Podarcis raffonei (Aeolian wall lizard): 128406729
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Entry
128406729 CDS
T09310
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128406729 (GAPVD1)
Membrane trafficking [BR:
praf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128406729 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
128406729
NCBI-ProteinID:
XP_053230316
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All DBs
Position
Z:complement(12860944..12910781)
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AA seq
1495 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNAEVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKVLEDTLFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQENTQSVIHTVFTSIYGNCIMPEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPSKLIDRFSPTQQEKLFGEKGT
EKFRQKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLDVG
EVRAMCTDLLLTCFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTSSEEGD
PRTKSYLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYMTHSQLTGLVGF
MRNVMSGDQLKEDRMALENLLLNLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLTAHINLVTPFATRSRSRSNIQVDQHADHDGFSQETIQEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPVDETKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGGPSGSNGVEALQLLEHEQATTQDNLDDKLRK
FEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLP
GSGSVLFDPCTGSTISETTSEAWSVEVLPSDSAILPRHVILVEAPDLKQEERLQELESCS
GVGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSP
DMDETAHGTSQGASTMSHAESLLAMFDPLSSSEAVVRPKVHYARPSHPPPDPPILEGTLG
GNEARLPNFSSHTAIIIDSEVFRQRYSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNE
ERELSVLGCVGGTPLLTASQSSSSSPSRDSCRGEVEDRKDSDDEKSDRNKPWWRKRFVSA
MPRAPIPFRKKEKQDKDKEDFVPDRYNALQDDSGPRLSAQAQAAEDILDKYRNAIKRTSP
NEGAVVTYDNADAIGDGESIHDSVRDDNLQNISADDLPDSASQAAQPQDSAFSYRDAKKK
LRLALCSADSVAFPMLSHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQIQE
TMRCVGRFDNRTCRKLLASIAEDYRKRAPYIAYLTQCRQGLQTTQAHLERLLQRVLRDKE
VANRYFTTVCVRLLLESKESKIRAFIQDFQKLTAADDKTAQVEDFLQFLYGVMAQDVIWQ
NASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQLLYDHIQRLSKVVTANHKALQ
IPEVYLREAPWPSAQSEIRTISAYKTPRDKLQCVLRMCSTIMNLLSLANEDSVPGADDFV
PVLVFVLIKANPPCLLSTVQYISSFYANCLTGEESYWWMQFTAAVEFIKTIDERK
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacattcacacgttggcccatcacctcaagcaggaacggctctatgtg
aactccgaaaagcagctgattcagagattgaatgctgaggtgctgaagactgctgaaaag
ctgtatcgcacggcatggatatccaagcagcagaggattaatttggaccggctaatcata
acaagcgcggaagcttcacctgctgaatgctgccagcatgccaaggtcttggaggataca
ctgtttgtggatgggtacaagcagttgggctttcaggagacagcctatggagaattcctt
aacaggctgcgtgaaaaccctcgccttattgcatcgtgcctggttgctggagagaagctc
aaccaggagaacacacagagtgtcattcacaccgtcttcacctccatctatggcaactgc
attatgccagaagacgaaagctacctcctccaagtcttgcgctacttgattgaatttgaa
ctcaaggaaagtgataatcccagacggctcctaaggagaggcacctgcgcattcagcatt
ctgttcaaactcttttctgaggggctcttttcagccaagctcttcctcactgccactttg
cacgagcccattatgcagctgttggttgaagatgaagaccacctggaaaccgaccccagc
aaattgattgaccgcttctcgcccacccagcaggagaagctctttggggaaaagggcaca
gaaaagttcaggcagaaagttcaggagatggtagaatccaacgaggccaagcttgtggcc
ctggtgaataagttcattggctacctcaagcagaacacctactgcttcccacacagctta
cggtggattgtatcccagatgtacaaaacgctctcgtgtgtggacaggcttgatgtcgga
gaagtgagagccatgtgcacggaccttctcttgacttgcttcatttgtcctgccgtggtc
aacccagagcagtatgggattatttctgatgccccaatcaatgaagtggcaaggttcaac
ctaatgcaggttgggagacttttgcagcagctggccatgaccagttctgaagaaggagac
ccccgcacaaagagttacctgggtaaattcgataaaggttgtgtggctgccttcttggac
