Podarcis raffonei (Aeolian wall lizard): 128406025
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Entry
128406025 CDS
T09310
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03420
Nucleotide excision repair
praf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128406025
09124 Replication and repair
03420 Nucleotide excision repair
128406025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128406025
03400 DNA repair and recombination proteins [BR:
praf03400
]
128406025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128406025
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
128406025
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128406025
TCR (transcription coupled repair) factors
Cul4-CSA complex
128406025
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128406025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
128406025
NCBI-ProteinID:
XP_053229053
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All DBs
Position
W:complement(15595491..15771198)
Genome browser
AA seq
769 aa
AA seq
DB search
MAEESSQQQLKNKSLLISSVAVGHHTNGLTKATSSTVSSFANGKPGSSKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISENLYKQLRQICED
HIKAQIHQLREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSKLPSIWD
MGLELFRAHIISDQKVQNKTIDGILLLTKRERNGEAIDRSLLRSLLSMLSDLQIYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEETDRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIKDLSLLYQLFSKVKNGVQALLQQWIEYIKIFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFVNAMKEAFETFINKRPNKPAELIGTA
KYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVD
AEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGSIELTVNILTM
GYWPTYVTMEVLLPSEMIKLQEIFKTFYLGKHSGRKLQWQSALGHCVLKAEFKEGKKELQ
VSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGDLRRTLQSLACGKARVLTKSPRGKDVED
GDKFICNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTL
SHNLLVSEVYNQLKFPVKPTDLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagagtcttcccagcagcagctcaaaaacaaaagtctcttaatttcctctgta
gctgtgggacatcacacaaatggcctgaccaaagctacctcctctactgtttccagtttt
gccaatggtaaacctgggtcatccaagaagttagtgatcaagaactttaaagataaacct
aaactgcctgaaaattacacagatgaaacctggcaaaaactgaaagaagctgtagaagct
attcaaaacagtacttccattaagtacaacttagaagagctctatcaggctgttgaaaat
ctctgctcatataagatttctgaaaatttgtacaagcaattaagacagatttgtgaagac
catatcaaagcacagatccatcagttaagagaggattcattggacagtgttctttttctc
aagaaaatagacaaatgttggcaagaccactgtagacaaatgataatgattagaagtatc
tttttgttcctggatcgaacatatgttcttcaaaattcaaagctgccatcaatttgggat
atggggctagaattgtttagggcacatataattagcgatcagaaagtccaaaacaagacc
attgatggcattcttctgttgactaagcgagagagaaatggtgaggctattgacaggagc
ctgcttcgcagcctcctcagcatgctttcagatcttcagatttatcaggattcttttgag
cacagattcttagaagaaacgaatcgcttatatgcagcagaaggacagaggcttatgcaa
gagagagaggttccagaatacctccatcatgtcaacaaacgcttggaggaagaaacagac
aggattatcacttacttggatcaaagcactcagaaaccactaattgctactgtagaaaag
cagctgctaggtgaacatttaacagccattctacagaaaggtttaaatcacctcctagat
gaaaaccgaattaaggacttgtctctattatatcagttgttcagtaaggtgaaaaatgga
gtacaagctctcttgcagcagtggattgagtatataaagatatttggaagcaccatagta
ataaatccagaaaaagacaaaaccatggtccaagaactgctggactttaaggataaagtt
gatcatataattgacatttgctttttgaagaatgagaagtttgtcaatgccatgaaagaa
gcctttgaaacgttcatcaacaaaagaccaaataaacctgctgaacttataggtacagct
aagtatgtggattcaaagcttcgtgcaggaaacaaagaggctactgatgaagagcttgaa
aagatgttggataaaattatgattatatttaggttcatctatggaaaggatgtttttgag
gcattttacaaaaaagatctagcaaagcggttattggtaggcaaaagtgcatcagtagat
gctgaaaaatctatgctttccaagctcaaacatgaatgtggagctgctttcacaagcaaa
cttgaaggaatgtttaaagacatggagctttctaaagacatcatgatacagtttaagcag
tatatgcaaaatcagaatgtacctggtagcattgaactcacagtgaatatcttgactatg
ggctattggccaacctacgtgactatggaggtcctcctgccatcagagatgataaaactg
caggagatattcaagacattttatctaggaaagcacagtggcaggaaactacagtggcaa
tcagcattaggacactgcgtactcaaagcagaatttaaagagggcaaaaaagagctacag
gtctcattgttccagactttagtgctgcttatgtttaacgaaggtgaagaattcagttta
gaggagataaaacaagctactggaatagaggatggagaccttcgacgaaccctccagtca
ttagcctgcggcaaggccagagtgctaacaaaaagccccagaggcaaagatgtggaagat
ggcgacaaatttatttgcaatgatgacttcagacataagctattcaggataaaaatcaat
cagatccagatgaaagaaacggtagaagaacaagcaagcactacagagagggtatttcag
gatcggcaataccaaattgatgccgcaattgtgagaatcatgaaaatgcgcaagactttg
agccacaatcttcttgtgtctgaagtatacaaccaactgaaattcccagtaaagcccact
gaccttaagaagagaatagagtcgctaattgacagggactacatggaaagagacaaggag
aatccaaaccagtacaactatattgcataa
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