Podarcis raffonei (Aeolian wall lizard): 128406259
Help
Entry
128406259 CDS
T09310
Symbol
TSC1
Name
(RefSeq) hamartin isoform X1
KO
K07206
tuberous sclerosis 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04140
Autophagy - animal
praf04150
mTOR signaling pathway
praf04218
Cellular senescence
praf04910
Insulin signaling pathway
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128406259 (TSC1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128406259 (TSC1)
09143 Cell growth and death
04218 Cellular senescence
128406259 (TSC1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128406259 (TSC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128406259 (TSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
128406259
NCBI-ProteinID:
XP_053229456
LinkDB
All DBs
Position
Z:15231695..15263346
Genome browser
AA seq
1158 aa
AA seq
DB search
MAQHGNISHLLAVLDSPHLPVLEGVKTELREILNSDRGPVHVNTLVDSYLETSSEQVLHA
LCTLQEPHDKHLLDKINECMNRSSTRLSALSLLGHVIRCQPSWKHKLSQASVLVTLLKCL
KSDADVVVLITGVLVLITMLPMIPHSGKQYLHDYFGIFGRLASWNLKNPGHTAEIYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENLETFEEIVKPMMAHVRIHPELVTGSKDH
ELDPRRWKRLETHDVLIECARISLDPAEASCEDDYYSPSKQMSSYVQHHSSDFVSNSSVA
LQRNFGTPTSRLSRMSGQLPQISKFQSSFLATEQVTFWSPAVACGMTTPPHSPGIVLETP
YTTAQTLNRTFNIPVEKGARPETAISPPPSCSSEEVAHVSVSTAPPKKEGRTNPARSSLS
RQPNITQSSQAVDSHSSKSLVTLSDLPGILGDLEASSQDSGEKDREEDAISREISEITTA
DAEPVVPRGGFDSPFYRLNEGLPSSKKSQLAASSSQGHNLDSKPLALSPLAASTPGVAQS
GLKRSLDMPKQTFTPIDLPGRYSENHPSGHQQNQVSLESNIVAPSPCKIPARKWMGFGDE
QPPDYEHLFEVALPKTAYHFVSKKTEELLRNVNAGHDKVNSSSPSPLEMLDQLIQHGADA
HSKRLDQLPLLSKSADWTHFGGAPPPDDFSVLRIQLLLLHNELLYERFKRQQHALRNRRL
LRKVIKVTALEEHNAAMKDQLRLQEKDIQVLKLSLKMEQAKFCKFQEEHDMLMARLHSQI
RQLQQEREEYYNHSQELKIRLEDCHKIIAGLRLELNTASSKMCHTELLLSQVSQKLSNCE
SAQQQMEMLNRQLLVFGEMKELCLKQLQHKQAGTTKEVECLQMAFQKELEKAHYCIQQQS
QELEASQKRIGELEYQLAKRDHLLLEQKKYLEDVKIQASFQLQAAEGWYKMQKNITQLFE
VEILSLHGQVQNERLLKSREENKVEQAESNESPHNRLPGANESSADPTMGHSEEPLECSS
ETELPSTRGSSSEVSTPEKPSQRTGQLNNRRESSALLEPSSGSVPPTVGSFPSSESFLGM
KAQELFHNKSKGHCNEDGVATGNVCEPLKTCNDPSLEVTEAAQAPSPSPEELPPSPRTQD
ANVGQLHIMDYNESHGHS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcatggaaatatcagccatcttctggccgtactggattccccacatctgcct
gtcctggaaggtgtaaagactgagcttagagaaatcctaaactcagaccgcgggccagtg
catgtaaataccttggtggattcctacttggaaacaagttcagagcaagtcttgcacgcc
ctgtgcactcttcaagagccgcacgacaagcaccttctggacaaaatcaatgaatgtatg
aacaggtcaagtacccgtctctccgctctctcactccttgggcatgtgataagatgtcag
ccatcttggaaacataagctttctcaggcgtctgtcctggttacgttgcttaagtgtctt
aagagtgacgcggatgtagtggtcctcatcacaggtgtgctagtgttaataacgatgctg
ccaatgatcccccactctgggaagcagtacctgcatgactactttggcatctttggtcgc
cttgcttcctggaacttgaagaatccaggacacacggctgagatctacctggtccacctc
catgccagtgtatatgctctctttcaccgcctttatggaatgtacccttgcaattttgtc
tcctttctgcgctcccactacagtatgaaagaaaacttggagacctttgaagagatagtc
aagccaatgatggcacatgtgcgcatccacccggagctagtgactggatccaaggatcac
