Podarcis raffonei (Aeolian wall lizard): 128407023
Help
Entry
128407023 CDS
T09310
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128407023 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
128407023
NCBI-ProteinID:
XP_053230981
LinkDB
All DBs
Position
Z:18946320..19040404
Genome browser
AA seq
2531 aa
AA seq
DB search
MRPLGVRSPRGCCCLLLLALLPAFAQGIQCSQASESCLNGGRCETYPNGTGVCRCPSSHV
GSRCHLQNPCLSYPCKNAGTCQPIVRGNVAEYTCACHLGYTDKLCLTPEENACLSSPCHN
GGSCDLVTLTEYKCRCPPGWSGKTCQQADPCASNPCANSGQCVPFESTYVCKCPSGFHGA
TCKEDTNECSRSPAICKNGGTCSNVVGSYQCRCRQAYTGQNCEHLYVPCNPSPCQNGGTC
RQTGDTTYECTCLPGFAGQNCEENLNDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCA
EDVDECQLIPNACQNGGTCHNTHGSYNCVCVNGWTGEDCSENIDDCANAACFVGATCHDR
VASFYCECPHGRTGLLCHLNDACISNPCNDGSNCDTNPVTGKAICTCPSGYMGPACNQDV
DECSLGANPCEHAGKCLNTEGSFECQCQQGYSGPRCEIDVNECSSNPCQNDATCLDQIGV
FHCICMPGYEGIYCEINTDECASSPCLHNGNCVDKINEFACECPRGFNGHLCQYDIDECA
STPCKNGAKCVDGPNAYTCECTEGFSGPHCETDINECDPDPCHYGTCQDGIATFTCLCQP
GYTGRLCDMNINECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEVNLDDCASNPCDYG
KCIDKINSYECTCEPGYAGRMCNINIDECASNPCHNGGTCRDGINGFVCVCPEGYHDPMC
LSEVNECNSNPCIHGKCNDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTS
GYICTCQEGFSGPNCQTNINECASNPCLNQGTCIDDVARYQCNCLPPYTGPTCRDVLAPC
ADGPCKNGGKCRESEDFESFSCACPPGWQGQTCEIDINECVKSPCRNGAACQNTNGSYWC
VCKPGFTGNTCETDVDDCQPNPCHNGGSCSDGINAFFCDCLAGFRGPKCEEDIDECASNP
CKNGANCTDCVNSYTCTCPSGFSGIHCEHNTPDCTESSCFNGGTCVDGINTFTCVCPPGF
TGIYCEHDINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLSCQNLVRWCDSSPCKNGGK
CWQTDNLYRCECTSGWTGLYCDVPNVSCEVAARQQGVEVVHLCRNSGLCVDRGNTHSCQC
QAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGINCSEEINECLSHPCQ
NGGTCIDLINTYKCSCPRGTQGVHCEINIDDCSPPFDPNTFAPKCFNNGRCVDRVGGYSC
ICLLGFVGERCEGDVNECLSNPCDPLGTQNCVQRINDYVCECRLGYSGRHCETVVDGCRN
QPCKNGGTCAVASNTQHGYICRCPPDWDGATCENDARGCGPLRCLNGGTCISTQKSSRCL
CPLGFSGAACQFSSGSPCHSSPCYNGGTCQPAKEPPHYRCNCPARFNGLNCHILDYDFTG
GLGQNITPPPLEEKCEIPVCASHAGNKICDAQCNNHACGWDGGDCSLNFNDPWKNCSQSL
QCWDYFNNGRCDTQCNNTGCLYDGFDCQKMEGQCNPLYDQYCKDHFSDGHCDQGCNNAEC
EWDGLDCANNVPEKLADGTLVVVVLTSPENLKNNSLNFLRELSRILHTNVVFKKDEQGEY
MIFPYYGKPEELKKHHIKRSLASWPDVSDAVFKIRSKLYKTIIDRHRREMDHVDICGSIV
HLEIDNRQCVQSSSQCFQSTTDVAAFLGALASRGNLDFPYKIEAVKSESTDPEKSTQWYP
MYMVVPGVFLLLFIGFGVLASRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKP
LKNASNGTLMDDNQNEWGDEETLDTKKFRVEEQAMLPDMNDQADHRQWTQQHLDAADLRI
SSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLEMGNSEEEEDAPAVISDFIY
QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDHMGKTPLHAAVSADAQG
VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLISCHADVNAVDDLGKSALHWA
AAVNNIDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDNFANRDITDHMDR
LPRDIAQERMHHDIVRLLDEYNLVRSPPLHSGPLGAPTLSPPLCSPSSYIGSLKPAMQGK
