Podarcis raffonei (Aeolian wall lizard): 128407665
Help
Entry
128407665 CDS
T09310
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04137
Mitophagy - animal
praf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128407665
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128407665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128407665
03009 Ribosome biogenesis [BR:
praf03009
]
128407665
04131 Membrane trafficking [BR:
praf04131
]
128407665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128407665
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128407665
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128407665
Membrane trafficking [BR:
praf04131
]
SNARE
SNARE associated proteins
Others
128407665
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128407665
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128407665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_28
NPHP3_N
AAA_14
Vps4_C
nSTAND3
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_17
AAA_18
ATPase
IstB_IS21
AAA_7
ABC_tran
AAA_24
AAA_lid_PRS2_C
DUF815
ResIII
TsaE
Sigma54_activat
Viral_helicase1
NACHT
NB-ARC
SLFN-g3_helicase
Rad17
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
128407665
NCBI-ProteinID:
XP_053232280
LinkDB
All DBs
Position
2:complement(43744026..43765627)
Genome browser
AA seq
807 aa
AA seq
DB search
MPASGGDPKGEDYSTAILRQKHRPNRLIVDEAANEDNSIVSLSQAKMEELHLFRGDTVLL
KGKKRRETVCIVLTDDSCQNEKIRMNRVTRNNLRVRLGDVVSVQACPDVKYGKRIHVLPI
DDTIAGLTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPSPHCIVAPD
TIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLADDVDLERVANETHGHVGADLAALCSEAA
LQAIRKKMSVIDLEDDTIDADILNSMAVTMDDFQWALGQSNPSALRETVVEVPQVCWEDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRIAILQA
NLRKSPIAKDVDLNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKAERERQRHKCA
AMDDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGKQS
TSGEGNSGSSSGQGSLFQEEGDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctccggaggggaccccaagggagaggattactccacagccatcctgcgccag
aaacatcgtcccaaccgcctcattgtagatgaagcggccaatgaagacaacagcattgtc
agcctgtctcaggccaagatggaagagctgcacttgttccggggagacacagtgctgctg
aaggggaagaagcgccgggagacagtctgcatcgtcctcacggatgactcctgccagaac
gagaagatccgcatgaaccgcgtcacccgcaacaacctccgtgtgcgccttggagacgta
gtcagtgtgcaggcttgtccggatgtgaagtacggaaagcggatccacgtcctgcccatt
gacgacaccattgcaggcttgactgggaacctctttgaagtttacctcaaaccctatttc
ctcgaggcatatcgacctgtgcacaaaggtgacattttccttgtgcgaggcgggatgagg
gctgtggagttcaaggtggttgaggttgaccccagcccccactgcatcgttgctcctgac
accatcatccactgcgagggggagcccatcaagcgagaggatgaagaggaaagcctcaat
gatgtcggctacgatgacattgggggctgccgtaaacagctggctcagatcaaggagatg
gtggagctgcccctgagacacccagcgctcttcaaagctattggtgtgaagcctccacga
gggattcttctttatggtccccctggcactgggaaaacacttgttgcccgtgctgttgca
aatgaaaccggagccttcttcttccttatcaatggcccagagatcatgagcaaactggct
ggggaatcagagagcaacttgcgcaaagcctttgaagaggcagagaagaatgctccagcc
attatctttattgatgagctggatgccattgcccctaagagggagaagacacatggagaa
gtggaacgccgcattgtgtcccagctgctcacactcatggatggcctgaagcagcgctca
catgtgatagtcatggcagctacgaatcggcccaacagcatcgatcctgcactgcgccgt
tttgggcgctttgaccgagaaattgacattgggatcccagattctgtgggaaggctggaa
atcctgcagatacacaccaagaacatgaaactggccgacgatgtggacctggagagggtg
gccaatgaaacgcatgggcacgtgggtgctgacctggcagctctgtgttctgaggcagcg
ctccaggccatccgcaagaagatgagcgtcattgacctggaggacgacacgattgatgct
gacatcctcaattccatggctgtcactatggatgacttccagtgggcccttggacagagc
aacccgtcagcacttcgcgagactgtagtggaggttccacaggtctgctgggaagatatt
ggaggcctgcaggaagtcaagcgtgagctacaagagctggtgcagttcccagtggagtat
cccgacaagttcctgaaatttggaatgacgccatcacgaggtgtgcttttctatggacct
cctggctgtggcaagaccctcctggccaaggccattgcgaacgagtgccaggccaatttt
atctccatcaaggggcctgagctgctcaccatgtggtttggagaaagtgaggccaacgtc
cgtgacgtttttgacaaggccaggcaggctgctccctgcatcctcttcttcgatgagctg
gactccattgccaagtcccgtggtggtggtgcaggagacggtggaggtgcagctgaccgt
gtcatcaaccagatccttacagagatggatggcatgaccaacaagaagacagttttcatc
ataggtgccaccaacagaccagacatcattgacccagccatccttcgtccaggacgcctg
gatcagctcatctacatccccttgcccgatgacaagtctcgcatagctattctccaagcc
aacttgcgaaagtcacctatcgccaaggatgtggatttgaattacttggccaagatcaca
catggcttctcaggtgctgacctcactgaaatatgccagcgtgcctgcaaactggccatc
cgtgaggccatcgagatggagatcaaggcagaacgggagcgtcagcgtcataaatgtgcc
gccatggatgacgattatgaccctgtgccagagatccgacgtgatcactttgaggaagca
atgcgctttgcacgccgctctgtcagtgataatgacatacgcaagtatgagatgtttgcc
caaacgttacagcaaagccgtggctttggcaacttcaggtttccatctggaaagcagagc
accagtggagagggaaacagtggaagcagcagtggccaaggaagcctcttccaagaggag
ggcgatgatgatctttacaactga
DBGET
integrated database retrieval system
