Podarcis raffonei (Aeolian wall lizard): 128406020
Help
Entry
128406020 CDS
T09310
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128406020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128406020
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128406020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT122_1st
WD40_like
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128406020
NCBI-ProteinID:
XP_053229049
LinkDB
All DBs
Position
W:complement(22316196..22335940)
Genome browser
AA seq
472 aa
AA seq
DB search
MGKDAVKAAIEVGNINITSGEVFYLEEHISERQAEVLAEFERRKRARQINVSTDDSEVKA
CLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHKG
PNTLKTARLWIANYSLPRAMNRLEEARLLKEVPEATRTSQKQELHKSLRSLNNFCSQIGD
NRPISYCNFSPNSKLLATACWSGLCKLWSVPDCNLIHTLRGHNTNVGAIVFHPKATIFLD
KKDVNLASCAADGSVKLWSLESDEPVADIEGHTARVARVAWHPSGRFLGTTCYDHSWRLW
DLEAQEEILHQEGHSKGVYDITFHVDGSLSATGGLDAFGRVWDLRTGRCIMFLEGHLKEI
YGINFSPNGYHIATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGSY
DNTAKVWTHPGSSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggatgcagtcaaagcagctattgaggttggcaacatcaatatcaccagtggt
gaagttttttacttggaagagcacatcagcgagcgccaggcagaggtcctggcagagttt
gagcgccggaagcgtgccaggcaaatcaatgtttccacagatgactctgaggtcaaggcc
tgcttacgagccctcggggagcccatcacactttttggagagggccctgcagaaaggagg
gagaggctacgtaacattctgtctgtggttggcacagacgcattgaagaagaccaaaaaa
gatgatgagaagtccaagaaatcaaaagaggagtatcagcaaacctggtaccacaaagga
ccaaataccttgaagacggccagactgtggatcgccaactactccctccctcgggcaatg
aatcgattggaggaagcccggctgctcaaggaggtccctgaggccacacgaacttcccag
aaacaggagctgcacaaatctctaaggtctttgaataatttctgcagccaaattggagac
aaccgccctatctcctattgcaacttcagccccaactccaagctcctggctacagcttgc
tggagtggcctctgtaaactgtggtcagtgccggattgtaatctcatccacactttgcga
gggcacaacaccaacgttggagccattgtctttcaccccaaggcaaccatcttcctggac
aagaaggacgtcaacctggcttcatgcgcagcagatggctctgtcaaactttggagtctt
gaaagtgatgaaccagtggctgacatcgagggacacacagcaagagtagcccgggtggca
tggcatccctctggcaggtttctgggcaccacctgctatgaccactcttggcgcctgtgg
gacctggaggctcaggaggaaatcttgcaccaggaggggcacagcaaaggagtttacgac
atcaccttccatgttgacggctccctttctgccactggtggccttgatgcatttggccgc
gtgtgggatctgcgcacagggcgttgtatcatgtttttggagggtcatctcaaggagatc
tatgggatcaacttttcccctaacgggtaccacattgccactggaagcggcgacaacacc
tgtaaagtgtgggatctccgccagagaaagtgcatctacaccatccctgcccatcagaac
ctggtgaccggagtgaagttcgaaccaaatcatggtaacttcctgcttactggatcttac
gacaacacagccaaggtctggacgcacccaggctcatccccgctgaaaaccttggcagga
cacgagggcaaagtcatgggcttggacatctccctggacgggcagctgattgccacatgc
tcttatgacaggactttcaagctttggatggcagagtag
DBGET
integrated database retrieval system