KARKPSAKGLICNGKESSKDLKARRKKSQEGKGCLLDSSSVLSPVDSLESPRGYLSDVAS
PPLMTSPFQLSPSMPLNHLPGMPDAHLSMNHLNLVGKQDLGLGASRMQQPFDSVPPRLSH
LPTSNATVMNFTVSGAPGLSGQCSWLSQMQSGIQVQGQYNPMRNGLQQGALPQGQALQHG
LLTSLHNGLPTTTLSQIMNYQAMPNGRLPANAQPHLLQAQQLQQIQQQNMQQQQQTHSTA
PNAGSANFLGNELGQPDLQQQVNGGALAVHTILPQDTQVLATSLPSALTQPMTTTQFLTP
PSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNLSDWSEGISSPPTSMQ
SQMGHIPEAFK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgcggccccttggggtgcggagcccccgcggctgctgctgcctcctgctgctggcactg
ctgcccgccttcgctcaaggcatccagtgttcccaggcttcagagtcctgcttgaatgga
ggaaggtgtgaaacctaccccaatggaacaggggtttgccggtgccccagctctcatgtg
ggcagccggtgccacctgcagaacccgtgtctcagctacccctgcaagaatgcgggcacc
tgccagcccatcgtccgtggcaacgtggccgagtatacctgtgcctgccacctaggctac
actgacaagctgtgccttactcctgaggagaacgcgtgcctcagcagcccctgccacaat
ggagggagctgtgaccttgtcacgctgacggaatacaagtgccgctgccctccaggatgg
tcaggcaaaacgtgccagcaggcagacccttgcgcctccaacccttgtgccaacagtggg
cagtgtgtgcccttcgaatcgacctatgtgtgcaagtgcccatcgggcttccatggggcc
acgtgcaaggaggacaccaacgagtgcagccgctcccccgccatctgcaagaacggcggc
acctgcagcaacgtggtgggctcctaccagtgccgctgcaggcaggcctacacaggacag
aactgcgagcatctttacgtcccctgcaacccctcgccttgccagaatggaggcacctgc
cggcagaccggagacaccacctatgagtgcacctgcctgccaggttttgctggtcagaac
tgtgaggaaaatctcaatgactgcccaggaaacaactgcaagaatggagggacctgcgtg
gacggggtgaacacctacaactgtcagtgcccccctgaatggacaggccagtactgtgca
gaggatgtggacgagtgccaactgatccccaatgcttgccagaacgggggcacgtgccac
aacacccatggcagctacaactgcgtctgtgtcaacggctggacaggcgaggactgcagc
gagaacattgacgactgcgccaacgctgcctgcttcgtgggagccacctgccacgatcgt
gtggcctctttctactgcgagtgccctcatggacggacaggtctgctttgccacctcaac
gatgcttgcatcagcaacccctgcaatgatgggtccaactgcgacaccaacccagtcact
ggcaaggccatctgcacctgcccctctggctacatggggcctgcctgcaaccaggacgtg
gatgaatgctcgcttggtgccaacccctgtgagcatgcggggaagtgcctgaacacagag
ggctccttcgaatgccagtgccagcaaggctactctggcccccgctgtgagattgatgtg
aatgagtgctcctcaaacccctgccagaacgatgccacctgcctggaccagattggggtc
tttcactgcatttgtatgccaggctacgagggcatctactgcgagatcaacacggacgag
tgcgccagcagcccctgcctgcacaacgggaactgtgtggacaagatcaatgagtttgcc
tgcgagtgccccagaggtttcaatggccacctatgccagtacgacattgacgagtgtgcc
agcaccccgtgcaagaatggtgccaagtgtgttgatggccccaatgcctacacctgtgaa
tgcactgaaggcttttctggcccccattgtgagactgacattaacgagtgtgacccagac
ccttgccactatgggacctgccaagatggcattgccaccttcacctgcctctgccagcca
ggctacacggggcgtctctgtgacatgaacatcaatgagtgccagagccagccttgcaag
aacgggggcacctgccaggatcggaacaatgcttataactgcctctgcctcaaagggacg
acagggcccaattgcgaggtcaacctggatgactgcgccagcaatccgtgtgactatggc
aagtgcattgacaaaatcaatagctacgagtgcacctgtgagcctggatatgcagggagg
atgtgcaacatcaacattgacgaatgtgccagtaacccttgccacaatggaggcacttgc
agggacggcatcaacggcttcgtttgcgtctgcccagagggctaccatgatcccatgtgc
ctctcggaagtcaatgagtgcaacagcaacccctgcattcacgggaaatgcaatgatggc
ctgaatggctacaagtgcgattgtgacccaggctggagcgggacaaactgcgacatcaac
