Podarcis raffonei (Aeolian wall lizard): 128406786
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Entry
128406786 CDS
T09310
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128406786 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128406786 (ATRX)
03036 Chromosome and associated proteins [BR:
praf03036
]
128406786 (ATRX)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128406786 (ATRX)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128406786 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128406786
NCBI-ProteinID:
XP_053230440
LinkDB
All DBs
Position
Z:22106418..22204609
Genome browser
AA seq
2386 aa
AA seq
DB search
MTAEPVRYAAAPRYSPGHGGRESKLTTLVQKLHDFLAHSSEESEDAKSPPRLTIDKFAMT
ENIPTPVPTPMENCREEGSSSSEKSKSLCSPRSKRKPTVVTKYVGSDDEQTLDETTNQDV
SNENSENEVDMKSLPKGTIVVQPEPVRNEDKDDFKGPEFRNRNTARTKPEAQKKRGEEGL
HGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCFKYYMSDDISRDADGIDEQCRWCAE
GGNLICCDFCHNAFCKKCILRNLGRKELSTILDENSQWHCYICQPEPLLDLVTACDSVFE
NLEQLLQQNKKRIRVDNDKGKIYDNTLKYSLKKNSSSCNGEEKKQNHPHSGALTYSYKAL
MVPKVLLKKTKKLVETTTNMNASFVNFLKQAIENSEINPTVQLRQLKAFKSVLSDIKKAH
MALDEDLNFEIRSLDSKTKQKNTKDSETAINLDTGEEKKTEGKEIKEHKVGLEVSEHTDP
NVPIIDQSGNKKPNCKDKKAVKIDLQYEPNRAEATDMDIVSIPSSVPEDIFESCMEAQKA
AGEQGSGSRATEQGAVNADIRSKDSRKGMKLIPTTKVTKTLVVKLTPVSLASSSVKAEDP
DGKPEKGDELEDGKENHGTECPPESKITPLVEDHDLRRSPRVKTTPLRRPTDINTLLCNS
EEDSNDAYSEKQRRKSTPSKRKKDKPDSPVTTVHSPQSNTFSETNKPDTMDQSSDSDEVP
AVLQAAATSSHSTSDTDSNSETPKDVLNALKRRPAKMDNGKRKRKSSSSGSDSDAKEEKA
KQDLIAAAKKQRQNCSDSSNNDSELERENFSKTESARKAAKKEPKKDNDSSEEEQIKEGK
RNSKQKGEVCNEVDDVEVSAPGKEKLDNSLEDAPCKELGFKGRRTRDFKGRASKGKQNMS
PEKESSISGKISEPLAKEGCDVSSDDIGLSLKPEQTGESSDDARNKAKKGTEGKESGNRR
KISTRGQGDSSSEMEKFSPEKESCSSGSKGKKQSTAENKKNSKERVSKKLQGNASDTAKS
PKNEQVCDTSEDNLNVKRNNAKEKKKVSPKRRNSKQVRGDLLSSSEEDLYEEKKKKKRGA
VTKGNSKSNRKERGNINVKKAKNETLNSSTTSPSSSNEAENEDLNSAGEASSDEQKIKPV
TESLLAPATIGFCQSSGDEGDNKSQTVPMEEEEDDDDDPENRIAKKMLLEEIKANLSSED
ETSSDEESDEEKKKKGKHYEKRGDNGENEQEDESDSDSDADGAKKPRYRHRLLRHKLTTS
DGESEEEKKEKAKEAKEVKRRNRRKVSSEDSDNSEANESGVSEEVSESEDDQRPRTRSAK
KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSDDDDNDDSKSPGKGRKKIRKILKDDK
LRRETQNALKEEEERRRRIAEREREREKLREVIELEDTPMKCPITTKLVLDEDEETKEPI
VQVHRDIVTKLKPHQVDGVQFMWDCCCESVKKTRKSAGSGCILAHCMGLGKTLQVVSFLH
TILLCDKMDFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYLL
QRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVICDEGHILKNEAS
AVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQC
ADSTLADVRVMKKRAHILYEMLNGCVQRKDYTALTKFLPPKYEYVLAVRMTPLQCKLYQF
YLDNLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDE
FIASDSDETSVSLSSEEEIKKKKPKGKKKESSSSESGSDNDVEVIKVWNSRSRGGGEGNI
EEPINNPPAIAKTDEGKTASNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEE
