Podarcis raffonei (Aeolian wall lizard): 128408004
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Entry
128408004 CDS
T09310
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128408004 (GEMIN5)
03041 Spliceosome [BR:
praf03041
]
128408004 (GEMIN5)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128408004 (GEMIN5)
mRNA cycle factors
P-body specific factors
128408004 (GEMIN5)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128408004 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_RIG_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
PAC11
Beta-prop_TEP1_C
WD40_RFWD3
ASA1
Beta-prop_EIPR1
Beta-prop_WDR41
NBCH_WD40
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_ACSF4
Tricorn_2nd
TPR_IF140-IFT172
WD_LRWD1
CFAP251_N
Nup188_N
Motif
Other DBs
NCBI-GeneID:
128408004
NCBI-ProteinID:
XP_053233074
LinkDB
All DBs
Position
2:complement(66111303..66137676)
Genome browser
AA seq
1565 aa
AA seq
DB search
MLCGTREEGAAAGRRFAAARGDGRCEQRKRKREGEAAREEGDRMAAAWRPGAPERVLTAS
PNWYCSRCSDTSQDGRLFGFAARNSVCLLEIRPSAPSFHGELVGHTERVSGFSFCSYPGQ
NSFCASSSDDGTVKIWDTQTLTVMTEHTLHQNTISAVHWSPKMKDLVVSGDEKGIVICYW
HNRNDSQQFFPEPRTIFCLTCSLHHENLVAIGYKDGIVVVIDISRKGEVVHRLRGHDDEI
HSLAWCPELGEEGICGRQDDFQEDTAVGGVTEEAAVTKGYYLASGSKDQTIRVWSCTRSR
VVMTLKLPFLKRRGGGVETPVKERLWLTLHWPPSQPTHILSSCFGGELLQWDLTQHGKRK
WELLGASSEGQNHSRIAFNLCSLEVEARQLLLSISMDRDVKCWDLATLNCCWTLPSLGGF
VYCLAVSPVDTGCLAVGVGDGMLRVWNTTSINNHYDVKTFWQGIKSKVTALAWHPKKEGC
LAFGTDDGKVGIYDTYSNKPPQISSTFHKKTVYTLAWGPPVLPLSFGGDGDRPSATLYSC
AGEGIVFQHNPWKLGDEAHDINKLIRETNSVKHKLPAHTEISWKPDGSILAIGNEDGSIE
ILRAPDLKLLCTIQQHHKLINAIRWHHDHGAQPELSYMIASGSNNAVIYVHNIKGVIENS
PERPVTITEPFRTLAGHTAKITSLSWSPHHDGRLVSACYDGTAQVWNVLKEEPLHNYRGH
RGRLLCVQWSPVEADSIYTGADDFCVHKWVATKQEHSRPPQGKKNIELEKKRNTQLKPKA
KKKKKPLGKVPSIPDVSDWVNGGENAKESFLEENGLSDQEGEKEQQEQETVERISMEVHK
DSPVCSPLACVTDIPKPHVIHKTPLVRKDQFKPGTDSSMKRKKPRSILPLSTSMDHRSKE
DLHQDCMRLAAFLHSKAQNEDISSCSKDPIHLGLFTDRPALYRMIEAEGKSHLENGHPEL
FQQLMLWKGDLKSALQSAAERGELTDQLVAISPMAGYQTWAWTVEAFAKQLSFQEQYVKA
ASHLLSIHKVYEAVELLKSHNLFREATAVAKARLRPEDPVLKDLYTSWAAVLEKDGHYSM
AAKCYLGAASPYDAAKVLAKKADTTSLKAAAELALIAGEKDLSTMFSFKCAQELMSSKNW
VGAQDVLQQHESLLGQRLVFCVNELLQKCLTEKNLVENRSPSLPCYHSWTVKQECSFTEM
VADVWQSIFGVDTAEQSKNLLEQLRTIEYPPATSHSHPRQVLFHISHDLTLAILSHQTAS
WEETVKATLAAVTRSYDAGNFRLMQEICNLLLPTGCAHLREKLDSTDLQSMAACKSLEAF
VAYGQLYDLWWNPEPVDLRVVEQPGLTSEACTFELSTPGQSNSERVSLPEETEVEDPLSS
GQNNCTHSETDSVASSSLLVERQAKLRGCRVLLSEEYAAIQSTKREISRIQQTLADMINQ
HQKNNLHQSATNSQDLAESPASQSQTKEQVDEPVSLLDLTKQLTEANQKLAEFPDSIKVS
