Podarcis raffonei (Aeolian wall lizard): 128408128
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Entry
128408128 CDS
T09310
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128408128 (TRAIP)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128408128 (TRAIP)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128408128 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-C3HC4_4
zf-RING_11
zf-RING_Vps41
Vps5
WEMBL
Zn_ribbon_8
OVT1
Laminin_II
DUF1664
GAS
zf_RING_Vps8
zf-RING-like
RINGv
zf-RING_16
FANCL_C
ATG17_like
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
128408128
NCBI-ProteinID:
XP_053233356
LinkDB
All DBs
Position
2:complement(71091353..71120068)
Genome browser
AA seq
483 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAIHCGHTFHHLCLIQWFDTAPSRTCPQCRIQVGKRHIIN
KLFFDVALEEQTGLDAESLQNELDRMKAQLAMKEKEKRDIQNIVNSLRETLDLRNATIES
LQKSVTQMTMLCATLKKQMKYLEQQQDDAKSAKEEARRLRNRLKTLEGIETLLQSQRPEV
EKMIREMGTGQAAVEQLAVYCISLKKEYENLKESQKASNDTKEKLRKELFSANHKLQKTV
LELEKTTEEVKSTQTDLRNADNEIMSLKKKIRVMQDTIKVSSLSNEALGRLVSESPAPLE
LLTPKLHRPAHSDEIDLNDTFDVQTPKNDTFDVQTPKHPPHKSIPAPAKKLKLDKKFAPV
TSLSRVLKETVESCSADTDDEHLEDLLPAFIRNSVMSKRPPASNMLVPQRNTGIVSTSGM
CIRVLQCGVFLLNLPTSSQQNPVPGHAFSCLRLQILQNQYALCFLLLVDLLRHLIMQHIV
SIF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgcccattgtaccatctgctcagatttctttgataatgagagggatgtg
gcagctattcactgtggacatactttccaccatttatgcctcatccagtggtttgacaca
gcacctagtcggacttgtccacaatgcagaatccaggttggcaaaagacacataatcaac
aaactgttctttgatgttgccctggaggaacagacaggactggatgcagaaagtctacag
aatgaactggataggatgaaagcccagttagccatgaaagagaaggagaaacgggatatc
caaaatattgtgaattcactaagggagacgctggatttgcgcaatgccaccattgaatca
ctccagaaatctgtgactcagatgacaatgttgtgtgctactctcaagaaacaaatgaag
tatctggagcaacagcaagatgatgcgaagagtgcaaaagaggaggcccgaaggctgaga
aacagactgaaaacattggaggggattgagacactgctgcaaagtcaacgtcccgaggta
gaaaagatgattcgtgaaatgggaacaggtcaggctgcagtggaacagcttgccgtctat
tgtatctcactgaaaaaggaatatgaaaatctgaaggagtctcagaaagcatcaaacgat
acaaaagagaagctgagaaaggagttgttttctgctaatcacaagttacagaagacagtt
ctagagttggagaaaacaacagaagaggtgaagagcacccagactgatctgagaaatgca
gataatgagataatgagtttgaaaaagaagataagagtgatgcaagataccattaaagtg
tcatcattaagcaatgaagcacttggccggcttgtctctgaaagccctgctcctctagaa
ttgttaaccccaaagctccatcgaccagctcacagtgatgagattgacctgaatgatact
tttgatgtacagacaccaaagaatgatacctttgatgtacagacaccaaagcatccacct
cacaagagcatccctgctcctgcaaaaaaacttaaactggataaaaagtttgcacctgtg
acaagtttatcaagagttctgaaagaaacagtggagagctgctcagctgacacagatgat
gaacatctggaagatcttctacctgctttcattagaaactctgttatgtccaagaggccg
cctgcaagcaacatgcttgtaccacagaggaacacaggaatagtgagtacaagtgggatg
tgcatcagagttttgcaatgtggagtgttcctgcttaatctgccaaccagcagccagcaa
aaccctgttcctggacatgccttctcatgtcttcgtctacaaatcttacaaaatcaatat
gctctgtgctttttattgctagtggacctgcttagacacctgatcatgcagcacatagtt
agcatattctga
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