LGDKVLVFSQSLISLDLIEDFLELANRDKEEDKPIIYKGEGKWFRNIDYYRLDGSTTAQS
RKKWAEEFNDVTNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRF
GQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDL
LDDPNSEKKKKRDTPMLPKDTILAEILQICKEHIVGYHEHDSLLDHKEEEELTEEERKAA
WDEYEAEKKGLTMRFNMPVGANMFPTNFNAQAPYIPFNLAALSAMSNQQLEDLINQGREK
VLEATNNVTGARIQPLEDIISSIWKENLTLTESQVQSLALSRQATQELDVKRREAIYNDV
LTKQQMLIGCVQRILMSRRLHQQYSQQQPQQLTYQQAAQHVAQQAAMSHAMMPKPGLIMN
PSSFQQIDMRGMYQSVAGAMQHPPPLQRAPLPMSGKGPGPSQGKPM
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagcccgtgaggtacgcggcggcgcctcgctactctcccggccatggcggg
cgtgaaagcaagttgacgacattggtgcagaagcttcatgactttttggctcactcatca
gaagaatctgaggatgcaaagtctcctccaagattaactatagataaatttgctatgacg
gaaaatattccaactccagttccaactccaatggaaaactgcagggaagaaggtagcagc
tcttctgaaaagtccaaatcgttatgttcaccacgttccaaaaggaaacctacagttgta
acaaagtatgttggctcagatgatgaacagaccttagatgaaaccacaaatcaagatgtt
tcaaatgaaaactccgaaaatgaagttgatatgaaaagcttgcctaaaggtacaattgtt
gtacagccagagccagtacgtaacgaagacaaagatgactttaaaggacctgaatttagg
aacagaaatactgctagaacgaaacctgaagctcaaaagaagcgtggagaggaagggcta
catggtattgtgagctgtacagcttgtggtcagcaggtgaatcattttcaaaaggattca
atctatagacatcccacattaaaagtacttatatgtaagacttgcttcaaatattatatg
agtgatgacatcagccgtgatgcagatggaattgatgaacagtgtagatggtgtgctgaa
ggtggaaacttaatttgctgtgacttttgccataacgccttctgcaaaaaatgtatatta
cgaaacttaggacgaaaagaactatcaaccatactggatgaaaacagtcaatggcattgc
tatatctgccaaccagaacctttgctggacttggttactgcctgtgatagtgtgtttgaa
aatttagaacaattattacagcaaaataaaaagagaatcagagttgacaatgacaaaggt
aaaatatatgataatacacttaaatattctctgaagaaaaatagttcaagttgtaatgga
gaagaaaagaaacaaaaccatccacattctggtgctctcacctattcctacaaagcactg
atggtgccaaaagtcctgcttaaaaaaactaaaaaactagttgaaacgacaacaaatatg
aatgctagttttgttaattttttgaagcaggcaattgaaaattctgaaataaacccgacg
gtgcaattacgtcagctgaaggcttttaaatctgtgttgagtgacataaaaaaggctcat
atggcattggacgaagatctgaattttgagattcggtctctagattctaaaaccaagcaa
aaaaacaccaaggatagtgaaactgcaattaatttggataccggtgaagagaagaaaacg
gaagggaaagaaataaaagagcataaagttggattagaagtcagtgaacatacagatcca
aatgtaccaataattgatcaatcaggaaacaaaaaacccaactgcaaagataaaaaagct
gtgaaaattgatcttcagtatgaacccaatagagctgaggcaacagatatggatattgta
tcaattccctcatcagttcctgaagatatttttgaatcttgtatggaagcacaaaaagct
gccggtgaacagggcagtggaagtagagcaacagagcaaggggcagtaaatgcagatata
agatctaaagacagcaggaaaggaatgaaattgataccaacaacaaaagtaacaaaaaca
ttggttgtgaaactgactccggtttccctcgctagttcttctgtaaaagctgaagatcca
gatggaaagccagaaaagggagatgagctcgaagacgggaaagaaaatcatggcactgaa
tgtccacctgaaagtaaaattactcctttggtagaagatcatgatctcagaaggtctcca
cgtgttaaaactacacctctgagacgcccaacagacataaacaccttactatgtaattca
gaagaggacagcaatgatgcatacagtgaaaaacaaaggagaaaatccacaccatctaaa
