Podarcis raffonei (Aeolian wall lizard): 128405913
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Entry
128405913 CDS
T09310
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128405913 (MEX3D)
04121 Ubiquitin system [BR:
praf04121
]
128405913 (MEX3D)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128405913 (MEX3D)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128405913 (MEX3D)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128405913 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
KH_KHD4_2nd
RING_XB3-XBAT31
zf-C3HC4
KH_DEAH11_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
128405913
NCBI-ProteinID:
XP_053228921
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All DBs
Position
18:11711957..11717904
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AA seq
644 aa
AA seq
DB search
MPSALYQLEGGPGTCCPPPGLGSLLLNPQILPPACFDPNSILLPKGDLSEHPSSPPATED
HQRDEDEDDGEEEEDPSAALRFALDQLSILGLAKEEEEEAARGKAEEEGRGGEEEEDAAA
QQQHQHQEKDGDHGPLLEEAEGLDRFAYAGGAGGAAAAALPLLGPEGSSAPPLPEIFGAF
PAHLGAPHAPQPPLLAGQHLGSIGSRKRSVNMTECVSVPSSEHVAEIVGRQGCKIKALRA
KTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSMIRATRNKASGTGGSILGP
LNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENV
DRAREEIEAHITMRTGSFVDVNADNDFHSNGTDVCLDLLSGGPSSLWSKAPNPARRALPG
LRSDASPAETYFGGPVPDGAPSSPFGGGSGGFPFSDALGSDDGDFAFDFLPLELAAPAHI
WSPFEPPADPLQAFSRSSSSSHSGASQRRKSTPRHSPTFPEAAAALEHPLARRIPSDPVS
AVPWLPPQGSLSSFSNSTGYSSSSSLPGSLSAASGSPTDSTGSEGPRKASRECMVCFESE
VIAALVPCGHNLFCMECAMRICGRSDPECPACHTPATQAIHIFS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgccctctaccagctggagggggggcccggcacctgctgcccccctcccggc
ttgggcagcctgctgctgaacccccagatcctgccccccgcttgcttcgaccccaacagc
atcctcctccccaagggagacctctcagagcatccttcctctcctcctgcgacggaggac
caccagagggatgaggatgaagatgatggagaagaagaagaagacccctccgccgctctc
cgcttcgccctggaccagctctccatcttgggcttggctaaggaggaggaggaggaagcg
gctagaggaaaggcggaggaggagggtagaggaggagaagaggaggaggatgcggcggcg
cagcagcaacatcagcaccaggagaaggatggagaccatggaccgcttctggaagaggca
gaggggctggaccgctttgcctatgccggaggagcaggaggagcggcggcggcggctctg
cccctcctgggccccgaaggcagcagcgccccgccactccccgagatcttcggggccttc
ccggcccacttgggggccccccacgccccgcagccccccctgctggccgggcagcacctg
ggcagcatcggaagccgcaagaggagcgtcaacatgaccgagtgcgtctcagtgcccagc
tcagaacatgtggccgaaattgtgggcaggcaagggtgcaagatcaaagccttgcgggca
aaaaccaacacctatatcaagaccccggtgcgaggcgaggagccggtcttcatcgtgacg
gggaggaaagaggacgtcgaaatggccaagcgcgagatcctctcggccgccgagcatttc
tccatgatccgagccacgcggaacaaagccagcggcacggggggctcgatcctcggccct
ctgaacctcccagggcagacgaccatccaggtccgcgtcccgtaccgagtggtgggcctg
gttgtgggccccaaaggcgccaccatcaaacgcatccagcagcagacgcacacgtacatc
gtcacccccagccgagacaaggagcccgtcttcgaggtgaccggcatgcctgagaacgtc
gaccgggcgcgggaggaaatcgaggcacacatcaccatgcgcaccggctccttcgtcgac
gtcaacgccgacaacgacttccactccaacggcaccgacgtctgcctggacctcctgtct
ggcggaccctccagcctctggtccaaagcccccaatccggcccgccgcgccctgcctggc
ctccgcagcgatgcttccccggcggagacctatttcggcggccccgttcccgacggagcg
cccagcagcccgttcggcggcggctctggcggcttccccttcagcgacgctctgggctcg
gacgacggcgactttgccttcgacttcctccccttggagctggcggcgccggcccacatc
tggtctccgtttgagccccccgccgacccactccaggccttcagccgatcttcctcctcc
tcgcacagcggcgcttcgcaacggcgcaagagcacgccacggcactcgcccaccttccca
gaggccgcggcggccctggagcacccgctggcccgccggatcccgagcgatccggtcagt
gccgtcccgtggctgccaccacagggatccctctcgtccttctccaacagcaccggctac
tcgtcgtcatcatcgctgcccgggagcctctcggccgcgtcgggttcccccaccgactcc
accggttccgagggcccccgcaaagcttcccgcgagtgcatggtctgtttcgagagtgag
gtgatcgccgcgttggtgccctgcggccacaacctcttctgcatggagtgtgccatgcgc
atctgcggccgctccgaccccgagtgcccggcctgccatacacctgccacgcaagccatc
cacattttctcatag
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