Podarcis raffonei (Aeolian wall lizard): 128407856
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Entry
128407856 CDS
T09310
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128407856 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128407856 (IRF1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128407856 (IRF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
128407856
NCBI-ProteinID:
XP_053232736
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All DBs
Position
2:56808174..56821399
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AA seq
307 aa
AA seq
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MPQTRMRMRPWMELQINSNKIPGLQWINKDEKLFQIPWKHAAKHGWELEKDACLFRNWAI
HTGRYKPGDKEPDPKTWKANFRCAMNSLPDIEEVKDKSISKGSSAVRVYRMLEPSAKSPK
KEKKSKSLKIKNARKSVDDFKTEETVSATNSIQLPDDHSSYVLPNCQPEKMEVGSTLGDL
SSCNLNPADWGCSLEHQLPDSTNDLYTFQVSPITSSSDGTDEDEDKFASGNLYQELLSST
WQPTSVGGKGFLINETGMSSLFFDFSFQEQDAAIDTTNAEITLDMKTSLDFTFESIRPSL
PTIPCSM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaagaatgcgcatgaggccttggatggaattgcagattaattccaataaa
attcctgggctccaatggatcaataaggatgaaaagttgttccagatcccatggaaacac
gcggccaagcatggctgggagctggaaaaggatgcctgccttttcagaaactgggccatt
catactgggaggtacaaaccaggcgataaagaacctgaccctaaaacctggaaggcaaat
ttccgttgcgccatgaattcattgcctgatattgaagaggtgaaggacaaaagcatcagc
aaaggttccagtgctgtccgggtctacaggatgttggaaccctcagcaaagtcaccaaag
aaagagaagaaatcaaagtccctgaaaatcaagaatgcaagaaagtcagtggacgatttc
aagacagaagagacagtcagtgcaacaaacagcattcagctgccggatgaccacagtagc
tatgtgcttcccaactgccaaccagagaaaatggaagtggggagcacattaggagatctc
tcctcatgtaacttaaaccctgctgactggggatgttcgctggagcatcagctgccggac
agcacaaacgacttgtatacatttcaagtgtcgcccatcacatcctcctctgatggaacc
gatgaggatgaagataaatttgcatcgggtaacttgtatcaggagctactgtcatccact
tggcagccaaccagtgttggtgggaaaggtttcctgatcaatgagactggcatgtcaagt
ttattctttgacttcagctttcaggaacaagatgctgccattgatacaacaaatgcagaa
attacattggacatgaaaaccagcttggatttcacatttgagtccattagaccaagtttg
cccaccataccttgtagcatgtaa
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