aggaaaaaagataagccagactctcctgttactacagttcacagtcctcagtctaacaca
ttttctgagacaaacaaaccagacacaatggaccaaagctctgattctgatgaggtgcct
gcagtcctgcaagcagcagccacaagcagccacagtacttcagatactgacagcaacagt
gaaacacccaaggatgtgttaaatgctttaaagaggcggccagcgaagatggacaatgga
aagcgtaaaagaaaaagttccagttctggatcagattccgatgctaaagaggaaaaagca
aagcaggatttgattgcagctgcgaaaaagcaacgccagaactgttcagattcttccaat
aatgattctgagttggagagagagaattttagtaaaacagagtctgcaagaaaagctgca
aaaaaagaaccaaagaaagataatgattcttcagaagaggaacaaattaaagaaggaaaa
agaaattccaagcagaagggtgaagtgtgcaatgaagtggatgatgttgaagtctctgct
ccaggaaaagaaaagctagacaattctttggaagatgcaccttgtaaagagctaggtttt
aaggggagacgaacaagggatttcaaagggagagcctccaaaggtaaacagaatatgtct
ccagaaaaagagagtagcatttcaggcaagataagcgaaccactggcaaaggaaggatgt
gatgtttcttctgatgatataggactgtcactaaagccagaacaaactggtgaatcatca
gatgatgctagaaataaagctaaaaaaggcacagaaggaaaggaaagtggaaatcggaga
aaaatttctacaaggggacaaggtgattcctcttctgaaatggagaagttttctcctgaa
aaagagagttgttcttctggaagtaaaggcaagaaacaaagtactgctgaaaataaaaag
aactcaaaagaaagggtttctaagaagttgcagggtaatgcttcagacactgcaaagtct
cccaaaaatgaacaggtctgtgatacttcagaagataatttaaatgtaaaaagaaataat
gctaaagaaaagaaaaaagtaagccccaaaagaagaaattccaaacaagttagaggtgac
ttgctttcctcttctgaggaagacttgtatgaggagaaaaagaaaaaaaaaagaggggca
gtcactaagggaaattccaagagtaatcgtaaagagagagggaatattaatgttaaaaag
gcaaagaatgaaaccctcaattcctctaccacatcaccatcatcatccaatgaagctgaa
aacgaggacctgaattcagcaggcgaggcaagcagtgatgaacagaaaattaagcccgtg
acagaaagtttattggcaccagcaacaattggattttgtcagtcttcaggagacgaagga
gacaataaatcgcagactgttccaatggaagaggaggaagatgatgacgacgatcccgag
aatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcctcagaggat
gaaacttcttctgatgaagaatctgatgaagagaaaaagaagaaaggaaagcattatgaa
aaaagaggtgacaatggagagaatgaacaggaggatgagtctgactctgattcagatgct
gatggggctaagaaacccagatacagacaccgcttgttaagacacaagttgaccacgagt
gatggagagtctgaggaagagaaaaaggaaaaagctaaagaggcaaaagaagttaaacgc
aggaacagaaggaaagtaagcagtgaggattcagataattcggaagcaaatgaatctgga
gtcagtgaagaagtcagtgaatctgaagatgatcagcgtcctagaacaagatctgccaag
aaagctgaattagaagaaaatcagcgaagttacaagcagaagaagaaaagaagacgcata
aaagtccaggaggattcatccagtgagaacaagagtaattctgatgatgatgataacgat
gattcaaaatctcccgggaaaggcaggaaaaaaatacggaagatacttaaagatgataag
ctcagaagagaaactcaaaatgctctgaaagaagaggaagagagaagacggcgcattgcg
gaaagggaacgtgagagggagaagctaagagaagtgatagaactagaagatacaccaatg
aaatgtccaattacaactaagctggttttagatgaagatgaagaaaccaaagaacctata
gtacaagttcatcgtgacatagttacaaagctgaagccacatcaagttgatggtgtacag
tttatgtgggattgctgttgtgaatctgtgaaaaaaacaaggaaatctgcaggctctgga
tgcattcttgcccactgtatgggtctgggaaagaccttgcaggtagttagttttcttcat
actattctgttgtgcgacaagatggatttcaggacagctcttgttgtttgtccgctgaac
acagccctgaattggttgaatgaatttgagaaatggcaagaaggcttagaagacgatgag
