Podarcis raffonei (Aeolian wall lizard): 128407966
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Entry
128407966 CDS
T09310
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128407966 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Pox_VLTF3
Motif
Other DBs
NCBI-GeneID:
128407966
NCBI-ProteinID:
XP_053233006
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Position
2:63750697..63825107
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AA seq
1265 aa
AA seq
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MLEATLRQPCLQPQSSCAGTSKAKQNPYSFKKPKPDLVDGYGCLEGLQGKERESSQRCLP
AGKNRPAEQEIKESARKSFLQESWKASGDMLPFKGDGSGLISGGECPTTRDSPRPALDLL
QPGFSKNGDPSQEWKVVKVKRVLISPVAEPRKANVSRSASLSEKELKEAKARSQRIAAQL
TTPPSSNSKGVLLFHRRKQRVNAFTLEAPKTTSLKQAGAERIPRATQKHQSSPRHGKEPH
LKQASIDIGASEGLSCAKNSELRGQKGSMEEYEKSLALEQTLDNTQGSQRHKIRSEEAVS
TIHATLSSEEIPAEDFEQIPLSVYLKETTGTASTNGMHELIANKFEKALVTEQVPVVDNM
EKILPIFDAVPVADRENNSTILEQAPCVLHTDRENNVLDKEPYLPNIDSKNNNNIPDKVL
YAPVLDQENNIFLDKPMSEPVIDRKENGEILIKEPDVPIIEDKDVSPAAEEEKPMLATDT
QPSETVTHTNKQYCEVRLTLSKPLPVKNRTARPFGTRLLAAAQAPAEKSPVAEFPPPPTY
AETFSSPPPVTRVRSPPAYSALYPTEEQKAPVPHEATYVDSRPGPLPGGEDRESPATETG
LLEESVARRATKKSMFTFVEKPKVAPNPDLLNLVQRADNRKKGRGQGGASSLEEEPFALG
AEASNFLPENRSIEGPAQAPADNAPEWSSCLRSPRIQPKPMIKSNQSLSEARGKGAELFA
RRQSRMQKYVIESPSHPDIGRSPSPTMSLPPSWKYASETHLSPVTFQAPPKSPARSPKAP
PLPLYNSNMSESEISKKELEISKQQPYQLQSSLFILSPAKDPVRSLPKGAPPPKPVVAEP
TYMRQASCPTSPLPPSPVFHPLAQFSQGRPYPAPFAPSPGTSLAPQNVQTSMEASQEPPF
EYSSRILSPRAKGVFQAPRPSYSTKNAGIEPQERKMSLPASPTWTPRLLRRPPSSLDGWV
SPAQTPEPEEGLIEAFRVASVMTPPPPPMSPSWSERSVSPFRQEADPKSSRQMQVLLARN
IINAAKRKSSSPKAVAIESFRPFTPPATPSGGSPKSVGNHSPSPLPSPRPTRVDGYRRVS
LPLSATPPHPSAPSNNSPRLLGSQSPTYKSPLQSPKAVRMNGNKYFTMPASTGASLCHAV
ASNNGLRTAGTHSAAQSPKPSIVESHRISTPPGSTTRKSSCPSPKNVGTCSPTIKSPLQS
PMVGVRSPLKRFTSLSPTNSDVSLDSEDSGIKSPSIRSFNICPRGWNGSLRLKRGSLPAE
APCTS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgctagaggcgaccttacggcaaccttgtctccaacctcaatccagctgtgctgggacc
agcaaagcaaagcaaaatccatacagttttaagaagcccaagcctgacttggttgatgga
tatggctgcttggaaggcctgcaaggaaaggagagagaaagcagtcaaagatgtctccca
gctgggaagaatcgcccagcagagcaagagataaaagagtcagcaagaaagagtttcttg
caggaatcttggaaagccagtggagatatgctaccgttcaagggagatggcagcgggctg
atatcagggggtgagtgccccacgacgagagactctccaaggccagctttggacttgctc
cagcctgggtttagcaaaaacggcgacccgagtcaagaatggaaagtggtgaaagtgaag
cgagtccttatttctcctgtggctgagcctaggaaagcaaatgtttcgagaagtgccagc
ctttctgagaaagagctgaaggaagcgaaagccaggagccagagaattgcagctcagctg
acaaccccaccaagctccaactccaaaggagtccttctgtttcaccggcgcaagcagcgg
gtgaatgcttttaccttagaggcccccaagacaacaagcctgaagcaagcaggggccgaa
cgcatccccagagctactcagaagcaccaaagcagcccaagacatgggaaagagccccat
ttgaagcaggcctcaatagacatcggagcatcagaaggattatcctgtgccaagaactct
gagttgcgggggcaaaaaggcagcatggaagaatacgagaaaagcctggctctggagcag
actctagataacacacagggctctcaaaggcataaaataagaagtgaggaggccgtttcc
acaattcacgccacgttgtcctctgaggaaatcccagctgaagactttgagcaaattcct
ctcagcgtgtacctgaaggaaactacggggacagcctccaccaatggaatgcatgaactt
