Podarcis raffonei (Aeolian wall lizard): 128407108
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Entry
128407108 CDS
T09310
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128407108 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128407108 (SMARCD1)
03036 Chromosome and associated proteins [BR:
praf03036
]
128407108 (SMARCD1)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128407108 (SMARCD1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128407108 (SMARCD1)
PBAF complex
128407108 (SMARCD1)
GBAF(ncBAF) complex
128407108 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
128407108
NCBI-ProteinID:
XP_053231058
LinkDB
All DBs
Position
2:16286679..16300296
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AA seq
512 aa
AA seq
DB search
MAARAGFQAVAPSGGGGGAGPGAGALGPGAAGPPVRMGPAPGQGMYRSPLPGAAYPRPGM
LPGSRMNPQGPAMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQVQQQSVQNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKAMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggcttccaggcggtggctccgagcggcggcggcggcggggccggc
cccggggcgggagcgctgggcccaggggctgccgggcctcctgtgcggatgggcccggcc
ccggggcaaggaatgtaccgctctcctctgcccggcgctgcatacccgcgccctggcatg
ctgcctggcagccgcatgaaccctcagggacctgccatgggacctccagggtatggcggg
agcccttcagtccgaccggggatggctcagtcgggaatggaccagtctcgcaaaaggcca
gcccctcagcagatccagcaagttcagcaacagtccgttcagaaccgtaaccacaatgcc
aagaaaaagaagatggcggataagattctacctcagcggatccgggagctagtgccagag
tctcaggcgtacatggatttgttggcatttgagaggaagctggaccagaccatcatgagg
aagcggttggatatccaggaggccttgaagcggcccattaagcaaaagcggaagctgcgc
atctttatctctaacaccttcaacccagccaagtctgatgcagaggatggagaaggcacc
gtggcctcctgggagctccgagtggaaggacgtctgctagaagattctgctctctcaaag
tatgatgctaccaaacagaagaggaagttctcatccttctttaagtctctggtgattgag
ctggacaaggacctctatggccctgataatcacctggtggagtggcataggactgctacc
acccaggaaactgacggtttccaggtgaaaagacctggtgatgtgaatgtgcgttgtact
gtcctcttgatgctggattaccagcctcctcagttcaaactggacccacgtttggctcgc
ctcttgggcatccacacccagacccgcccagtgattatccaggccctgtggcaatacatc
aagactcacaagctacaggaccctcacgaacgggagtacgtcatttgtgacaagtacctc
cagcagatatttgaatctcagcgaatgaagttctcagagatccctcagcggttgcatgct
ttgcttatgcctccagaaccgatcatcatcaaccatgtcatcagcgtcgatccaaatgat
cagaagaaaactgcttgctatgacattgatgtggaagtggatgacactttgaaaacccaa
atgaattctttcctgctctccacagccagtcagcaggagatagctgcactggataacaag
atccacgagaccatagaaacaatcaaccagctgaagacccagcgggaattcatgctgagc
tttgccagagacccccagggcttcatcaacgactggctgcagtcccagtgccgggacctg
aaggctatgactgatgttgtcgggaacccagaagaggagcgccgagctgagttttacttc
cagccatgggctcaggaggccgtgtgcagatacttctactctaaggttcagcagagacgg
caggagctggagcaggccctgggaatccgcaacacatag
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