Podarcis raffonei (Aeolian wall lizard): 128407741
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Entry
128407741 CDS
T09310
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128407741 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128407741 (CPSF2)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128407741 (CPSF2)
U7-dependent histone pre-mRNA processing factors
128407741 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
128407741
NCBI-ProteinID:
XP_053232479
LinkDB
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Position
1:complement(22651840..22671140)
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDHPSEKVTDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DDSDAEEDVDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAESCRAFGGKDIKVYMPKLHETIDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWVDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVDPPSSDSSAVAQQKAIKSLFGDDDKEICEESEIIPTLEPLPPNEVLGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRGLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattatcaagctaaccaccctttcaggggtgcaggaagaatctgctctgtgc
tatttacttcaagtcgatgaatttcgctttctgttggattgtggctgggatgagaatttt
tctatggacatcattgattccctacggaaacatgttcaccaggtggatgcagtacttctt
tcacatcccgatcctttacacttgggcgcactcccatatgcagtcggaaagatggggttg
aattgtgctatttatgcaactattcctgtctacaaaatgggccaaatgttcatgtacgat
ctctaccagtcacgtcacaatacagaggacttcactttgttcaccttggatgatgtggat
gcggcttttgataaaatacaacaactaaaattttctcagattgtcaatttgaaagggaaa
ggtcatggcttgtccatcacgccattaccagcaggccacatgataggaggaacaatttgg
aagatagttaaagacggggaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccatttgaatggatgttccctggaaatgctaagcaggccttccttgcttatcact
gattcctttaatgctacttatgtacagccacgacggaaacaaagagacgaacagctacta
acaaatgtcttggaaacactgagaggtgatggaaatgtcctaatagctgtggacactgca
ggcagagttttggaacttgcccaactgcttgatcaaatatggaggacaaaagatgccggt
ttaggagtctactctttagcacttttaaataatgtcagctacaatgttgtagaattctca
aaatctcaggttgaatggatgagcgacaaactgatgagatgctttgaagataagaggaac
aatccttttcagtttcgtcatctctctctctgtcatgggcttgctgatttggcgcgggtt
cctagtcccaaagttgtccttgccagccaaccagatctggaatgtgggttttcaagagat
ctctttatacaatggtgccaggatcctaaaaactctataattttaacatatagaactact
cctggcacactagcacgtttcctaatagatcatccctctgaaaaagttacagatatagag
ctgaggaaaagagtgaaactggaagggaaggaacttgaggaatacctggagaaagaaaaa
ctgaagaaagaggcggccaaaaagttagaacagtccaaagaagcagatattgattccagc
gatgacagtgatgccgaagaggacgttgatcaaccatctgttcataaaactaagcatgac
cttatgatgaaaggtgaaggcaaccgcaaaggaagcttcttcaaacaggccaaaaagtcc
taccctatgtttccagctccagaagagagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcctcgttccagaacttcaggcaacagaagaagaaaagaacaaatta
gaatctggacttacaaatggagaggagcctatggaccaggatttatcagatgttccgacc
aaatgcatttcagcaacagaatcaatggaaataaaagctcgtgttacatacatagactat
gaagggcggtcagatggggactccattaagaaaataattaatcagatgaagccgcgacaa
ttgatcattgtccatgggccccctgaggccagccaggatcttgcagaatcctgtagagct
tttggtggaaaggacattaaagtatacatgcctaaattgcatgaaaccatagatgcaacc
agtgagactcacatataccaggtcaggttaaaggactcactggtcagttcccttcagttt
tgtaaagccaaagacgctgaactggcatgggtagatggagtcctggacatgcgggtatca
aaagtggacacgggggtgattttggaagaaggggaactgagagatgatggagaagataca
gagatgcaagtggacccaccctcgtcggattctagtgctgttgcacagcagaaggccatc
aagagtctttttggagatgatgacaaagaaatatgcgaggaaagtgagatcattcctact
ttggaacccctgccaccgaatgaggttcttggacatcagtctgtcttcatgaatgagcca
agactttctgattttaagcaagttctcttgcgagaaggaattcaagctgagtttgtagga
ggggttctcgtatgtaacaacttggtggctgttcgcaggactgaaactggacgcattgga
ttggagggctgtctctgtgaagatttctataaaattagaggccttttatatgaacaatat
gccattgtctaa
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