KEGG   Podarcis raffonei (Aeolian wall lizard): 128405889
Entry
128405889         CDS       T09310                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:praf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:praf03036]
    128405889 (KDM4B)
Enzymes [BR:praf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128405889 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128405889 (KDM4B)
Chromosome and associated proteins [BR:praf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128405889 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD Spem1 DUF7659
Other DBs
NCBI-GeneID: 128405889
NCBI-ProteinID: XP_053228880
LinkDB
Position
18:complement(4988419..5187101)
AA seq 1098 aa
MMGSENPSPQNPSCKIMTFRPTLEEFQDFGKYIAYIESQGAHRAGLAKVIPPKEWQPRRT
YDDIDSMVIPAPIQQVVTGQSGLFTQYNIQKKPMLVGDYRHLANSEKYCTPRHQDFDDLE
RKYWKNLTFVSPIYGADISGSLYDADVEQWNIGNLNTLLDMVEHQCGIIIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFL
RHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWID
YGKMATQCTCRKDMVKISMDVFVRVLQPDRYDLWKQGKDITVLDHMKPTALTSPELETWN
QTKNALKAKMLRKANRKRSQSRRHKTQDQKLLGDAMGMETALDEVKVKEEQRRVPSLDEE
DKNKALDGKEGECKPKTRIPKVKGERKKKQQHPHPLPQPPQLPLQQLLPPLLLPQPSLLK
QREGQHQVCSEKGGPEAQPPKSASVEESTPPMPALDALPSEAPGEEEGLKPRRIIPMLFV
VPRPKKTSSEKKHASSQDVLERFVTQEQMAPLDLGVKDESGEGENADVPAEPSKLQTTST
FSKLKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEETLPFSGEDDVGDPEPLKSLLSLL
WKNKAPNFAAERRFNAAAASTEPYCAICTLFYPYNQLEKERATVAPGESSSLQPPLKYEQ
KTKPLIPEMCFTSSGENTEPLPSNSYIGEDGSSPLISCAKCCLQVHASCYGIHPDIVNEG
WTCSRCSANALLADCCLCNLRGGALQRTTDGRWVHVICAIAVPEARFLNVIERHPVDITA
VLEQRWKLKCVYCRRWMKKVSGACIQCSYEHCSTSFHVTCAHAAGVPIEPDDWPYAVSIT
CFKHKAASHMIPFSREVSLAQTVITKNRNGLYYRCKVIGVTTQTFYEVNFEDGSYSDNVY
PENIISRDCLKMGPPAEGEVVQLQLTDGITYQAKFIAAQISQIFQVEFEDGSQLMVTRGD
IYTLEEDLPKRVKSRLSLSTGAPQEDAVPGDDLKAAKRPRVGNTKSPEDPGPSPNYFAIM
ETLLQAPFQPGAQSSTMF
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgatggggtctgaaaacccaagtccacagaatcccagctgtaaaatcatgacgttccgt
ccaacactagaagaattccaggactttggaaaatatattgcttatatcgaatcccaggga
gctcacagagctggacttgctaaggtgattcctcccaaggagtggcagccacgcaggacc
tatgacgatattgacagcatggtcatccccgctcccatccaacaggtggtgactgggcag
tcgggactcttcacccagtataatattcagaagaaaccaatgctggttggagattatcgt
cacttggccaatagtgagaagtactgtaccccccggcaccaagattttgatgacttggaa
cgcaaatactggaagaatctgacttttgtttctcctatttatggagcagatatcagcggt
tccctttatgatgcagatgtggaacagtggaatattgggaatctgaacactctactagat
atggtggaacatcagtgtggaattatcatcgaaggcgtgaacaccccctacctctacttt
gggatgtggaaaaccacatttgcttggcatacagaggacatggatctttacagcatcaac
tacctgcattttggagagcccaaatcctggtatgctatacctccagaacatgggaagcgg
ttggagagactggcaaaaggatttttccctgggagctctcaagggtgcgacgccttcctc