PFPDVLECCLVVLHMSVQHHEVVPELQEKSLELLRKYKGTHICKDEICLILEWMNKILLH
SHAGP
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgctttgcggcacacgcgaggaaggagctgcagctgggcggcgctttgcggcggcgcgg
ggcgacggccgctgtgagcagcgaaaaagaaaacgtgagggggaagccgcccgggaagaa
ggagacaggatggcggcggcgtggcgccccggggcacccgagcgggtgctgacggcctcg
cccaactggtactgcagccgctgcagcgacacctcccaggacgggcgcctcttcggcttc
gcggctcgcaacagcgtgtgcctcctggagatccgcccctccgcgccctccttccacggg
gagctagtcggccacaccgaaagagtttcgggtttctcgttttgttcctatcctggtcag
aacagcttctgcgccagcagctctgatgatggaaccgtgaaaatctgggatacgcagaca
ttgactgtcatgactgaacatacgttgcatcagaatacaatttctgcagtgcactggtca
ccgaaaatgaaagacttggttgtgtctggtgatgagaagggaatagtaatttgctactgg
cataatcgaaatgacagccagcagttcttcccagagcccagaactatattctgtctcacc
tgttctctgcaccatgagaatttggtggccattggctataaagatggaatagtggttgtg
atcgacatcagcagaaagggagaggttgttcatcgactgagaggccatgatgatgaaata
cactctctggcttggtgccctgagcttggggaggaaggtatatgtggtcgacaagatgac
ttccaagaagacactgctgttggaggtgtgacggaagaggcagctgtaacaaaaggctat
tacttggcatcaggaagcaaagatcagactatccgtgtgtggagttgcaccagaagcaga
gtggtaatgactctgaaattgccttttttgaaaagaagaggtggaggtgttgaaacacct
gtgaaagaacgcctctggttaacactacattggcccccaagtcagcccacacacatctta
tccagctgctttggaggtgagctgctgcagtgggatttgactcaacatgggaagcggaaa
tgggaacttctgggagcttcatccgaaggacaaaaccactccagaatagcgttcaatttg
tgttccttggaagtagaggctaggcagttacttctctccatatcaatggacagggatgtg
aagtgctgggacctggcaactttaaattgctgctggacgttgccttctcttgggggtttt
gtgtactgtttggccgtttcccccgtggatacaggctgccttgctgtaggagttggggat
ggcatgcttcgggtgtggaacaccacgtctatcaacaatcactatgatgtgaaaaccttt
tggcagggcattaaatccaaggtcacagctttggcctggcacccaaagaaagaaggctgt
ttagcttttggaacagatgatgggaaagtcggcatctatgacacctactccaacaagccc
ccacagatctccagcaccttccacaagaaaacagtgtacacgttagcctggggacctccc
gtccttccgttgtcctttggaggggatggtgacagaccttcagcaactttgtatagttgt
gcaggagaggggattgtctttcagcacaatccttggaaacttggtgatgaagcccatgac
atcaacaaactaatcagagaaactaattcagtcaaacacaaactaccagcacacacagag
atcagctggaaaccagatggcagcatcttggctattggtaatgaagatggttctattgaa
atacttcgggctcctgacttgaaactcttgtgcaccatccagcagcaccacaagctcatc
aatgctattcgctggcatcacgatcatggggcacagccagaactgagttacatgatagct
tctggctcaaacaatgctgtcatttatgtacacaatatcaagggtgtcatagaaaactcc
ccagagagacctgtgacaataactgaacccttccgtactttggcggggcacacagctaag
attactagcttgtcttggagcccacatcatgacgggcggctcgtatctgcttgctatgat
ggcactgcccaggtttggaatgttctgaaggaagagcctttgcacaactacaggggacac
cggggccggctgctttgtgtgcagtggtcacctgtggaagcggactccatttatactgga
gcagatgacttctgtgttcataaatgggtagctacaaagcaagagcacagccgccctccc
caaggtaagaagaacattgaattggagaaaaagagaaacactcaactcaaaccaaaagcc
