Podarcis raffonei (Aeolian wall lizard): 128406366 Help Entry 128406366         CDS       T09310                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism praf  Podarcis raffonei (Aeolian wall lizard) Brite KEGG Orthology (KO) [BR:praf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:praf03021]     128406366 (SETX) Enzymes [BR:praf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      128406366 (SETX)     5.6.2.5  RNA 5'-3' helicase      128406366 (SETX) Transcription machinery [BR:praf03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      128406366 (SETX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  128406366 NCBI-ProteinID:  XP_053229668 LinkDB All DBs Position Z:15665112..15718448 Genome browser AA seq 2346 aa AA seqDB search METCCWCTPIDSVVTTLKNYAYSLLSPERFAAANEDLCFCLECVDEYHKVKDDWSSLHEI LWNLETTRLIAHFEKSMPKEKDDSNSLDCVEGERVQCLDSDIEKKLRVPLLEILKYPYLL LHKQLSMLFVDAICKMEAINYPCQVLGKHPGVYLLMVHPNETIRRWAIMTAKSLGKVDRD DYYDIQEVLNCLLRVIELNLFENAYVYNPTTVEKGNLILLPDHLYDITSYKNYWLGICMV LLVLDEQAMDSLLLGPNKQNDFMQCIINTLKKDSDDESNSPFWPALHCFMVILDKLGSKV WGQHIDPSEAFQTINNSVSYNKEIENIRQRCKRTRSVPLSDCEDEMVTCSQLVYDYRLEK PQKVTRQKSAACPNYFPDLYEDMKTLIDAFQADFGQDIQLHSSTFLWLIPFIHSLMGLRE LGIGYSVQVVSHLCLKTDVSENSAESYDKVSQFFIWVLVIVIQLHLKKKCLSSLWVSAEK WVRTVVAWAKLPRAVFMAGIERRAARSCLISTATSPSLETESVQSFCMKLIRNILKEGLH DVKTPVCKQFFLELNLLLRNRMNLELSPKQTQELQSTLKHIIRTMWMKSGPSSPMVESFP IGVNERQEDMHPVNMCNEHPPHLSAARKDEVCQEGEVQEGSMLANRYMYVQKTMSCHQIL GIDIKVENIWSGVETPRASSPLMTKNDDSSDALEKSVDQNDLTSQRKRLRPLSPIFKAKL RQLLNKCRSSTMLKSKTKKEQSVRDQRKSQEGPKSDIVAGSAGNTSDSLLCKSGAGSSKS FLSLSACMKNKCKDGLVNFETGHSDSEEGSSDDMKEKMPLDIVVRNQQNEFEAAVAVTST STATDPQINIVVNKGTKETPVDSRQESSKKVMGSVQSQSSSEDYPSKAAKGPIHTIIISD SSEEDENQGNTSTESRQDTTCVRHEKQSSAQGQEPMNSSPTNAEHESQLFEFESEAEIYS EWQDSQTNEETTEEENLLVETDNGHRATDLEINYWGYESNPHWFNATEEAKEDPVQNSET KTKPHTPAQKVNISSRNAMCCSTSTGMDAGCSRHIDPSAPTAPSESASAVKESTIQPKKA PPQAEPARSTPTVVPPAKVHHFPPPTSLTENLGLSKKVRRAAELSQRTQDSLAELRRHGE IAGRVDVAQKRTSQLINASHLTTKNRKMLSCQELQFYRQTRPKEREKGQHTQRGNPSSSI LEATASKTNPLTSTDSSSSSCDEDVALKEGEPQLNENIEDDNLFLTQSDPVDMELCSQIE SGSNPTHMEVSVSASPLQDANEICKEAGSKGAAEAEAHGASCSAGSPQDNASAKTFAPPR LSTMKIFSVSSRNANLTKELESIPKPPAVPKSKSYSFMPPTSKGNGLQSQIPMPNSILQP QNSNNVPQLLNVQNNSNVYTGGVLPASRPVSWHEMNPRFTQANSVNAQQRSPAIFSREIL KWNYDMFAQFSQFGPPAYLLQSVMTSVPATFNNYNDYFNTFFPLMMLNTFETVAQDWIEN QKWKDKRNFHLTLLNFSLDTNEADFTANLSESNLGRQYPKQDDFVVLTVYEKQAFHSNPH EAESRPVCHVGCVTRFYFKYKEQDVVNLSVKTQGNLSRIEKKVMCLTVCSLSTMQRMFKA LLLLNRSPLAKAIISTEYSDFSLMGSKVDSENSSSYMREFNEDQRTAIETAYALVTQSPS LPKICLIHGPPGSGKSKTILGLLYCLFIERPGKENSVQSKIKNRVLLCAPSNAAVDDLMK KIILMFKGKCQDSSSPLGNCGDINLVRLGQESSISRDVWKFSLDAQVDHEISKAALGRHQ DICKRKEDLDRQLDIICRQRAIAKTQSAGQLQLLDKEICRLGEERKRLTVQLKKDCGRSQ GDLKANIILKSHIICCTLSTSGSSMLASAFRRQGCDPLSCVIVDEAAQSCEMESLIPLTH GCKKLVLVGDPKQLPPTVKSMTAEEYGYGQSLMERLCRQLDAQLQNKVIDRLPVLRLTTQ YRMHPDICLFPSNYVYNRALKTDMRTEENRFSKDWPFVPYLLFDVLDAHEIRESDSFVNL QEVKLVVELITLITKTKKSINYRNIGIITPYSAQKRRILLELEKEFGREEKGVAEVDTVD GFQGREKDCIIVSCVRAQSTQGSIGFLKSLQRLNVTLTRAKYSLFILGHLKTLMENKDWN ALIQDAQKRGSIIKTTSKTLYNSIPCYATGAKMILKPTSVQQRLTRATIGQVTTVATSGE APAKHPQPSSSGAPAPAPTPGSSRESPAQAQPSLVVPRFGQVTMAALMNEVPVQHPQPSS SGAPAPRNNGAPLMTASGHSSSSNPQATSQNRPRDPRLAKRAEEGVRRSPTESHSPTDPK RQKKTE NT seq 7041 nt NT seq  +upstreamnt  +downstreamnt atggagacgtgctgttggtgcacccctattgattcggttgtcaccaccttaaagaactat gcctattctttactgtctccagaaagatttgctgcagccaacgaagacctttgtttctgt ttggagtgtgtggatgagtatcataaagtgaaggatgactggtcatccttacatgagatc ctgtggaatcttgaaaccactcgtcttattgcccattttgagaaatcaatgccgaaggaa aaggatgacagcaattcgttggattgtgttgagggggaaagggtgcaatgcctggattct gacatcgagaaaaaacttagagtgccattgttggaaatactgaaatacccctacctgttg cttcataaacaactcagcatgctgtttgtggatgctatttgcaaaatggaggcaatcaac tacccctgccaggtgcttgggaaacacccaggggtctatttgctcatggtacaccctaat gaaacgatccgtcgatgggccattatgacagccaagagtctgggaaaggtggacagggac gattactatgacatacaggaagtgctaaattgcttgctcagagttatagagctgaacctc tttgaaaacgcttatgtttataaccccacaacagttgagaagggtaatctcatcttgttg cctgaccacctgtacgatattaccagttacaaaaactactggctaggtatatgtatggtg ctgctggtgctggatgagcaagccatggattcattgttgcttggcccaaacaaacagaac gactttatgcaatgcataataaatacccttaagaaagactcggatgatgaaagtaacagt cccttctggcctgcactccactgcttcatggtgatcctggataagcttgggtccaaagtg tgggggcagcacattgatccaagtgaggcatttcaaactattaacaacagcgtgagttac aataaagaaatagagaatattcgccaaaggtgcaagaggactagatctgtgccgctatca gattgtgaagatgaaatggtcacctgcagccaactggtgtatgactaccgcctagaaaag ccacagaaggttaccaggcagaaatctgctgcttgtcctaattacttccctgacttgtat gaagatatgaaaacattaattgatgcattccaggctgactttggccaagacatacagttg cacagcagcacttttctatggcttatccctttcatccactcccttatgggcctcagggag ctggggattggctacagcgtacaggttgtgagccacctgtgtttaaaaacggatgtctct gagaactctgctgaatcttatgacaaagtatctcagttctttatttgggtcctggtgatc gtgattcaactccaccttaagaaaaagtgcctgagttctctgtgggtcagcgcggaaaaa tgggtgcggacagtggtagcatgggcaaagcttccacgtgcagtgttcatggctggcatc gagagaagggcagccaggagctgcttaataagcacagctacatcaccatctctggaaaca gagtctgtgcagtctttctgcatgaaactgattcgtaatatcctgaaggaaggcttacat gatgtgaagactcccgtttgtaagcagttctttcttgaactcaacttgcttctccgtaac cgcatgaacttggagctgagtcccaagcagactcaagaattgcagagtactctgaagcat atcataaggaccatgtggatgaaatcaggaccttcttcccccatggtggagagctttccc attggtgtaaatgaaaggcaggaagacatgcatccagtgaatatgtgcaatgagcaccca cctcacttgtcagcagcaaggaaggatgaagtctgccaagaaggcgaagtacaagagggc tccatgttagcaaacagatacatgtatgttcaaaaaaccatgagctgtcaccagatacta