cgccacaagatgaccctcatttcaccatctatcttgaagaaatacggcatcccttttgac
cggatcacccaagaagctggagagttcatgattacttttccttatggctaccatgcagga
tttaatcacgggttcaactgtgcagagtccaccaacttcgccacacttcggtggatcgac
tacggcaagatggccacccaatgcacgtgccggaaagacatggtgaaaatctctatggat
gtttttgtacgggtcctccaacctgaccgatacgacttatggaagcaagggaaagacatc
actgtcttggaccacatgaaacctacggctctaaccagcccagagctagaaacctggaat
cagacgaagaatgccctgaaagcaaagatgctgcgcaaggctaacagaaaacgaagccaa
tcccgaaggcataagacacaggatcaaaagttgcttggggatgccatgggaatggagact
gccttggatgaggtgaaggtgaaggaggagcagaggagagtcccaagtttggatgaagag
gacaaaaacaaagccttggatggcaaagagggtgaatgcaagccgaagacccgaatccca
aaagtaaaaggagaaaggaagaagaagcagcagcacccccaccccttgccccagccacct
cagctcccactgcaacaacttctgcctcccctgttactcccacagccatctttgctgaag
cagcgggaggggcagcatcaggtctgttcggagaaggggggccctgaagcccagcccccc
aagtctgcatcagtggaagaaagcacccccccaatgcctgcccttgatgccctgccctcc
gaagctcctggtgaggaggaaggcttgaagccacgccgcattatcccaatgctctttgtg
gttccacggcccaaaaagacatcttcagaaaagaagcatgcctcgtcccaagacgtgctt
gagaggttcgtcacgcaagagcagatggcccccttggatcttggggtgaaagatgagagc
ggcgagggagaaaacgcagatgtgcctgctgagcctagtaaattgcagacaacttctact
ttctctaaactgaagatggagattaagaaaagtcgccgccacccactaggcaagccaccc
acacgctccccactttctgtggtgaaacaggaagcttcaagtgatgaggaaaccctccca
ttctctggtgaggacgacgttggtgaccctgagcccttgaagtccttgctttccctgctg
tggaaaaacaaagcgcccaactttgctgcggagaggcgattcaatgctgctgcagcatcg
actgagccatactgcgccatctgcaccctcttttatccctataatcagttggaaaaagag
agagccacagtcgcccctggagaaagctcctcgctccagccacctctgaaatacgagcag
aagaccaagcctctgattcctgagatgtgcttcacctcaagtggcgaaaacacagagccc
ctcccttccaactcctacatcggagaggatggaagcagccccttgatttcctgtgccaag
tgctgcctgcaggtccatgccagttgctatgggatacatcctgacatagtgaatgaaggc
tggacctgttcccggtgctcagccaatgcattgctagcggattgctgtctttgtaatctc
aggggaggagcccttcaaaggaccacagatggaaggtgggtccatgtaatctgtgcaatc
gctgtccctgaagcccgcttcctcaatgtcattgagcgccaccctgtagacatcactgcc
gttttggagcaaaggtggaaactgaaatgtgtgtactgccggaggtggatgaagaaagtg
tcaggcgcttgcatccagtgctcttatgagcactgttcgacctctttccatgtcacctgc
gcccacgcagcaggggtgccaatcgagccagatgattggccttacgcggtgtcaatcacc
tgcttcaaacacaaagcggccagccacatgatcccattttcaagggaggtgtcactggcc
cagacggtgattacaaagaaccggaacggtctctactaccggtgcaaagtgattggcgtg
acaacgcaaaccttctacgaagtcaatttcgaggatggatcctacagcgacaacgtttac
ccagagaacattattagcagagactgcctcaagatggggccacccgctgagggggaggtg
gttcagctgcagctgacggatggcatcacttaccaagccaagtttattgctgcccagatc
agccagatctttcaggtagagtttgaggatggctctcagctgatggtcacaagaggcgat
atctacaccctggaagaggatcttcccaagagagtaaaatcacgcttgtcgctcagcact
ggggcgcctcaggaagacgccgtcccgggagacgacttgaaagcagccaagcgccctcgg
gtgggcaacaccaagagccccgaagaccctggccccagccccaactactttgccatcatg
gagaccctgctgcaggcacccttccagccaggagcacagagcagcactatgttctaa

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