aagaagaagaagaagcccttgggaaaggtgccttcaataccggatgtaagtgactgggtg
aatggtggcgagaacgcgaaagagtctttcttagaggagaatggcctgtcagaccaagag
ggagaaaaggagcaacaggagcaggaaacagtagaaaggatttccatggaagttcataag
gattctccagtgtgttcaccgcttgcctgtgtgaccgatattccaaaaccacatgtgatc
cacaagaccccgcttgtgaggaaggatcagtttaaaccaggaacagattcttctatgaag
aggaaaaagcctcgctccatcctacctctcagcacatctatggaccataggtcaaaagaa
gacctgcaccaggactgtatgagactagcagctttcttgcactccaaagctcagaatgaa
gatatatcctcttgttcaaaggatcctatccatttggggctattcacagacagacctgcc
ctgtacagaatgatagaagcagaaggaaaaagccacttggagaatggacacccggaatta
tttcagcagctcatgctgtggaaaggagatctgaaaagtgctcttcagtccgctgcagaa
aggggagagctgacagaccagctggtggccatttcgccaatggctggctatcagacctgg
gcatggactgtagaagccttcgcaaagcagctctcttttcaagagcagtacgttaaagcc
gcgtcccatctcctctccattcataaagtgtatgaggctgtggagctgctgaaatcacac
aaccttttcagggaagccactgcagttgccaaggctaggttgcgtcctgaagatcccgtt
ctaaaggatttgtacaccagctgggcagcagtgctggagaaggatggccattattccatg
gcagccaaatgttacctgggagctgcctctccctatgatgcagccaaagtgctggctaaa
aaggctgataccacctcccttaaagctgctgctgagctggctctgatagctggagagaaa
gatctgtcaacaatgttctccttcaaatgcgcccaagaacttatgtcttccaagaattgg
gttggggcacaagatgtcctccagcagcatgagagtttgttgggacaaaggctggtgttc
tgcgtcaacgaattgctccaaaagtgccttactgaaaagaatctggtggaaaaccgaagc
ccatccctaccttgctaccacagctggacagtgaagcaagaatgctctttcacagaaatg
gtggccgatgtgtggcagagcatatttggtgtcgatactgctgagcagtccaagaacctg
cttgaacagctgagaactattgagtatcctcccgctactagccatagtcatcctaggcag
gttttgttccatatttcccatgatctcacactggcaattctgagccatcagacagcttcc
tgggaggagacagtgaaagccactcttgcagctgtgacccgtagctacgatgctggaaac
ttcagacttatgcaagaaatctgcaacctcctccttcctacaggttgtgctcatctaaga
gagaagctggacagcacagatttgcaaagtatggcagcctgcaaaagcctggaggcattt
gtagcttatgggcaactatacgatctctggtggaacccggaacctgtggatttgcgtgtc
gtggaacaaccagggctgacctctgaggcttgcacttttgagctgtccactcctggccag
agtaacagcgaaagagtctcattgcctgaagaaactgaagttgaagatccgctttcaagc
gggcaaaacaattgcacacactcagaaactgattcagtagccagctcaagcctattagtg
gaaagacaagcaaaactgaggggctgcagagttctcctttcagaagaatatgctgcaatc
caaagtacaaagagagagatctctagaattcagcagactttggcagacatgatcaaccaa
catcagaaaaacaacctccaccaaagtgccaccaacagccaagatttagcggaatcccca
gcaagccagagtcagactaaggaacaagtggatgaaccagtttctctgctagatttgaca
aaacaactaacagaagcaaatcagaaactggcagagttcccggatagtataaaggtttct
cccttccccgacgtacttgagtgctgtcttgttgtgcttcacatgagtgtccagcaccat
gaagtagttccagaattacaggagaagtcattagaactacttagaaaatacaaaggaact
cacatttgtaaggacgaaatatgtctcattctagaatggatgaacaagatacttctacat
agtcatgccggtccgtga
DBGET
integrated database retrieval system