gaactcgaccctcggaggtggaagaggctagaaacccatgatgttttgatagaatgtgcc
cgtatctccctggacccagccgaagcttcctgtgaagatgactactattcaccttccaag
cagatgagctcttacgttcagcatcactcctctgattttgtttccaattcttctgttgct
ttgcagagaaactttggaacaccaacttctcggctgtcgcgcatgtcagggcagctacct
cagatctcgaagtttcagtcctcgtttctggcaactgagcaggtgaccttctggagccct
gccgttgcttgtggcatgaccactcccccccactcccctggaattgttttggagacacct
tataccacagcccagactctcaacaggacctttaacataccagtcgagaaaggtgcccgc
ccagaaactgccatctccccacctccctcatgcagttcagaagaagttgctcatgtttca
gtttccactgcacctcccaaaaaggagggcagaaccaatcccgcaaggtcttcattgtcc
cgacagccaaacatcacccaaagttctcaagctgttgattctcacagcagtaaaagtttg
gtaactttaagtgaccttcctggcatcttgggtgacctggaggcctcttctcaagacagc
ggtgagaaggaccgagaggaagatgccatatcaagagagatctcagagatcaccacagca
gatgcggaacctgtggtgcctcggggaggttttgactcccctttctaccgcctgaatgag
ggtctccccagctcgaagaaatcccagctggctgcctcaagttcacaggggcataacctg
gactccaagcccctggcgttgtcaccccttgcagcatcgacaccaggtgtggcccaatct
gggctcaaaaggtcactggatatgcctaagcaaaccttcacgcctattgacctacccggc
cgatactccgagaatcatccttctggtcaccagcaaaaccaggtgtctctggagtcaaac
attgttgcccctagcccttgcaagattcctgcacgcaagtggatggggtttggggatgag
cagccccctgattatgagcacctcttcgaagtggctttgccaaagaccgcctaccatttt
gtaagcaagaagactgaagagcttctcaggaatgtcaacgcaggtcatgacaaagtgaac
tcttcctccccatcccccttggaaatgctggatcagctcatacagcatggagcagatgcc
cacagcaaacggcttgaccaattacctttgttaagcaaatcagctgactggactcacttt
ggaggtgctcctccaccagatgatttcagtgttctcagaatccagctcctcctgctgcac
aatgaactgctgtatgagcgcttcaagaggcaacagcacgcgctgcgaaaccggcggctc
ctgcgcaaagtgataaaggtgacggctctggaggaacacaacgctgccatgaaagaccaa
ctgaggctccaggagaaggacatccaagtcctgaagctcagcctgaagatggagcaggcc
aagttctgcaagttccaggaggaacacgacatgctcatggctcggctccacagccagatc
cgccagttgcagcaggaacgggaagagtattacaatcacagccaggaactgaagatcaga
ctggaagactgccacaaaatcatcgcaggcctgcggctggagttgaacacagccagcagc
aagatgtgtcacacggaattgttgctgagccaggtttctcagaagctttctaactgtgag
tcggcccaacagcagatggagatgttgaacaggcaactcctagtctttggggagatgaaa
gagttgtgtttgaaacagcttcagcacaagcaggctggcacaactaaggaagtggaatgc
ctgcagatggcctttcagaaagaactggagaaagcacattattgcattcagcagcagagc
caggagctggaagcttctcagaagcgaataggcgaactggaatatcagctagcaaagagg
gaccacctcttgttggagcagaagaaatatttggaagatgttaaaatccaagccagtttc
caactccaagcagctgagggctggtacaaaatgcagaaaaatattacgcagctgtttgag
gtggagatattgagtctgcatggccaagtgcagaatgaacggctgttgaagagccgtgaa
gaaaacaaggtggaacaagctgaatccaatgaaagcccccacaacaggctgcctggagca
aatgaaagcagtgctgaccctactatgggacacagtgaggaaccgctggaatgtagcagt
gagactgaacttcccagcacccggggcagcagcagcgaggtgtccacccctgagaagccc
agccagcgcactgggcagctcaacaaccgcagggagtcgtctgcattgctggagccctcc
tctggcagcgtccctcccacagtgggctccttcccaagctctgagagtttcctagggatg
aaggcccaagagctgttccacaacaagagcaagggtcactgcaatgaggatggggtggcc
actggcaacgtttgtgaacctttgaagacctgcaacgatcccagcctggaggtcacggag
gcagcccaggcaccctcccctagccccgaggaactgcctccctcccccagaacccaggac
gccaatgttggacagcttcatatcatggattacaatgaatctcatggccatagctag
DBGET
integrated database retrieval system