Podarcis raffonei (Aeolian wall lizard): 128407256
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Entry
128407256 CDS
T09310
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04136
Autophagy - other
praf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128407256 (WIPI1)
04136 Autophagy - other
128407256 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128407256 (WIPI1)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128407256 (WIPI1)
Membrane trafficking [BR:
praf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128407256 (WIPI1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128407256 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
EIF3I
Beta-prop_Vps41
Beta-prop_RSE1_2nd
DUF5711
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
128407256
NCBI-ProteinID:
XP_053231363
LinkDB
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Position
2:complement(25087368..25138085)
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AA seq
441 aa
AA seq
DB search
MEAAGGEGEPEALSCFSYNQDCTSLAIGTRTGYRLFSLSSVEQLDQVHESNEIPDVYIVE
RLFSSSLVVVVSRTKPRQMNVYHFKKGTEICNYSYSSNILSVRLNRQRLIVCLEESIYIH
NIKDMKLLKTILDTPPNTTGLCALSINHSNSYLAYPGSTTVGEIVLYDGNNLRDVCSISA
HDGPLAALAFNSTGSKLASASEKGTVIRVFSIPEGQKVYEFRRGMKRYVNISSLVFSMDS
QFLCASSNTETVHIFKLEHLTDSRPEEPPSWSGYMGKMFMAATNYLPSQVSGMMSQDRAF
ATVRLNFSGQRNICVLSTIQKLPRLLVTTSDGHLYLYNLDPQDGGECVLIKKHSLLDLGK
AEENKENDLRPPVPQTYAATVARQSSVPSPSMVPGYSEDGGALRGEVIPEHEFATGPVCL
DDENEFPPINLCRGSQTNKRS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccggcggagaaggggagccggaggcgctcagctgcttctcctacaaccag
gactgcacttccctggctattggaaccagaactgggtacaggcttttttccttgagttct
gtggagcagctggatcaggtccatgaaagcaatgaaatcccggatgtttacatcgtagag
cgcctcttctctagcagcctggtggtggtggtgagtcgcacaaagcctcggcagatgaac
gtctaccatttcaagaaagggaccgaaatctgtaactacagttactctagcaatatcctc
tctgtccggctcaatcggcagagactaattgtttgcttggaggaatctatttatatccat
aacattaaggacatgaagcttctgaaaacgatcttggacacccctccaaacacaacaggt
ttgtgtgcactttctattaaccattccaattcctacttggcataccccggcagcacgacc
gtcggcgagattgtgctgtacgacggaaataatttgagggacgtctgttcaatttctgcc
cacgatgggcccctcgctgccctggccttcaactccacagggtcaaaactagcaagtgct
tctgaaaaggggaccgtcattcgggtgttttccatccctgaggggcaaaaggtctatgaa
ttcagaagaggaatgaagaggtacgtgaacatcagctccctggtgttcagtatggactcg
caattcttgtgtgcgtcaagcaacaccgagaccgttcacatctttaagctggaacatctc
acagacagccggccggaagaacccccgtcctggagcggctacatgggcaagatgttcatg
gccgccaccaactacctcccttctcaagtgtcaggcatgatgagccaggaccgggccttt
gccaccgtgcgcttgaacttctctggacaaaggaacatctgtgtgctctccacaatccag
aagttgcctcggctcttggttacgacgtctgacggacacctttacctctacaacctggac
cctcaagatggaggagagtgtgttctaatcaagaaacacagcttgcttgacctgggaaag
gcagaagagaacaaagaaaacgatctccgccccccagtacctcagacttatgctgcaacg
gtagcccggcagagttcggtgccttcaccttcgatggtgccaggttactcagaagatgga
ggagcccttcgaggagaggttataccggagcacgaattcgccactgggccagtgtgtctg
gatgatgaaaatgagtttccacctataaacttgtgccgtggaagccagacgaacaagagg
tcatga
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