atcgccaacaaatttgaaaaggcactagttactgagcaagtgccagttgttgacaatatg
gaaaaaatactgcctatttttgatgctgtccctgtcgctgacagggagaataacagcacc
attcttgaacaggcaccgtgtgtactgcatacagacagggaaaacaatgttctcgataaa
gaaccatatttgccaaatattgacagcaagaataacaacaacatccctgacaaggtgctg
tatgcacctgttctcgatcaggaaaacaatatttttcttgacaagccaatgagtgaacca
gtgattgacaggaaggagaacggagagattctcatcaaggagccggatgtaccaatcatt
gaggacaaggacgtttcgcctgctgctgaggaagagaaacccatgctagctaccgacacg
cagcccagcgagactgtgacacacactaataagcagtactgtgaagtacgcctgactttg
tctaaaccgttgcctgtgaagaaccgaactgcaagaccatttgggactcgactgctggct
gcagctcaggcgccagcagagaagagtcctgtggctgagtttcctcctccacccacttat
gcagagacattttccagccctcctccagtaactagggtcaggtcacctccggcctactca
gcactgtatcctactgaagaacagaaagctcctgttcctcatgaggctacgtatgtagac
agcagaccaggacctcttcctggaggagaggacagggagtcaccagcaaccgaaacaggc
cttctggaggagtccgtagcccgcagagcaacaaagaagtccatgttcacctttgtcgag
aagcccaaagtggctcctaatccagatctcttgaatttagtccagagagcagataacagg
aaaaaggggagaggacaaggaggagcatccagtctggaagaggagccatttgctctgggc
gcggaggcctctaacttcctgcctgaaaacagatcaatagaaggaccagctcaggctcct
gcagataatgccccagagtggtcttcgtgtttaaggtcaccaagaatacaacccaagccg
atgatcaaatccaaccaaagcctatcagaggcgagaggaaagggggcagaactatttgcc
agacggcagtcgaggatgcagaagtatgtcattgagtctccatcgcacccagacataggc
aggtcaccttctcctaccatgtccctccctccctcctggaaatacgcttcagaaactcat
ctctccccagtcacattccaggcccctcccaaaagtccagccagatctcccaaagctcct
cctctgcctttgtacaacagcaacatgtcggagagcgagatttccaaaaaggagctggag
atctccaagcagcagccttaccagcttcagtcctccttgttcatcctttccccagccaaa
gaccccgtgaggtccttaccaaaaggggcaccgccacccaagcctgtggttgctgagccc
acatatatgagacaggcctcttgcccaacatctcccttgcctccttctcctgtttttcat
ccacttgcccagttcagccagggcagaccatatcctgctcctttcgccccatcacccggg
acttcgcttgcccctcagaatgtccagacaagcatggaagcatcgcaggagccgcctttt
gaatactcttcaagaattttgtcgcctagagcaaaaggagtcttccaagctccaaggcct
tcttattccaccaagaatgctggaattgagcctcaggaaaggaagatgtccctccctgct
tccccgacgtggactccccgactgctgcgccgaccacctagcagtttagacggctgggtg
agtccagcccaaactccagagcccgaggaagggcttatagaggcctttcgagtagccagt
gtcatgaccccgcctcccccgcccatgtctccatcctggagcgaaagatctgtgtcccca
tttcggcaagaggctgaccccaagtccagccgacagatgcaggtgctgctggccagaaac
atcatcaacgctgccaagaggaagagctcttctcccaaagctgtggccatagagagcttc
aggcccttcactcctcctgccactccctcaggtggaagtcctaagagtgtgggcaaccat
tccccaagcccgctgccatctcccaggccaacaagggtggacggatacaggcgtgtgtct
cttcctctctctgccacaccgcctcatcccagtgcgccttcaaacaacagtcccaggttg
ctaggcagccagtccccgacctacaagagcccgctgcagtctcccaaagcagtgcggatg
aatgggaacaagtatttcaccatgcctgccagcactggggcatccctctgccacgcagtg
gcatccaacaatggcctgagaacagcaggcacccattctgcggcccagtctccgaaaccc
tccattgtggagagtcacaggatctccacacccccaggaagcacaaccaggaaatcatcg
tgtcccagccctaagaatgtaggcacctgctcccccaccatcaaaagccctttgcagtct
cccatggtaggagtccgttctccgctaaagcgcttcacctccctgtcacccaccaactca
gacgtatccctcgactcagaagactctgggatcaagtcgcccagcatccgcagcttcaac
atttgtccccggggctggaatggaagcctgaggctgaagcggggaagcctccctgcagaa
gccccctgtacctcctaa
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