gggatagacataaaggttgagaacatctggtcaggggtggagacacccagagcttccagt cctctgatgacaaagaatgatgacagcagtgatgctttggagaaaagtgttgatcagaat gaccttacaagccaaaggaaacgtctgagacctctgagccccatcttcaaggcgaagttg agacaactgcttaataagtgtagaagcagcaccatgctgaagtccaaaacaaagaaggag cagtcagttagagaccaaaggaaaagccaggaagggccgaagagtgatattgttgcaggt agcgctggcaacacatcggattcattgctctgcaaatcgggggcaggctcaagcaagtct ttccttagtctgtcagcctgtatgaaaaataaatgcaaggacggtctggtgaattttgaa acaggacattctgattctgaagaaggcagcagtgatgacatgaaggagaagatgccactt gacattgtggtgaggaatcagcagaatgaatttgaagcagctgtcgctgtcacttcaact agcacagcaacagatccccaaattaacatagtcgtcaataaaggcaccaaagaaacaccc gttgactctaggcaggaaagcagcaagaaagttatgggctctgttcaatctcagtcttcc agtgaagactacccttctaaggcagcaaagggaccaatccatacaattattatttctgat tcttcagaagaggatgaaaaccaagggaacactagtacagagagcagacaagatacaaca tgtgtgcgccatgagaagcaatccagtgcacaggggcaagagccaatgaattcctcacca acaaatgcggaacatgaatcacagttgtttgagttcgaatcagaagctgaaatttactca gaatggcaggacagccaaactaatgaggaaacgacagaggaggagaaccttttagtggag acagacaatggccacagagccactgacttggaaataaattactggggttatgagtcgaac cctcattggtttaatgccactgaagaagcaaaagaggaccctgtgcaaaacagtgaaact aaaacaaagccacatacaccagctcagaaggtcaacattagcagcagaaatgcaatgtgt tgctcgacttccacagggatggatgcagggtgttccagacacatagatccatcagcacct actgctccttcagagtcagcatctgctgtcaaagaatctactattcagccaaagaaggca ccaccacaggcagaaccagcaagatctactcctactgtggtcccacctgccaaagtccac cattttccacccccaacctcactgacagagaatcttggcctgtcaaagaaagtccgtaga gcagctgaactatctcagcgcacacaggacagtcttgctgagttgcgtcgtcatggggaa attgctggcagggtagatgttgcacagaaaagaacatcacaactaataaatgcttcacac ctaactactaaaaatagaaaaatgctttcttgccaagaacttcagttctataggcagaca aggcctaaagagagagagaagggtcagcacactcaaagaggaaacccaagttcctcaatc cttgaagctacagctagtaaaaccaatcccttgacctctaccgattcctcctctagctct tgtgatgaggatgtggctttgaaagagggagagccacaattgaatgagaacattgaagat gacaacttgtttcttacacagtccgatccagtggacatggagctgtgttcacaaatagaa agtggcagtaaccccacacacatggaagtcagtgtatctgcaagcccactacaggatgct aatgagatatgcaaggaagcaggttctaaaggagcagctgaagcagaggctcacggcgca agctgttctgctggtagcccacaagacaatgcgtctgccaagacttttgcaccccctagg ctctccacgatgaaaatcttcagcgtttcttcccggaatgcaaacctcaccaaggagctt gagagcatcccaaagcccccagcagttccaaagagcaaatcatattccttcatgcccccc acctcaaaggggaatggattgcagtcccaaatccccatgccgaacagcattctccaacca cagaattcgaacaacgtccctcagttgctaaatgtgcaaaacaactctaatgtgtatact ggtggggtgctgcctgcctccagacctgtttcctggcatgaaatgaatccacgcttcaca caagcaaacagcgtgaatgcccagcagagaagtcctgccatatttagtagagaaatcctg aagtggaactatgacatgtttgcacagttcagtcagtttgggccaccagcttacctcctc cagtctgttatgacttctgttccagccacttttaacaattacaatgactacttcaatact ttcttccccttaatgatgctaaatacctttgaaacagtggcacaagattggatagagaac