Podarcis raffonei (Aeolian wall lizard): 128406236
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Entry
128406236 CDS
T09310
Symbol
SPTAN1
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin alpha chain, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04210
Apoptosis
praf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128406236 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128406236 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128406236 (SPTAN1)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128406236 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
128406236 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_7
EF-hand_1
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
128406236
NCBI-ProteinID:
XP_053229389
LinkDB
All DBs
Position
Z:complement(745867..940792)
Genome browser
AA seq
2498 aa
AA seq
DB search
MDLSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDANELEKWI
QEKLQVASDESYKDPTNLQGKLQKHQAFEAEVQANAGAIVKLDETGNQMMNEGHFASETI
RTRMQELHRLWELLLEKTREKGVKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLVQEQHPEEEVIRSKQEEVNASWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALGAEADRLQESHPPNAPQIHVKREELVANWEQIRTRAAERHAHLNDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DETGQALLTAGHYASAEVREKLTVLSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLMQNNHYA
KEDVSSRRDALLNRRNALHERALRRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDGLEKAGQKLTDTQHYASEEVEARQSEVLRLW
KKLLEATELKGVKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGIAIQARQFQEAGHFDAGNIRKKQEALGARYEALRDPMAARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNTMVEEGHFASDDVRAKLSDLHQKWESLKGKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVSSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSGSRENLPDEQGGIGARQEQIDNQTLLTKEAGSVSLRMKMVEELYASLLELG
EKRKSMLEKSCKKFTLFREANELQQWIHEKEAALTNEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVANDLESEGLMAEEVQAVQQQEVYGMLPRDETDSKTASPWKSAKLMLH
TVATFNSIKELNERWRSLQRLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESAQDLREKCTELDQA
WGSLGKRADQRKGKLGDSHDLQRFLGDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARSGTFQAFEQFGQHLLARGHYASPEIEEKLGVLDQQRADLEKAWVQRRMM
LDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQSFAEQLISADHYAKGVVANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELQANADRIRGVIDVGNS
LIERGACAGSEDAVKARLAALADQWQFLVRKSAEKSHRLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMTSSAFDTSQV
KEKRETVNGRFQRITSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAHFVDHWQEL
KRLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFAVHKERVNDVCANGQELIQKNNHHEENITAKMAGLRAKVADLERAASQRKAKLDEN
SAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGISN
IAALKDQLLAARHVQSKAIEARHASLTKRWNQLLAGSAARKKKLLEAQEHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRASLSSAQADFNQLAELER
QIRSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGIAYRRVIRVFQYQVGEDLSGRSCMVEESGTLESQLEATKRKHQE
IRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQA
RNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESI
LDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLT
REQADYCLSHMKPYLDSKGRELPSAFDYVEFTRSLFVN
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggatctctctggggtgaaggttctggagacggcggaggacatccaggagcggcgccag
caggttctggaccgctaccaccgcttcaaggagttgtccaccctgcgccgccagaagctg
gaagattcctaccgctttcagttcttccagcgcgacgccaacgagttggagaagtggatc
caggagaagctccaggtggcctcggacgagagctacaaggatcccaccaacctgcagggc
aagctccagaaacaccaagcctttgaggccgaagtccaggccaacgccggcgccattgtc
aaactggatgagactgggaaccagatgatgaacgaggggcatttcgccagcgaaaccatc
cggacccggatgcaggaactccaccgcctgtgggaacttctcctggaaaagacccgggaa