aacaacgagtgcgaatccaacccttgtatgaatggtggcacctgtaaagatatgaccagc
ggctacatctgtacctgccaggagggcttcagcggtcccaactgccagaccaacatcaac
gaatgcgcctccaacccatgcctgaaccaagggacctgtattgatgacgtggcccgttac
cagtgcaactgtcttccaccctacaccgggccgacctgtcgggatgtcctggctccatgt
gcagacggtccctgcaagaacggtggcaagtgcagagaatctgaagattttgagagcttc
tcttgtgcctgccctccagggtggcaagggcaaacctgtgagatcgacatcaacgagtgc
gtgaagagcccttgtcggaatggtgccgcatgtcagaatacgaacggtagctactggtgt
gtctgcaaacctgggttcacaggcaacacctgcgagacggacgtcgatgactgccagcct
aatccttgccacaacggcgggtcctgctccgatggcatcaatgcctttttctgtgactgc
ctcgctggcttccggggccccaagtgtgaggaggacattgacgagtgtgccagcaaccct
tgcaagaatggcgccaactgcacggactgtgtcaacagctacacctgtacttgcccttct
ggctttagcgggatccactgcgagcataacacccccgactgcacagaaagctcctgcttc
aatgggggcacatgtgtggacggcatcaacaccttcacctgtgtctgtccacctggcttc
acgggaatctactgcgagcacgacatcaatgagtgtgactccaaaccctgcctgaatggc
ggcacctgccaggatagctacgggacctacaagtgcacttgtcctcagggctacactggc
ctcagttgtcagaacctggtgcgttggtgtgactcctcgccctgcaagaacggcggaaag
tgctggcagacagacaacctgtaccgctgcgagtgcaccagtggctggactggactctac
tgcgatgtccccaatgtctcttgtgaagtggctgcacggcagcaaggcgtcgaggtggtg
cacctatgcaggaactctgggctctgtgtggacaggggcaacacccactcttgccagtgc
caggccggctacacaggcagctactgcgaggagcaggtggatgagtgctcccccaacccg
tgccagaacggggccacctgcacagactacctagggggctactcgtgtgagtgtgttgct
ggctaccacgggatcaactgctcagaggagatcaacgagtgcctttcccacccctgccag
aacggagggacctgcattgacctcatcaacacctacaagtgctcttgtccccgagggact
caaggagttcactgtgagatcaacatagacgactgcagcccaccctttgaccccaacacc
ttcgcccccaagtgcttcaacaacgggcggtgtgtggaccgcgtagggggctacagctgc
atctgcctgctgggctttgttggggagcgctgtgagggtgacgtcaacgagtgtctgtcc
aacccttgtgacccgctaggaacacagaactgtgtgcagcgcatcaacgactacgtgtgc
gagtgtcgtctggggtattctgggcgccactgtgagacggtggtagacggctgccggaac
cagccctgcaagaacggtgggacctgtgcagtggccagcaacacacagcacggctacatc
tgcaggtgccctccggactgggacggtgccacgtgtgagaacgacgcccgcggctgcgga
ccgttgcgctgcctgaacggcggcacctgcatctccacccagaagagctccaggtgcctc
tgcccactgggctttagcggagctgcctgccagttctcctctggcagcccctgccactcc
agcccctgctacaacgggggcacctgccagcctgccaaggagccaccccactaccgctgc
aactgcccagcccggttcaacggtctgaactgccacatcttggactacgacttcacaggt
ggccttggccagaacatcactccacctcccttggaggagaagtgtgagatccctgtgtgc
gccagccacgccggcaacaagatctgtgacgcccagtgcaataaccacgcttgcggctgg
gacggcggcgactgctccctgaatttcaacgacccctggaagaactgctcccagtccctc
cagtgctgggactacttcaacaacgggcgctgtgacacccagtgcaacaacaccggctgc
ctgtacgacggtttcgactgccagaagatggaggggcagtgcaaccctctgtatgaccag
tactgcaaggaccacttctctgatggacactgcgaccagggctgcaacaacgcggagtgt
gagtgggacggtctcgactgtgccaacaacgttcccgaaaagctggcggacggcactttg
gtggtggtggtgctgacctctccagagaacctaaagaacaactccttgaacttcctgcgg
gagctcagccgcattcttcacaccaatgtggtcttcaagaaggatgagcagggcgagtac
atgatattcccctactatggcaagccagaggagctcaaaaagcaccacatcaagcggtcg
ttggcgagctggccagatgtgagtgatgctgtcttcaagataagatctaagctatataag
