccgcgtccggcgccac
ctgcttctggccgatttcttccgggggacgtggagttggggggcgaagaagcccatcgtg
ctgccctcctccgccaagcctgtgagcgttgacaggaaggtgacgccacagccattgtgg
ttctccagccgtcttcccaaccggaggaagctgagtgaacagccgttccacttgctccac
gggggacggatggaggagctgcgccgagacgttctggggaacatggcctggatctcctgc
agggttgcttcctctggcgtgcggatcctggccacggactttgccctgtgcctgactcac
atcttctgcccagagctgcgtttggtacgggattgcctcctcctgctcctggatcccagt
gtggacgatgctgagggccgtttagaaccaaacgtggtctacacagagatgctggcgcgg
ttggagtcgctggcgtcctcgtacccgggcggcctgattgcgggtctttgccagcagtgc
aagagctggcttggatcgcggccccatccatccctagtccctctcgacggcttccttgac
ccaccggacgggcctctgcggaagacgctgccaggattccccaaaggcacctccgttctg
gaagccagccctgaccagagggtgctgttggctggctccttggatggctccatcatcgtg
tgggacacggaagatttctcggtgcgccacgtcctcctcggccactcggccgaagtgagg
tgcctgagggtctttgccaggggtacctgtgccatttcggtcgcccaggatcgaaccctg
cgactgtggagcctggagtctggcagggaggaagccgtggtgcccgctgtccctgcgggg
gatcaggagtggtgccaactcagtgtggacgacaaacaccaaattgtgtactgggtgtct
ggctcagaggtggaggcctggcacctgggcacagcggcccccgctttccggatcctggcc
gagcccccaggcggctggctgtgcgctgccgtcttcgtgccgcggctggtggtggtgacg
gtgtcagcgggaggctgcgtccgcctgtgggacagtctcagcgggcagctcctctccagg
cagcagctgggggggctgccagaggatgcagcccccacctgcggcgctttgctccggaaa
atgggcaggatggtgtccgggttcagcgggggctccctcctgatggtctcctcggaggga
aatggcctcctggagaagctcccagagaagatctgcttcgtggcgctttcggaagatgag
tctcttctcgcggcaggatttgggtgccgcgtgcgaatcttccggcccgacccgacaggc
ttccaccaagtcctgaactccgatttgctgcacgatgaggaagtctgtgcagctgccatc
gctgccgacaacaccaccgtgttcacgagctctcggagcgagtgcgtctgggtgtggcgt
ctgggccaggagggctggctgagggatgtttggggggacgaagggccacccgccactcac
ctgaccctctgcggcgccctgctggtgtccgcctctccccacgcgccttacctccgggtc
tgggaccccagggacgaccccgggcgcaaaccgttactgccttgcatggccagcacgaag
tgcgtggggctctccggcggcggaaaatacgtctgcttcccccggtccctcgagagttgt
gagctggtcctttgggacgtggaggaagaccttatgactgggcaagaaataatatttttt
aaaataaaaaacaccacctgtgcccccgcaggagaggagcgcgagacgctggacacctcg
gccgccgtgcggtgcctggaagtggccccccagaggaacctggcctttgtggggctggcg
tccgggacggtgctggtcttccccttggactctgcgcaggacgttgggtgcatccctcct
gcggagaaccggaagcccgtctgcgccctggccttggcccggagcgaggagcaagtggcc
gtggcttgcaaggacctggtgcaggtcttggacgtgggccggggggatccggtgcccctg
atcgaccggccggccttctccttctacacccagatcccgggcgccgacatctcctgcgtg
gccctgctgggcgggtaccgggtgctctacggcatgaccaccgggcagctgttcctctac
cactgcccccagggccaggtgttcgccctggaagcgcatggaagcagtggcgtcacctgc
ttgcagaccagtcacagggaggcctgggcgctcagcggggcggccgactctctgcagtgc
ctctgggacgtggatcggtgccactgggagcatcagatgtctttccgaaaggaagattcc
ttctcacaaggcgtgctctgcgcctgcttctcgacagatgaccggctgctcttcacggcc
tccctcgatcagtgcgtgacggtgtgggacgtctcgtgtggggccctgttggccgtccag
cttgtgcacgcgagggtgaccaggatcgtgccaacgccggacggcttcatggcggtgaca
aaactcggctacctcatccgggagaggttcctccacccgccgtccaccagctctcgctac
gacccgctgggcggcatcagagccacgtgcagagtgacgtctcggaggaccagcggagag
gaggatgaggatgtcgccggcgggcagctggcacaccggggggaccacgcaacccaggcc
aggcacagccacctcaacaacaagctttcgcagatttgcaggattgggtaa
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