KEGG   Podarcis raffonei (Aeolian wall lizard): 128408040
Entry
128408040         CDS       T09310                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013  Nucleocytoplasmic transport
praf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128408040 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    128408040 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:praf03019]
    128408040 (THOC3)
   03041 Spliceosome [BR:praf03041]
    128408040 (THOC3)
Messenger RNA biogenesis [BR:praf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128408040 (THOC3)
Spliceosome [BR:praf03041]
 Complex C
  Other components
   EJC/TREX
    128408040 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128408040 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_Vps41 eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_HPS5 RMC1_N WD40_RFWD3 Tricorn_2nd B-prop_COPA_B_2nd Beta-prop_SPT8 TRM82_WD Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 PD40 Beta-prop_WDR75_1st PAC11 ASA1 Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_Nup120_160 Me-amine-dh_H PROPPIN Cytochrom_D1 Beta-prop_WDR11_1st YNCE Beta-prop_ELP1_1st Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 128408040
NCBI-ProteinID: XP_053233155
LinkDB
Position
2:complement(68724020..68731096)
AA seq 323 aa
MALSPYVQSMQELFRANTRIREFPAHVAKVHSVAWSCCGRRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIASVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTYRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESSTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgctctccccgtacgtgcagtccatgcaggagctgttccgggccaacacgcgcatc
cgcgagttccccgcgcacgtggccaaggtccactcggtggcctggagctgctgcggccgc
cgcctcgcttccggctccttcgacaagaccgccagcgtcttcgtgctcgacaaggaccgg
ctggtgaaggagaataattaccgtggccatggagacagtgtggatcagttgtgctggcac
cccagcaacccggacttatttgtcactgcgtctggagacaaaaccatccgtatatgggat
gtccgcactactaaatgtattgcctctgtgaataccaagggggagaatattaacatttgt
tggagccccgacggacagactattgcagtagggaacaaggatgatgtggtcaccttcatt
gatgctaaaacatatcggtccaaagctgaggaacagttcaagtttgaggtgaatgagatc
tcttggaacaatgacaacaacatgttttttctcaccaatggcaacggttgcatcaacatc
ctcagctatccagagctgaagctcatccagtcaattaatgcccatccttcaaactgcatc
tgtatcaaatttgacccaacgggcaagtattttgctacaggaagtgctgatgcattggtt
agcctctgggatgtggatgagcttgtatgcgtgcgatgcttttctaggcttgactggcct
gtgaggacactgagtttcagccatgatgggaagatgctggcttcagcctctgaagatcac
ttcattgacattgctgaggtagaaacaggagagaagctgtgggaagtgcagtgcgagtct
tcaacgttcactgtggcttggcatccaaagcggcccctgttggccttcgcctgcgatgac
aaagatggcaaatatgatagcagcagagaagctggaaccgtgaagctctttggtcttccc
aatgactcataa

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