Podarcis raffonei (Aeolian wall lizard): 128407728
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Entry
128407728 CDS
T09310
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04080
Neuroactive ligand-receptor interaction
praf04082
Neuroactive ligand signaling
praf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128407728 (GABRA6)
04082 Neuroactive ligand signaling
128407728 (GABRA6)
04519 Cadherin signaling
128407728 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128407728 (GABRA6)
Ion channels [BR:
praf04040
]
Ligand-gated channels
GABA-A
128407728 (GABRA6)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cyclin_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
128407728
NCBI-ProteinID:
XP_053232439
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Position
2:45841465..45872250
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AA seq
473 aa
AA seq
DB search
MAWWLPWICFTACLHKVLADDPAADEGDLYSENISRILDKLLDGYDNRLRPGFGGRGSPG
AVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQMWIDERLKFGGPTEILRLNNLMVSKIWT
PDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLK
FGSYAYPKSEIIYTWKKGPLYSVEIPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVY
FHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHS
LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQRAMKKAARAAALAAALSAAT
VPAEDEIVSHSDSNCNLKKRVNSMTSQTDHSLETSMLSNSASQSQQTSVTTPPPPPPPPL
IGGTSKIDQYSRILFPVAFAGFNLVYWVVYLSKDTMEFFEPTAMHLRNDHQTN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtggcttccttggatttgcttcactgcgtgcctccacaaggtgctggcggac
gaccccgctgccgacgagggcgacctctactcggagaacatctcccggatcctggacaag
ctcctggacggctacgacaaccggctgcgacccgggttcggcggcaggggcagcccagga
gccgtgacggaagtcaagacagacatctacgtgaccagctttggtcctgtgtcagatgtg
gaaatggaatataccatggatgttttctttcggcaaatgtggatcgatgagaggttgaaa
tttggtgggcccactgaaattctgaggttgaacaatttaatggtcagtaaaatatggaca
ccagacaccttttttagaaacgggaagaagtcaattgctcataatatgacaactccaaac
aaacttttcaggataatgcagaacggcaccatcctctataccatgagacttaccattaat
gctgactgtcctatgcgtctggtaaacttccctatggatggacatgcttgtcccctgaag
tttgggagctacgcctatcctaaaagtgagattatttacacctggaaaaaaggaccattg
tattcggtggaaattccacaagaatcttccagtcttctccagtatgatcttatagggcaa
acagtctctagtgaaacaataaaatccaatacaggtgaatacgtaataatgactgtttat
ttccacttacaaaggaagatgggctacttcatgattcagatatatactccctgcatcatg
acagtcatcctctctcaggtgtctttctggattaataaggagtctgttccagctaggaca
gtttttgggatcaccactgtcctcacaatgactacgttgagcatcagcgcccgccactct
ttgcccaaggtgtcttatgctactgccatggattggttcattgctgtgtgctttgccttt
gtcttctctgcacttatcgagtttgcagctgtcaactactttaccaatcttcagactcag
agagcaatgaagaaggcagccagggcagccgcactagcagccgcgctctcagcagctacc
gtaccggcggaggacgagatagtctcgcactctgactccaactgcaacttgaagaagcga
gtcaactctatgacgtctcaaacagatcactcccttgaaacaagcatgttgtccaatagt
gcatctcaaagtcaacagacatctgttactacgccaccgccaccaccgccaccaccacta
attggaggcacgagtaaaatagatcagtactccaggatcctctttccagtggcatttgca
ggattcaacctggtatactgggtggtttacctttcaaaggacactatggaattttttgaa
cctactgcaatgcatcttcgaaatgaccatcaaaccaactga
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