Podarcis raffonei (Aeolian wall lizard): 128408040
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Entry
128408040 CDS
T09310
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128408040 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
128408040 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128408040 (THOC3)
03041 Spliceosome [BR:
praf03041
]
128408040 (THOC3)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128408040 (THOC3)
Spliceosome [BR:
praf03041
]
Complex C
Other components
EJC/TREX
128408040 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128408040 (THOC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_Vps41
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
RMC1_N
WD40_RFWD3
Tricorn_2nd
B-prop_COPA_B_2nd
Beta-prop_SPT8
TRM82_WD
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
PD40
Beta-prop_WDR75_1st
PAC11
ASA1
Beta-prop_WDR41
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Me-amine-dh_H
PROPPIN
Cytochrom_D1
Beta-prop_WDR11_1st
YNCE
Beta-prop_ELP1_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
128408040
NCBI-ProteinID:
XP_053233155
LinkDB
All DBs
Position
2:complement(68724020..68731096)
Genome browser
AA seq
323 aa
AA seq
DB search
MALSPYVQSMQELFRANTRIREFPAHVAKVHSVAWSCCGRRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIASVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTYRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESSTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccccgtacgtgcagtccatgcaggagctgttccgggccaacacgcgcatc
cgcgagttccccgcgcacgtggccaaggtccactcggtggcctggagctgctgcggccgc
cgcctcgcttccggctccttcgacaagaccgccagcgtcttcgtgctcgacaaggaccgg
ctggtgaaggagaataattaccgtggccatggagacagtgtggatcagttgtgctggcac
cccagcaacccggacttatttgtcactgcgtctggagacaaaaccatccgtatatgggat
gtccgcactactaaatgtattgcctctgtgaataccaagggggagaatattaacatttgt
tggagccccgacggacagactattgcagtagggaacaaggatgatgtggtcaccttcatt
gatgctaaaacatatcggtccaaagctgaggaacagttcaagtttgaggtgaatgagatc
tcttggaacaatgacaacaacatgttttttctcaccaatggcaacggttgcatcaacatc
ctcagctatccagagctgaagctcatccagtcaattaatgcccatccttcaaactgcatc
tgtatcaaatttgacccaacgggcaagtattttgctacaggaagtgctgatgcattggtt
agcctctgggatgtggatgagcttgtatgcgtgcgatgcttttctaggcttgactggcct
gtgaggacactgagtttcagccatgatgggaagatgctggcttcagcctctgaagatcac
ttcattgacattgctgaggtagaaacaggagagaagctgtgggaagtgcagtgcgagtct
tcaacgttcactgtggcttggcatccaaagcggcccctgttggccttcgcctgcgatgac
aaagatggcaaatatgatagcagcagagaagctggaaccgtgaagctctttggtcttccc
aatgactcataa
DBGET
integrated database retrieval system