aagggggtcaaactcctccaggcccagaaactggtccagtacttgcgggaatgcgaggat
gtcatggactggatcaatgacaaggaagccattgtcacctcggaggaactgggccaggat
ttggagcatgtggaagttctgcagaagaaatttgaggagttccagacggatttggcggct
cacgaggaaagagtgaacgaagtgaaccagtttgccgggaagctggtccaggagcagcac
ccggaagaggaagtgatccgctccaaacaggaagaagtcaacgcttcctggcagcgactg
aagggactggctctccagaggcaggggaaactttttggggcggccgaagtccagcgcttc
aacagagacgtcgacgaaaccatcagctggatcaaggaaaaggagcagctcatggcgtct
gacgatttcggacgggatctggccagtgtccaggctctcctgcgcaaacatgaggggctg
gagagggatctcgccgccctggaggacaaggtcaaggctctgggcgccgaagccgaccgc
cttcaggagtcccaccctcccaacgccccccagatccacgtcaagcgggaggagctggtg
gccaactgggagcagattcgcacccgggccgccgagaggcacgcccacctgaacgactcc
taccgcctgcagcgattcctggccgatttccgcgatctcaccagttgggtaaccgaaatg
aaggctttgatcaacgctgacgaacttgctaacgatgtcgccggagccgaagcccttctt
gaccgtcatcaggaacacaagggagaaattgatgctcacgaagatagtttcaagtcggcc
gacgaaacggggcaagctctccttacggctggacattatgcttctgcggaagtgagagag
aagctgaccgtcctatcggaggagcgagccgccctcttggaattgtgggaacttcggcgc
cagcaatacgaacaatgtatggatctccagcttttctaccgggacaccgagcaagttgac
aactggatgagcaaacaggaggccttcctgctgaacgaagatctgggcgattctctcgac
agcgtggaagcgctgctgaaaaagcacgaagattttgagaaatccctcagcgcccaggaa
gaaaaaatcacggccctggacgaatttgccaccaagttgatgcagaacaatcactatgcc
aaagaagacgtttcgagccggagagacgcgctcttgaaccgccgcaacgccctccatgag
agagcgctccgccgccgggcgcaactcgccgactccttccatctccagcaattcttccgc
gactcggacgaactcaagagttgggtcaacgagaagatgaagaccgccaccgacgaggcc
tacaaggatccgtccaacctgcagggcaaagtccagaagcaccaggcctttgaggcggag
ctctcggccaatcagagccggatcgacggcctggagaaggcggggcaaaagctgacggac
acccagcactacgcctccgaggaggtggaggcccggcagagcgaggtcctccgcctgtgg
aagaagcttctggaagccaccgagctgaaaggggtcaagctgcgcgaagccaaccagcag
caacaattcaaccgcaacgtggaggacattgagttgtggctctacgaggtcgaaggtcac
ctggcctcggacgactacggaaaggacctcaccaacgtccagaacctccagaagaaacac
gccctcctggaggccgacgtggccgcccaccaggaccggattgacggcatcgccatccag
gcccgccagttccaggaggccggccattttgacgccggaaacatccggaagaagcaggag
gccttgggggcccgttacgaggccctgcgcgaccccatggcggcccggaagcagaagctg
gccgactcgctccgcctccagcagctcttccgggacgtagaagacgaggagacctggatc
cgggagaaggagcccatcgccgcctctaccaaccgaggcaaggacctcattggggtccag
aacctcttgaagaagcaccaggccttacaggccgaaattgccggacacgaaccccgaatc
aaggccgtcactcagaaggggaacaccatggtggaagaaggccacttcgcctccgacgac
gtccgagccaaactctccgacttgcaccagaagtgggaatctcttaaagggaaagcgtcc
cagcggcgccaggatctagaagattccctgcaggcccagcaatacttcgccgacgctaac
gaggccgaatcctggatgagggaaaaggagcccatcgttagcagcaccgattacgggaaa
gacgaggattcggccgaggcgctcctcaaaaagcatgaagcgctgatgtcggatctgagc
gcctacggcagcagcattcaagcgctgcgggagcaagcccaggcctgccggcaacaagtt
gctcccaccgacgacgagaccggcaaggaactggtcctcgccctttacgactaccaggag
aaaagtccccgcgaggtgaccatgaagaagggcgatatcctgaccttactcaacagcacc
aacaaggattggtggaaagtggaagtcaacgaccggcaaggcttcgtccctgccgcctac
gtcaagaagctggatccggcccagtcgggatcgcgggagaaccttccagacgagcagggc
gggatcggggcgcggcaggagcaaatcgacaatcagactttgctaaccaaagaagccggt
agcgtctccctgcgcatgaaaatggtggaggaactgtacgcctccctcctggagctgggc
gagaagcggaaatccatgctggaaaaaagctgcaagaaattcaccctcttccgggaggcc
aacgaattgcagcagtggatccacgagaaggaggcggccctgaccaacgaggaggtcggg
gcggatctggagcaggtggaggtgctgcagaagaagtttgacgacttccagaaggacctg
aaggccaacgagtcgcggctgaaggacatcaacaaggtggccaacgacttggagtccgaa
gggctgatggccgaggaggtccaggctgttcagcagcaggaagtctatgggatgttgcca
cgggatgaaaccgattcgaaaacagcgtctccttggaagtccgccaaacttatgctccac
acagtggcgaccttcaactccatcaaggaactgaacgagcgctggcgatccctccagcga
ttggccgaagagcggagccagctattgggcagcgctcacgaggtccagcgcttccacagg
gacgccgacgaaacgaaagaatggatcgaggagaagaaccaggccctgaacaccgacaac
tacggccacgacttggccagcgtccaggccctgcagaggaagcacgaggggttcgagagg
gacctggccgccctgggggacaaggtcaactccctgggggagacggccgagcggctgatc
cagtcccacccggagtcggcgcaggacctgcgggagaaatgcaccgagttggaccaggcc
tggggcagcctggggaagcgggccgaccagaggaaggggaagctgggagactcccacgac