gttgtcattggcggacgggcagtagagactccacccatgtcctcggtgaaccttttggaa
gggctgagtagaactgtggtttacatgacccatagccagctcactggcctggtcggcttt
atgcggaacgtcatgtcaggcgaccagctgaaggaggaccgcatggctctggaaaacctg
ctgttaaacttgccccagaacaagccagggaaaagcagcagcctggagatgaccccatac
aacaccccacagctttcccctgccaccacaccagcaaacaagaaaaaccggctgcctata
ggacaacagttggcagccatcactgcctgggatacgtctgccaccaacctgacagctcac
ataaaccttgtaaccccatttgctacccgaagccggagccgatcgaatattcaagtggac
cagcatgcagaccatgatggattctctcaggagacgatacaagaagttcaaccagaagaa
gtattggttatttctctcgggactgggccccaaataactccaggaatgatgtcagaaaac
gaggttttaaacatgcagcttgctgacggagggcaaggagatgtccctgttgatgaaacc
aaactccacggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggcccttcaaatcgctccaattctgtgtcatcgttggacttggagggg
gaatctgtgtccgaacttggtgcaggcggcccatcagggagcaatggggtggaagccctg
caactgctggagcatgagcaagcaaccactcaggataaccttgatgataagctccgtaaa
tttgagatccgtgacatgatggggttaacagatgacagggacatctctgagactgtgagc
gagacctggagcactgatgttctagggagcgacttcgatccaaatattgacgaggaccgc
ttgcaggaaattgcaggtgccgcagctgagaatatgctgggaagcttgctgtgtttgcct
ggttcaggatcggtgctttttgacccctgcacaggctcaaccatctcggaaaccaccagt
gaagcttggagcgttgaagtgctaccaagtgattcagcaatcctgcccaggcacgtgatt
ttagtagaggcaccagatctaaagcaagaggagaggctgcaggagcttgagagctgctct
ggggtggggagcacatctgatgacacagatgtgagggaggtcagttcccgccccagcaca
ccaggcctcagtgtcgtatcaggcattagcgcaacctctgaagacatcccaaacaagatt
gaggacctccgatccgagtgtagctctgactttggtgggaaggattcagtaaccagccct
gacatggatgaaacagctcatggaaccagccagggggcctctaccatgtctcatgcagaa
tccttgcttgccatgttcgatcccttgtcttccagtgaagcagtggtgaggcccaaagtg
cactatgcaagaccttcacaccccccgccagaccccccgatcctggaagggaccctagga
ggcaacgaggcaaggctgcccaatttcagctcccacactgctataatcattgactccgaa
gtgttcaggcagcggtattcctatcctgagaggctcgtgcggagcaggagctctgatata
gtgtcatctgcccggaggccaatgagtgaccctggttggaacaggcgagccggcaacgag
gagagggagctttctgtgcttggctgtgtagggggaactcctttgctgacagcctctcag
tcttcttcctcatctcctagcagagattcctgcagaggagaggttgaggatcgcaaagac
agcgacgatgagaaatctgaccggaacaaaccatggtggaggaaacgttttgtttcagct
atgcccagagctcccatcccatttagaaaaaaagagaagcaggacaaggacaaagaggac
tttgtgcctgatagatacaacgctcttcaagatgactctggccctagactgagcgctcag
gcccaggcagcggaggacatcctggacaagtacaggaatgcgattaagcgaaccagcccc
aatgagggggctgtagtgacctatgacaatgcagatgccattggagatggcgagagcatc
catgactctgtgcgggacgacaacttgcagaacatatccgcagatgaccttccggattct
gccagccaagcagcccagccacaggattcggctttctcttacagagatgcaaagaagaaa
ctgcggcttgccctctgttcagcagattctgtggccttccctatgttgtcccactcaacg
aggaacggccttccagatcatacggaccctgaagacaatgaaattgtatgcttcctaaaa
gtccagctagccgaagccatcaaccttcaggacaagaacctgatggctcagatccaggag
accatgcgttgtgttggccgctttgacaacaggacctgccgcaagctgctggcctcaatt
gctgaggattacaggaaaagggctccctatattgcctacctgacgcagtgccgccagggt
ctacagaccacccaggcccatctggaaaggctgttgcagagagtcctgcgagacaaagaa
gtggcaaaccgatacttcaccacggtgtgtgtgcggcttttgctggagagcaaagagtca
aagataagggcgttcattcaagatttccagaagctgacggcagcggatgacaaaactgcc
caagttgaggacttcctccagtttctctacggtgtaatggcccaggatgtcatctggcag
aacgccagcgaggagcagctccaggatgcccagctggcaattgagcgcagcgtcatgaac
cgcatcttcaaactggccttctaccctaaccaggatggagacatcctgcgtgaccagctt
ctttacgatcacatacagaggttatctaaagtggtgactgcgaaccataaagcactccag
attcctgaggtctacctccgcgaagcaccatggccatcagcacagtctgagatccgcacc
atcagcgcctacaagaccccccgggacaagctgcagtgtgtcttgcggatgtgctccaca
atcatgaacctgctgagcctggcaaacgaagattctgttcctggggcagacgactttgtc
cctgttctcgtctttgttctcataaaggccaatccgccctgcttgttgtccactgtccag
tacatcagcagtttctacgccaactgtttaactggagaagaatcctactggtggatgcag
ttcacagcggcagttgagttcattaaaacgatagacgagcgcaagtaa
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