aaacttgaggtctgtgaactagcaacagtgaaacgccctcaagagagaagctatctgctc
caaagatggcaggatgaagggggtgtaatgatcataggctatgagatgtaccgtaacctt
gcacaagggagaaatgtgaagagcaggaaactcaaggaaatatttaacaaagcactggtt
gatccaggccctgactttgtcatatgtgatgaaggacacatactgaaaaatgaagcatct
gctgtttctaaagctatgaattctataagatccaggaggaggatcattcttacaggaact
ccattacaaaacaacctcatagaatatcactgcatggttaattttatcaaggagaatttg
cttgggtcaattaaggagttccgaaatcgatttataaatcccatccagaatggtcagtgt
gcggactctaccctggctgatgtcagggtgatgaaaaaacgtgcccacatcttgtatgaa
atgttaaatggatgtgttcagaggaaagattatacagcattaacaaagttcctgccacca
aaatatgaatatgttctggctgttagaatgactcctcttcagtgtaaactgtatcagttc
tacttggataatctaacaggtgtcggcaacagcagtgaaggtggaagaggcaaagctgga
gctaagctcttccaagatttccagatgttaagcagaatttggactcatccttggtgcttg
cagctggactatattagcaaagaaaataagggctattttgatgaagatagtcttgatgaa
ttcatagcttctgattctgatgaaacatcagtgagcttaagctctgaggaagagatcaag
aagaaaaaaccgaagggtaaaaaaaaggagagtagcagcagtgaaagtggaagtgataat
gatgttgaagtgattaaagtctggaattcaagatctcgtggaggtggagaaggaaacata
gaagaaccaataaacaatcctccagccattgcaaagacagatgaaggtaaaactgcttcc
aacccaggcagcccagctccagattggtacaaggattttgtcactgatgcggatgctgaa
gtgttggagcattctggaaagatggtgcttctttttgaaattcttcgcatggctgaggag
ctcggggataaagtcttagtgttcagccagtctctgatatcactggatttgatagaagat
tttctggagttggcaaaccgggacaaagaagaagacaaacctattatatataaaggtgaa
gggaaatggttcagaaatatagattattatcgtttagatggctctacaacagcacaatca
agaaagaagtgggctgaagaatttaatgatgtaacgaatgtcagaggccgtttgtttatt
atctctactaaagcaggatcccttggaataaacctggtggctgcaaatagagtaattatt
tttgatgcttcttggaatccatcatatgatatccagagtattttcagggtttatcgcttt
gggcaaaataaaccagtgtttgtgtaccgcttcttggctcagggaacaatggaagacaag
atctacgatcgtcaagtaactaaacagtcactatctttccgggtggttgatcagcaacag
gttgaacgccattttaccatgaatgaactcactgagctgtatacttttgagccagacttg
ttggatgatcctaattcagaaaagaagaaaaaaagggatacacctatgttaccaaaagat
acaattctagctgaaatcctccagatctgcaaagaacatatagtgggctatcatgaacat
gattccctcctggaccacaaagaggaagaagaattgactgaagaggagaggaaggcggct
tgggatgaatatgaagctgaaaagaagggcctgacgatgcgtttcaacatgccagtgggg
gcaaacatgttccccaccaactttaatgctcaggctccatatattcctttcaatttggca
gcattgtctgctatgagcaaccagcagcttgaggacctcattaatcaaggcagagaaaaa
gttttggaagctaccaacaatgttactggagcaagaattcaaccccttgaagacatcatt
tccagtatatggaaggagaatctgacgctcacagagtcccaggtccagtctttagctcta
agccgacaagcaacccaggagttggatgttaagcgccgggaggccatctataatgatgtc
ctgacaaagcagcagatgctaatcggttgtgttcagaggattctgatgagcagaagactc
catcagcagtacagccagcagcagccacagcagctgacctaccagcaagcagcgcagcac
gtggctcagcaagcagccatgagtcatgcaatgatgccaaagccgggtttgattatgaat
ccttccagcttccaacagatagatatgagagggatgtatcaatctgttgctggtgcaatg
cagcacccaccccccttgcagcgggctcctcttccaatgagcggcaaaggcccaggacca
tcccaagggaaaccaatgtga
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integrated database retrieval system
