Podarcis raffonei (Aeolian wall lizard): 128407144
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Entry
128407144 CDS
T09310
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128407144 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128407144 (TRIM25)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128407144 (TRIM25)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128407144 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
zf-B_box
Tsp45I
TRASH_HVO_1752_C
Motif
Other DBs
NCBI-GeneID:
128407144
NCBI-ProteinID:
XP_053231139
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All DBs
Position
2:complement(20232423..20248614)
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AA seq
644 aa
AA seq
DB search
MAQLLRAPSAPSLVGLEEELTCSICLCVFESPVTTPCGHNFCLPCLEMTWSGLLRNFCCP
QCRSSFDSRPELKKNTVLCRVVEQFQSAQGEPADKKKGLGDATTKTTTTTSSSTRSSVAC
DSCLEKVADKTCLTCMASFCPEHLRPHLESPAFKGHQLVPPVKDLQRRKCQTHQKLLEFY
CKEHNSCICCFCLVTHKACATVPLQEAKDEKESQLKQRLTELYALNEKALQSLDQVRVQQ
KQTSDTANRKLDLLKAEFLEIIALIEEEEKEAVKKVLAEEKRVQDKYEYVYKVLGKKKTE
IQGARDQIEVTLTEDDDITFLKKAAKLRQLPIKDVFIPKLELDQNLIHTVYQKAFGLKEN
VKQFLAQPQEKKKEGAAQWKPKPFVQPGGKIAAPSAPKRDDPPSTSSQEKKTEEDAAAAA
ADTKQRRRPAKRSQSPNQRARSSSRPQAGIPSITLESFLSKSREELLEFATKFTLDFNTA
HKKVLLSERNTKISVSETPQNYAHHPQRFTYCSQVVAFQCFKRGIHYWEVELEHNTFCGV
GVCYGSMARQGAESRLGRNGSSWCIEWFNSRISAWHNDVEKCLPNTKLKKIGVLLNYDGG
FVIFFGVGEKLILLYKFRAQFTEALYPAFWVFSSGTTISLCQLK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctcagctgctgcgcgcgccctcggccccttccctggtgggcttggaagaggagctg
acctgctccatctgcctgtgcgtcttcgagagccccgtgaccaccccgtgcggccacaac
ttctgcctgccttgcctggagatgacctggtcgggcttgctgaggaacttctgctgccct
cagtgcaggagctccttcgacagtcgccccgagctgaagaaaaacacggtcctgtgcagg
gtggtggagcagttccagagcgcccaaggcgagcccgccgacaagaagaaaggccttgga
gatgccaccaccaaaaccaccaccaccaccagcagcagcacccgctcttcggtggcctgt
gacagttgcctggagaaggtggccgacaagacctgcctcacctgcatggcctccttctgc
ccggagcacctgcggccgcacctggagagccccgccttcaagggccaccagctggtgccg
ccggtgaaggacctccagcgccggaagtgccaaacccaccagaagctcctggagttctac
tgcaaggagcacaacagctgcatctgctgtttttgcctggtcacgcacaaggcgtgcgcc
accgtccccttgcaagaggccaaggacgagaaggagtcccaactgaagcagagactaacg
gaactctatgctctgaacgagaaagctttgcagtccctggaccaagtgcgagtgcagcag
aagcaaaccagtgatacagctaatcggaagttggacctgctgaaggcagaattcctggaa
attattgctttaattgaagaggaagaaaaagaagctgtgaagaaagtcctagcggaggag
aaaagagtccaagataaatacgaatatgtctataaagtgctgggtaagaagaaaaccgaa
atccagggagcgagagaccagattgaagtgaccttgacagaggatgacgacatcacattc
ttaaagaaggcagcaaaactccggcagttacctatcaaagatgtcttcatacctaaacta
gaattggatcaaaacttaatacacaccgtttatcaaaaagcctttggcctcaaagaaaac
gtgaaacagttcttggctcaaccccaggagaagaaaaaagaaggagccgcacagtggaaa
ccgaagccttttgtgcagccaggggggaaaattgctgcacccagtgcaccaaagagagac
gaccccccatcaacatcttcacaggagaagaagacagaagaggatgctgctgctgctgct
gcagacactaagcagagaaggcgacctgctaaacgatcacaaagtcccaaccagagagca
cgaagttctagcaggcctcaagcagggattccgtcgataactctggaaagctttttaagt
aaatcccgagaagagcttttggaatttgcgacaaaattcactctggatttcaacaccgcc
cacaagaaagtgctgctctctgagaggaacaccaagatatccgtgtcggaaactcctcag
aattacgcccaccaccctcagcgcttcacctactgctcccaggtggtggccttccagtgt
ttcaagcggggcatccattactgggaagtggagctggagcacaacaccttctgcggggtc
ggcgtctgctatgggagcatggcaaggcagggggcggagagccgcctggggcgtaacggc
agctcctggtgcatcgagtggttcaactccaggatctcggcctggcacaacgacgtcgag
aaatgcctgcccaacaccaagttgaagaagattggcgtcttgctgaattacgacggcggc
ttcgtcattttcttcggcgtcggcgagaaactcatcctgctctacaaattccgggcgcag
ttcacagaagcgctctatccagcgttctgggtgttctccagcgggaccactatctcgctg
tgccagctgaagtga
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