Podarcis raffonei (Aeolian wall lizard): 128407163
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Entry
128407163 CDS
T09310
Symbol
RHOT1
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128407163 (RHOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
praf03029
]
128407163 (RHOT1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
praf04031
]
128407163 (RHOT1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
128407163 (RHOT1)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
128407163 (RHOT1)
GTP-binding proteins [BR:
praf04031
]
Small (monomeric) G-proteins
Rho Family
Miro
128407163 (RHOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
EF-hand_7
EF-hand_6
EF-hand_1
RsgA_GTPase
Roc
Rad4
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
128407163
NCBI-ProteinID:
XP_053231170
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All DBs
Position
2:21027456..21083289
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AA seq
638 aa
AA seq
DB search
MSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSESEQSDEQLHNEISQANVICIV
YAVNNKNSIEKVTSRWIPLINERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEI
ETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFRISDQDND
GTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKNLSDGVADNGLTLKGFLFLHTLFIQR
GRHETTWTVLRRFGYDDDLELTPEYLFPLLKIPPDCTTELNHHAYLFLQSIFDKHDLDRD
CALSPDELKDLFKIFPYMPWGPDVNSTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYL
GYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNLIGLKGSGKSGVLQALLGR
NLMRQKHIRPEHKSYYAINTVYVYGQEKYLLLHNVCESDFLCDSEIMCDAVCLVYDVSNP
KSFEYCARIFKQHFMDSRIPCLVIAAKSDLHEVRQEYSISPAEFCKKHKMPPPQAFSCNT
VDAPSKDIFVKLTTMAMYPHARLRCMCTCNRCTFCICQNLLNSDLLQSVKNKLFTAVLNR
HVTQADLKSSTFWLRASFGATVFAVLGFAMYRALLKQR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgtcagtgaagaatttcccgaagaggttcctccacgagcagaagaaatcacc
attccagctgatgttaccccagagagagtgccaacccatatagtggattattcagaatct
gaacaaagtgacgaacagctccataatgaaatatcgcaagcgaatgtaatctgcatagta
tatgcagttaacaacaagaattcaattgaaaaggtaacaagtcgatggattcctctcatt
aatgaaagaacagacaaagacagcaggctgcctcttatactagttgggaacaaatcagat
ctggttgaatacagtagtatggagacgatccttcccattatgaaccaatatacagagata
gaaacttgcgtagagtgctcagccaagaacttgaagaacatatccgaactattttattat
gcgcagaaagctgttctacatcctacaggacccctctattgtccagaggaaaaagagatg
aagcctgcctgtataaaagcactaactcggatcttcaggatttccgatcaggataacgat
ggcacccttaatgatgcagaactcaacttctttcagcgaatttgttttaatacaccgttg
gcacctcaagcactggaagacgtaaagaatgtagtccggaaaaatctaagcgatggagtt
gcagataatggattaacattaaagggttttctttttctacacacactatttattcagcga
gggagacatgaaacaacctggacagtattgcggcgttttggatatgatgatgacctcgag
ctgacaccagagtatttatttcctttattaaaaatacctccggactgcacaacagagttg
aatcaccatgcctatttgttcctccaaagcatttttgataagcatgatttggaccgagat
tgtgctttgtctcctgatgaactcaaggatttgttcaaaatcttcccttatatgccgtgg
ggaccagatgtcaacagcactgtttgtacaaacgaaaggggatggataacgtatcaggga
tttctctctcagtggacactaactacgtatttggatgtacagcgctgcctggaatatttg
ggctacttaggatattcaatattgactgaacaggaatcccaggcatcagcaattacagta
actagagataaaaagattgacctgcagaaaaaacagactcagaggaacgtgttcaggtgc
aatctaattgggttgaaaggctctggaaaaagtggagtcctccaggcactgcttggaaga
aacctaatgagacagaagcatatacgtccagagcacaaatcttattatgcaattaataca
gtctatgtgtatggacaggaaaaatacttactgttgcataacgtttgtgaatctgacttc
ttatgtgattctgaaatcatgtgtgatgctgtatgcctagtttatgatgtcagcaacccc
aaatcctttgaatactgtgccaggatttttaagcaacacttcatggacagcaggatacct
tgcttagtgatagctgccaagtcagaccttcatgaagttagacaagagtacagcatttcc
ccggccgaattctgcaaaaaacacaaaatgcctccaccacaagccttttcttgtaacacg
gttgatgcaccgagtaaggacatctttgttaagttgacaacgatggccatgtatccccat
gcccgattacgctgtatgtgcacctgcaacaggtgtacattttgcatctgtcagaacctc
ctcaactcagacttgctgcaatctgtaaagaacaaactcttcaccgcagttcttaacagg
catgtgacgcaagcagacctcaagagctccaccttttggcttcgagcgagttttggtgct
acagtctttgccgttttgggctttgccatgtacagagcattactaaagcagcgatga
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