cagaaatggaaagacaaaaggaatttccatttaactttgctgaacttcagtctggacaca aatgaagcagattttacagctaacctctcggagagcaatttggggagacagtacccaaag caagatgactttgtggtcttaacagtgtatgaaaagcaagcctttcatagcaaccctcat gaggcagaaagccgcccagtgtgccacgtcggttgcgtcactcgtttttattttaaatac aaagagcaggatgtcgttaatctgtctgtcaagacacaagggaatttgtcccgtatcgag aagaaagtaatgtgcctcaccgtttgttcattgtccaccatgcagcgaatgtttaaggcc cttcttctgcttaaccgaagccctctagccaaagccataatcagcacagaatattctgac ttctctctcatgggctcaaaagtggactctgagaattcttcttcgtacatgagagaattt aatgaagatcaaaggacagctattgaaacagcttatgcccttgtgacacagtctccttca ctgcccaaaatttgcttgatccatgggccacctggatctgggaaatctaagactatcctt ggactcctttactgccttttcatcgagagaccaggaaaagaaaattctgtgcaaagcaaa atcaagaaccgtgtgctgctgtgtgccccatccaacgctgctgtcgacgacctgatgaaa aaaataattcttatgttcaagggaaaatgccaggacagtagcagtcctttgggaaactgt ggtgacatcaacttggtgagactgggacaagaaagctccatcagcagggatgtctggaag tttagtctagatgcccaggtcgaccatgaaataagcaaagcagcccttggcagacatcaa gatatctgcaaacgaaaagaagacctggatcgacagctggacattatttgtcgccagcgt gctatagcaaaaacccaaagcgctggccagctgcaattattagacaaggagatttgcaga cttggagaggaaagaaagaggctcactgttcaactgaagaaggattgcggacgatcgcaa ggcgatttgaaagcgaacatcatcctgaagtcgcacatcatctgctgcacactgagcacc agtgggagtagcatgctggcatcagcattccggcggcagggctgtgaccctctgagctgt gtcattgtggatgaggctgcacagtcttgtgagatggaaagtctcatcccgctcactcat ggctgcaaaaaactggtcctggttggagacccaaagcagcttcctcccacagttaaatct atgactgctgaggaatacggctacgggcagtctctgatggagcggctgtgcaggcagctg gatgcgcagctccagaataaagtcattgacaggcttccagtcctgcgcttgaccactcag tacaggatgcaccctgatatctgcctcttcccgtctaactacgtctacaaccgtgccttg aaaactgacatgaggacagaagagaaccgattctctaaggattggcccttcgtaccgtac ctcctctttgatgttttggatgcccatgagatacgggagagcgattccttcgtcaatctc caggaagtgaaactggtcgtagaattaattacgttaattacaaaaacgaagaaaagcatc aactatcgtaacattgggatcatcaccccatacagtgctcagaaaagaaggatcttgctc gagttggagaaagaatttggaagagaagaaaagggcgttgcagaagtcgacactgtggat gggttccagggccgggagaaggactgcatcattgtcagctgtgtcagagcgcaaagcacg caagggtcaatagggttcctgaagagtctgcagcgtctgaatgtcaccctcacccgagcc aagtacagcctcttcatcctgggacacctgaagacgctcatggaaaataaagattggaac gcattgattcaggatgctcagaaaagaggctccatcatcaagaccacctccaaaaccctg tacaacagtattccttgctatgcaactggtgctaagatgatcctgaagcccacgtcagtc cagcagagactgactagagccacaattgggcaggtgaccacggtggccacatcgggtgaa gctcctgcaaaacatccccagccatcatcttctggtgctcctgctcctgctcctactcca gggagcagtagagaatctcctgcgcaagcccagccgagtctggtggtacccagatttggg caggtgaccatggcggccctgatgaatgaagtccctgtacaacatccccagccatcatct tctggtgctcctgctccaaggaacaatggggcacctctgatgacagcatctgggcactcc agttcctcaaacccacaggctacatctcagaataggccaagagatccgcggctggccaag agggcagaggaaggagtcagaaggagccccactgagagccatagccccacagatcccaag cgacagaagaaaacagagtag

DBGET integrated database retrieval system