ctccagcgcttcctgggagacttccgggatctgatgtcttggatcaacgggatccgcgga
ctcgtctcctccgacgaattagcaaaggacgtgaccggggcggaggctttgctggagaga
caccaagagcaccgcaccgaaatcgacgcccgttccggaaccttccaggcctttgaacaa
tttggccagcacctattggcccgcggccattacgccagcccggaaatcgaggagaagtta
ggggtcctcgaccagcagagggccgacctggagaaagcctgggtccagcgccggatgatg
ctggaccagtgcctggagctgcagctcttccaccgggactgtgagcaggcggagaactgg
atggcggcccgggaggccttcctcaacacggaggacaaaggcgattcgctggacagcgtg
gaagcgctgatcaaaaaacacgaggatttcgacaaggcgatcaacgtccaggaggaaaaa
attgcggctctgcaatccttcgccgaacagctgatttcggccgatcactacgccaaagga
gtcgtcgccaatcgccgtaacgaagttttggacaggtggcgccgcctgaaagcccagatg
attgagaagcgctccaagctgggcgaatcccagactctccagcagttcagccgcgacgtc
gacgagatcgaggcctggatcagcgagaagctgcagacggccagcgacgagtcctacaag
gatcccaccaacatccagctttccaaactcctgagcaagcaccagaaacaccaggccttt
gaggcagagctacaagccaacgccgaccggatccggggcgtcatcgacgtcggcaactcc
ctcatcgagcgcggggcctgcgccgggagcgaggatgccgtcaaggcccgattggccgcc
ctggccgaccaatggcagttcctcgttcggaaatcggccgagaagagtcaccgtctgaag
gaagccaataagcaacagaatttcaacaccgggatcaaggactttgacttctggctttca
gaggtggaagcgctgctcgcctctgaggattatgggaaagatttggcgtccgttaataac
cttcttaagaaacaccagctgctggaagccgatatttcggcccacgaggatcgcctgaag
gatctgaatggccaagccgacagcctgatgaccagcagcgcctttgacacctcccaggtc
aaggagaagcgggagacggtcaacgggagattccagcggatcacttccatggcggccgcc
cggcgggccaagctgaacgaatcccaccggctccaccagttcttccgggatatggacgac
gaggaatcctggatcaaagagaagaagctcctcgtcagttcggaggattacggccgggat
ctgaccggcgtccaaaacctgcggaagaaacacaagcggctggaggccgaattggccgcc
cacgaaccggccatccagggcgttctggacaccgggaagaaactctcggacgacaacacc
attggcaaagaggagatccagcaaagactggctcactttgtggatcactggcaggaactc
aagaggctggcggccgcccggggccagcgtctggaggaatcccttgaataccagcaattt
gtggccaacgtggaggaagaggaagcctggatcaacgagaagatgaccctggtggccagc
gaggattacggagacaccctggcggccatccagggcctgctgaagaaacacgaagccttt
gagaccgactttgccgtccacaaggagcgggtcaacgacgtctgcgccaacgggcaggaa
ctgatccagaagaacaaccaccacgaggagaacatcaccgccaagatggccggcctgcgg
gccaaagtggccgacctggagagggcggcgtcccagcgcaaggccaaactggacgaaaac
tccgccttcctccagttcaactggaaggccgacgtggtggagtcctggatcggggagaaa
gagaacagcctcaagacggacgattacggccgggatttgtcttctgtccagactctgctg
accaaacaggaaacctttgacgccggcctgcaggccttccagcaggaagggatctccaac
atcgccgccctgaaggaccagctattggccgcccgccacgtccaatcgaaagccatcgag
gccagacacgcctccctgacgaagcgctggaaccaattgctggccggatcggccgcccgg
aagaagaagcttctggaagcccaggagcacttccggaaggtggaagatctcttcctcacc
tttgccaagaaggcctccgccttcaacagctggttcgagaacgccgaggaggatctgacg
gatcccgtgcgctgcaactcgctggaggagatccgggcgctgagggaggcgcacgacgcc
ttccgggcttccctaagctccgcccaggccgacttcaaccaattggccgagctggagcgc
cagatccggagcttccgggtcgcctccaacccctacacctggttcaccatggaggcgctg
gaggagacctggcggaacctgcagaagatcatcaaggagcgggagctggaactgcagaag
gagcagcggcgccaggaggagaacgacaagctgcgccaggagtttgcccagcacgccaac
gccttccaccagtggatccaggaaaccaggacctacctactcgacggcattgcgtaccgg
cgagtaattcgcgtctttcagtaccaagtcggggaagatctttccggaaggtcttgcatg
gttgaggaatccggaactctggagtcgcagctggaagccaccaagcgcaagcaccaggag
atccgcgccatgcgcagccagctgaagaagatcgaggatctgggagccgccatggaggag
gccctgatcctggacaacaagtacaccgaacacagcaccgtcggcttggcccagcagtgg
gatcaactggatcaactggggatgcgcatgcagcacaacctggagcagcagatccaggcc
aggaacacgacaggggtcaccgaagaagcgctgaaggagttcagcatgatgttcaagcac
ttcgacaaggacaaatccggccgcctgaatcaccaggagtttaaatcctgccttcgatcc
ctcggctacgacttgccgatggtggaggaaggagagccggatcctgagtttgaatccatt
ctggacacggtggatcccaacagggatggccacgtctccctgcaggaatacatggccttc
atgatcagccgggagacggagaacgtcaagtcgagtgaggaaattgagagcgcgttccgg
gcgctgagctccgaggggaaaccttatgtgaccaaggaggagttgtaccagaacctgacc
cgcgaacaggccgactactgcctctcccacatgaagccgtacctcgactccaagggccga
gagctgccctccgccttcgactacgtcgagttcacccgctccctcttcgtcaactga
DBGET
integrated database retrieval system
