Podarcis raffonei (Aeolian wall lizard): 128407781
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Entry
128407781 CDS
T09310
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128407781 (SH3TC2)
Membrane trafficking [BR:
praf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128407781 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
TPR_2
TPR_8
TPR_1
SH3_1
TPR_7
SNAP
SH3_9
Motif
Other DBs
NCBI-GeneID:
128407781
NCBI-ProteinID:
XP_053232565
LinkDB
All DBs
Position
2:51597058..51643291
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AA seq
1338 aa
AA seq
DB search
MTLEIGKPRPSSDLSSPHVGEEASSCSSDQPVCLASWSSLQQYTAEPPERWFKEGKMASG
NPRELDPGSQSAQIGEGTLETESVSLAVGEGFLNEIALSFSVKSRSGQGPIPQLQETARK
KLWALENDDKDVCALFKELSARLVCIQAQDSRFLLSFRTIEEIWKFSTYLALGYVGCCLE
HLLFTPEYWLNCALVEDTEITVALDEDHMATMYLGLLLQEGNFFARVVVGVLTDEEGEDL
KLSKNELVHVKDIGHDTKWEGTSLLNDQRGLVPVTAMEPLPHPFYQWFLKNYPMSCGISK
QISGPGSLQIGQGRCTTTEDHRGRGWDELSFCKGDTIEVTGFLIPGLQWFIGKSTTSGAV
GFVQTRCVHPETCEPMQKNPVFFSEEEVASILQVPSNGNETHYSNLLGEWAQTDITSVYR
LDGFEPVAMYPRMPSDAVVQGLKDGWMFESWGKQASNSLPTPSGSEKSSPVGDSSPSTLE
HLLLPEPDDLDDPKFFVDLNAGHMEDSDVFDPILTFLNQDGYVPHFQSLYDLSFSFLSST
FYGFSSEEELVLYLETSRNWAKRGHLAWAHIRICFLLGRLCTKKAKFSQARVYFEEAMSA
IDRGFDDLPLLASLHTNLAAIYLKQKMKQKFLSVLGKGVALLACLPGHCFCSENELEVMM
YILREAIAMGNVALEARACLLVVRLFLQLGKYDEVLPFSERLQFLCSSVSSQDSSAPSLD
LMPLLTYLYEKKCLPHVALASARLSPPSPVKGAPTPIWRAGFILSNASKLLVIQDRRSRS
SVPALACLYLSCALAFSHENGAVPTERALCAVLSKMYLKHGMLQGAVHYSNRAVALGKVM
GEEEAFESSLSLGWVYALSSQPEKASEIMLRLLRSLRQTDSITQDGVVHNLLAIALKGEG
QVQKSAENYLRALNKAQETGNRRNQAIALSNFGCLAVSCQASHLAECYFLQAVRLYFELQ
GGDDAQLELVQILLWLAQCQVEMHKTDESKLFHELALAVALNTSNIMSQLQVTESICHFY
RKVQPNTGACIIYHEHQLFLAQQLQDKEMEGQLLQVLSQLYQSLQTTRYVKQALDYTKQS
LRIFIDLEETVKTAQAWLQAGRLYYQMQEDELVEMYLQAAIQTSLKSEELHLAMELYEEA
GDVFFNGIRNRQKAVDYYRGGAVPLARKLKVLQTELRVFNKLTELQLGLQNYEKALEFAT
LATRLSVDVGDHLQEVVAFHRLATVYYSLQMYEMAEDCYLRTLSLRSPLLQGAQEAMYYS
KVYCRLGDLTLHKLKDEQDAANYFLLALAAATELDDQAWECKIQSKLAQIYHASQSNKSP
RGWTTYRARWLSEGRCDV
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgaccctagaaattggcaagccaaggcctagcagtgacctctcttcccctcatgttggt
gaagaggcatcctcttgttcatctgatcaaccggtgtgcctggccagttggtccagtctg
caacagtacacagctgaacccccagaaagatggttcaaagaggggaagatggcatcaggt
aaccccagggaactggatccaggaagtcagtctgcacaaataggagagggcactctggaa
actgagtccgtgtcactggctgtaggggaagggttcctaaatgagattgccctctcattt
tctgtcaagagtcgctcgggacagggtcccattccccagctgcaggagacagccagaaag
aagctgtgggccttagaaaatgacgacaaagatgtctgtgctcttttcaaggagctgtca
gcccggctggtttgtatccaggcacaggacagtcgctttctactctccttcaggaccatt
gaagaaatctggaagttttcaacatacttagcactcggctatgtgggctgctgtttggag
catcttctcttcacccctgagtactggctgaactgtgctctggtggaggacaccgagata
actgttgctctagacgaggatcacatggccaccatgtacttaggtcttctgcttcaggaa
ggaaacttctttgccagggtcgtggttggtgtcctgacagatgaagaaggggaggatttg
aagctctccaaaaatgagcttgtccatgtgaaagacattgggcatgacaccaaatgggaa
gggacatctctgttgaatgaccaaaggggcctggtccctgtcacagccatggaaccattg
ccccatcctttttaccagtggttcctgaagaactatccaatgagctgtggtatctccaaa
caaatcagcggacctggctctttgcagattggccaagggaggtgcacaactacagaagat
cacagagggagaggatgggacgagctgagcttctgcaaaggggacaccatagaggtcact
ggctttctcattccaggcctccagtggtttatagggaaatccacaaccagcggtgcagta
