Podarcis raffonei (Aeolian wall lizard): 128407456
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Entry
128407456 CDS
T09310
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128407456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128407456
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128407456
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128407456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
SPRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_3
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
PRY
zf-ANAPC11
zf-RING_6
BNR_3
zf-Nse
FloA
U-box
PDCD7
Motif
Other DBs
NCBI-GeneID:
128407456
NCBI-ProteinID:
XP_053231808
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Position
2:34955480..34973574
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AA seq
559 aa
AA seq
DB search
MKKASLLFLEDNIVCPICLEVFRDPVTTACGHNFCMDCLQDYWDHQALVGDCPYCPQCRE
PFSSRPQLRKNTTLGEIATRFAREEAQGSRKLAGQREVLCDFCSPRKMKAVKSCLQCMAS
LCENHIRSHYEDNAFRNHQLIKPLNDLKANMCLKHHRLLELFCRIEGKFICHICVREEHK
NHDAITLKDDRTKKEVEVRRVQANVKNQVLMLAADSQQHRGRVNYLAKVVKTARDEVNRA
FAEAMKELKRLQNKVMDFIDEEERSALVGMGNSIQHSQEQLIDLQKQNYWLTGLMEDPSD
HQFLQDFPKIRVMSGCTEALIGLKCEEPTSFVALKQTLSDLKSQVSMFGLCFINKALQKG
ITMVPYEVIPAPTDRKSLRKYYCLLNFDASTANEELFLFKETHSVLNMGILLENYSKPSQ
GFNHWPQLLCTRSLCEGCHYWEAEISNAWLCLGVTYSYKHRTEKACMLYLLGRNSNSWCL
EWDSLKYSVWHNNIQTVVHGSYYKTIGVLLNYAAGSLTFYGITNTMNLIYRFLTIFTEPL
YPAAMVSSGASITLKQHPD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctagcttgcttttcctcgaggacaacattgtgtgtccgatatgcctcgag
gtgttcagagaccccgtcaccacagcctgcggacacaacttctgcatggactgtttgcag
gattactgggaccaccaagccctggtcggggattgcccctactgccctcagtgtcgtgag
cctttcagttcgaggcctcaactgcgcaaaaacacaaccctgggagaaattgccacgagg
ttcgcaagggaagaagcccaagggtcaaggaagctggcaggtcagagggaggttttgtgt
gacttctgctcccccaggaagatgaaggctgtcaagtcctgcctgcaatgcatggcttcc
ttgtgcgaaaaccacatccgttcccactatgaagacaacgccttcaggaaccatcagctg
ataaagcctctcaatgacctgaaggctaatatgtgcttgaaacatcacagactcctggag
ctgttctgcagaatcgaagggaaattcatctgccacatctgtgttcgggaagagcacaag
aatcatgacgccatcactctgaaggacgacaggaccaagaaagaagtcgaagtcaggaga
gtacaagccaatgtgaaaaaccaagtcttgatgttggcagcggacagtcagcaacacagg
ggcagagtgaactaccttgcgaaagtagtgaagacggcccgagacgaagtgaatagggcc
tttgccgaggcgatgaaagagctcaagcgactgcagaacaaggtgatggactttatagat
gaagaagaaagatcggccttagttggaatggggaattccattcagcacagtcaagagcag
ctcattgatctccagaagcagaattactggctgacaggtctcatggaagacccaagtgac
catcagtttctgcaggacttcccaaaaataagagtaatgtcgggttgcacagaagctttg
attggactgaagtgtgaggagcccaccagtttcgtagcacttaaacagaccctgagtgac
ttgaaatcccaagtgtccatgttcggactctgcttcatcaacaaagcccttcaaaaaggg
atcacaatggtgccttatgaagtgataccagctcccacggatcggaagagtctcagaaag
tattactgtctgctaaattttgatgccagcactgccaacgaagaactcttcctgtttaag
gagacccactcggtgctgaacatgggaatcttgttggagaactactcaaaacccagccaa
ggattcaaccactggccacagctcttgtgcacccgcagcctatgtgagggctgccattac
tgggaggctgagatttcaaacgcatggctgtgtttgggagtcacctacagttacaaacat
agaactgagaaagcttgcatgttgtacctgcttggcaggaatagcaattcgtggtgcttg
gagtgggactcactgaagtactctgtctggcacaacaatattcagaccgtggtacatggc
agctactataagacaattggagtcttactaaactatgctgctggctccctgactttctat
ggcatcaccaacaccatgaacctcatctaccgtttcctcaccatattcaccgaacctctt
tacccggctgctatggtaagcagcggggcctctattactttgaaacagcacccagactag
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