accatcattgacagacacaggagggagatggaccatgtggacatctgcggatcaatcgtt
cacctggagattgacaatcgccagtgtgtccagtcctcctctcagtgcttccaaagtacc
acagatgtggcagccttcctcggtgctttagcctcgcggggcaacctggacttcccatac
aaaatcgaagctgttaaaagtgaaagtactgaccccgaaaagagcactcagtggtaccct
atgtacatggtggtgcctggtgtcttcctcctcctcttcattggtttcggggttctggca
tcgcgcaagcggcggagggaacatgggcagctctggttccccgagggcttcaaagtgacc
gagtccagcaagaagaagcgcagagagcccctgggggaggattctgtggggctgaaaccc
ttgaaaaatgcttccaatgggaccctgatggacgacaaccagaatgagtggggtgatgag
gagacactagacaccaagaagttcagggtggaagaacaggccatgttgccggacatgaat
gaccaggctgaccacaggcagtggacacagcagcacctggatgcagccgacctgcgcatc
tcctccatggcacccaccccaccccaaggggaaattgatgctgactgtatggatgtcaac
gtgcgaggaccagatggattcacgccactgatgatcgcctcctgcagcggaggtgggctg
gagatgggcaacagtgaagaggaggaggacgccccagccgtgatttcagacttcatctac
cagggggccagcttgcacaaccaaacagaccgcactggggagacagccctccacctggcc
gcccgctactcacgctcagacgcagccaagagactgctggaagccagtgccgatgccaac
atccaggaccacatggggaagacgccactccacgctgctgtctcggccgacgctcagggg
gtcttccagattctgatcaggaacagggccaccgacctggatgcccgcatgcacgatggg
accacccctctcatcctggctgcccgtttggctgtggagggcatgctggaagacctcatc
agctgccacgcagatgtcaatgcggttgatgacctagggaaatcagcactgcactgggct
gctgccgtgaataatattgatgccgctgttgtgctgttgaagaacggggcaaataaagac
atgcagaataacaaggaggagacccctctgttcctggcggccagagaagggagctacgag
acggccaaggtcctcctagacaacttcgccaaccgggacatcacagaccacatggaccgc
ctgccacgggacatcgcccaggagcgcatgcaccatgatatcgtccgcctcctggacgag
tacaacctggtgcgcagccctcctttgcacagcgggcccctgggggcacctaccctctcc
ccgcccctctgctcgcctagcagttacatcggcagcctgaagccagctatgcagggcaaa
aaggcgcggaagcccagcgccaagggactgatctgcaatgggaaggagtcctccaaggac
ctcaaggcccgccggaagaagtcgcaggagggcaaaggctgcctgctggacagctccagt
gtcctctccccagtcgactccctagagtctccccgtgggtacttgtctgatgtggcatct
cctcccttgatgacctcccccttccaactgtcgccctccatgcccctcaaccacctgcca
gggatgcccgatgcccacctgagcatgaaccacctcaacctggtgggcaagcaagacctt
ggcctgggtgccagtcggatgcaacagcccttcgactcggtgcccccgcggctctcccac
ctgcccacctccaacgccactgtcatgaatttcaccgtgagcggagcacctggcctgagc
gggcaatgcagctggctgagtcagatgcagagcggcattcaggtgcagggccaatacaac
cctatgcggaatggcctgcagcagggggcactcccgcagggccaggcccttcagcatggt
cttctgacctccctccacaacgggctgcccaccaccaccttgtcccagattatgaactac
caggccatgcccaacggccgcctgccagccaatgcccagccccatctcctgcaggcacag
cagctgcagcagatccagcagcaaaacatgcagcagcagcagcagacccacagcactgcc
ccaaatgccgggagtgcaaacttcctggggaatgagctgggccagcctgacttgcagcag
caagtgaatggcggggctctggcagtccacaccatcctgccccaggacacccaggtcctg
gccacctccctgccctctgccctcactcagcccatgaccaccacccagttcctgactcca
ccctcccagcacagctactcctcccccttggacaacacccccagccaccagctccaggtg
ccagaccacccgttcttgacaccttccccggagtcgccggaccaatggtcgagctcatct
ccacactccaacctgtcagattggtccgagggcatctcaagcccgcccaccagcatgcag
tcgcagatggggcacatcccagaggcgttcaaatag
DBGET
integrated database retrieval system