ggctttgtccaaaccagatgtgtgcatcctgagacttgtgagccgatgcaaaagaatcca
gtattttttagcgaagaagaagtcgcctccattctgcaggttccatccaatggcaatgag
acgcattacagtaatcttctgggtgaatgggcacaaacagacatcacttctgtgtacagg
cttgatggctttgaacctgtggcaatgtacccaagaatgccatcagatgcagttgttcag
ggacttaaggatggctggatgtttgagagctgggggaagcaggctagcaatagcttgcct
actcctagtggttctgaaaagtccagtcctgttggtgactcttcaccttctaccctggaa
cacttacttctgccagaaccagatgaccttgatgaccccaagttctttgttgacctgaac
gctgggcacatggaggactctgacgtttttgaccctatattgacttttctcaaccaagat
ggctatgtgccccatttccaaagtctctatgacctctctttttccttcctcagttccacc
ttctatggcttctccagtgaggaagagctagtcctatacctagagacatccaggaactgg
gccaagagaggtcaccttgcttgggctcacatccggatatgctttctcttgggccgcctc
tgcaccaagaaggccaagttctctcaggctcgagtgtattttgaggaagccatgagtgct
attgacagaggttttgacgacctgcccctgcttgcctcgctgcacacaaacctcgctgcc
atttacctgaagcagaagatgaagcagaagttcttgtctgtgcttgggaaaggggtggcc
cttctggcctgcctgcctggacactgcttctgttctgagaatgagcttgaggtcatgatg
tacattctgagagaagccattgccatgggcaacgttgctttggaagctcgggcctgcctt
cttgtggtcaggctcttcttgcagctgggcaagtatgacgaagtcctgcctttctccgaa
cgcttgcagttcctgtgctctagtgtctctagccaggactccagtgcaccctctttggac
ctgatgcctctcctgacctacctctatgagaagaagtgcttgccgcatgttgccttggca
tctgccaggctttcccctcccagccctgtgaaaggggctccaacacccatttggagagct
ggattcatcctttcaaatgcttctaagctcctggtgatccaagacaggagaagcagaagc
agtgtccccgctttggcttgcctctacctgagctgtgccttggccttctcccacgaaaac
ggagctgtgcccacggagagagccctttgtgcagtgttatccaaaatgtacctcaagcat
ggcatgttacaaggagccgttcattattcgaacagggctgttgcccttggcaaggtgatg
ggtgaggaggaagcttttgagtcctccctttctttggggtgggtgtacgctttgagcagc
cagccagaaaaagcatcggagatcatgttgcgcctcctgcgttctctgcgacagacagac
agcatcacgcaagacggggttgtccacaaccttctggccattgcccttaaaggagaaggg
caggtgcagaagtcagcagagaactacctgagggccttaaacaaagcccaggagactggc
aacaggcggaaccaagccattgccttatccaactttgggtgcctggctgtctcttgccag
gcaagccacctagcggaatgctactttctccaggctgttaggttgtattttgaactacag
ggtggagatgatgcacagctggagctggtgcagattctgctgtggttggcccagtgccag
gtggagatgcataagacagatgagagcaaactgtttcatgaacttgccttggccgttgcc
ttgaacacaagcaacattatgagtcaacttcaggtcacggagtccatctgccatttctat
cgcaaagtgcagcccaacactggggcctgcatcatctaccatgagcaccaactcttccta
gctcagcagctccaggacaaagaaatggaagggcagcttctgcaggtcctcagccagctc
taccagagtctgcagacaaccagatatgtgaaacaggccctggattataccaaacagagt
ctgagaatcttcattgacctggaggaaacggtcaaaacagcgcaggcctggctgcaggct
ggaaggctttactatcaaatgcaagaggatgaacttgtggaaatgtatttgcaggcagcc
atacagacgtcactgaaatctgaagagctgcatttggccatggaactatatgaagaggct
ggtgatgtctttttcaatgggatccggaacagacaaaaggcagtggactattacagggga
ggagctgtccctttggctaggaagctgaaggtgctgcagactgagttgagagtgttcaac
aagctgacggagctgcagctcggactccagaattatgagaaggctttggaatttgctacc
ttggcaaccaggctcagtgtggatgtaggagatcacctgcaagaagtagttgcctttcac
cgcctggcgacagtgtactattctctgcaaatgtatgaaatggctgaggactgctacctg
aggacactctctctgcgctcaccattgttgcaaggtgctcaggaagctatgtattattcc
aaggtttactgtcgcctgggagatttgaccctgcacaaactaaaggatgaacaagatgca
gctaactacttcctcttggccttggctgctgccactgagcttgatgaccaggcttgggaa
tgcaagattcagtccaagctggcacaaatatatcatgcttcccagtccaataagagccca
agggggtggaccacatatcgggcccggtggctgagcgaaggaagatgtgatgtatga
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