Podarcis raffonei (Aeolian wall lizard): 128408173
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Entry
128408173 CDS
T09310
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
praf01001
]
128408173 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128408173 (DCAF1)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128408173 (DCAF1)
Protein kinases [BR:
praf01001
]
Serine/threonine kinases: Other
Other
128408173 (DCAF1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128408173 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
128408173
NCBI-ProteinID:
XP_053233442
LinkDB
All DBs
Position
2:complement(74074932..74129432)
Genome browser
AA seq
1508 aa
AA seq
DB search
MTSCSELVDSKAELTALLEQWEKEHGSGQDIVPILTRMSELIEKETEEYRKRDPDPFDDR
HPGRADPKCMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTFATGLLGGAMENQDIAANYRDENSQLVAFVLQRLR
ELQVNEVNTKHENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEEVTGDMEISFNL
DSNHKTSSRVNSATKKSGKQHERENFRKAKQKLGFSSEPERMFVELSNSSWSEMSPWVIG
TNYTLYPLTSAIEQRLILQYLTPLGEYQELLPIFMQLGSRDLMMFYIDLKRTNDVLLTFE
ALKYLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMH
PHVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLD
ILNLQTQGALLSDDEIFASRQTGKHTCMAMRRYFEAHLAIKVEQVKQSLQRTEGGILVHP
QPPYKACSYTHEQIVEMMEFLIEYGPGQLYWDPAEVFLKLSCVQLMLQLISIACNWKTYY
ARNDTVRYALDVLAILTVVPKIQLQLAEAVDTVDEGGTSISIVGISIILGLAEGEFFIHD
AEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRMLPQAPRSGEHTLAKMWNVVQSNNG
IKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPV
LQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLI
RNHLISKGLGETATILTKEADLPMTAASHSSAFTPVPAAASPVPLPRTPRIANGISARLT
NHPSVVPAASSVHAQPRQTACQGSLALPGPSQATSSPVIGRISFVRERPSPCNGRKIRVL
RQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPH
QCPEPKQRRQAPTNFTSRLSRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESG
FTCCAFSARERFLMLGTCTGHLKLYNVFSGQEEASYKCHNSAITHLEPSRDGSLLLTSAS
WSQPLSALWGMKSVFETKHSFTDDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLF
NPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIV
NTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLLEERMRSPFGSSFR
TFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDAMNMDTVCRLYEVGRQRLA
EDEEDEEEDQEEEEQEEDDDEDEDDTDDLDELDTDQLLEADLEEEENNENAGEDGENDFS
PSDDEELANLLEEGDEGEDEDSDADEEVELILGDMPPCFSAIRHMNLGASTLSGLQRFSC
IFVSPLCS
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatgttctgaacttgtggattccaaggctgagcttactgctttgctggagcag
tgggaaaaagagcatggcagtgggcaagatattgttcctatccttactcgaatgtcggaa
ttgattgagaaggagacagaagagtaccgcaagcgagatccggatccatttgatgatagg
caccctggtcgggcggatccaaaatgtatgcttggccacttgctgaggatactcttcaag
aacgacgatttcatgaatgcactggtgaatgcttatgtgatgacaagcagagaaccacct
ttgaataccgctgcctgtcgactccttttggacatcatgcctgggctggaaactgctgtc
gtctttcaggaaaaggaaggcatagttgagaatctcttcaagtgggcacgagaggctgat
caacctctgaggacatttgcaactggattgctgggaggggccatggagaaccaagacatt
gctgctaactacagagatgagaattctcaattggtggcgtttgtgcttcagcgcttgaga
gagctgcaagtgaatgaagtgaacacaaaacacgaaaacaagcggcctagtcctcgaaaa
gtaccctcagactctctgctgcctctggatgaagaagctgtggacatggattatggggag
atggctgtggatggcgaacaggaggaagttaccggggatatggaaatctcatttaacctt
gactcaaatcacaagactagtagtcgggtgaactctgccacaaaaaaatcagggaagcaa
cacgaaagagagaatttccggaaagcaaaacaaaaactcggcttctcttcggagccagaa
aggatgtttgttgaactgtctaacagcagctggtcagagatgtctccttgggtgattggc
acgaactataccttataccctttgacctccgctatagagcaaaggttaattctgcagtat
ttgactcccttaggggagtatcaagagctgcttcccatctttatgcaacttggatcaaga
gacctaatgatgttctatattgatttgaaacggaccaatgatgtactgctcacctttgaa
gccctgaagtatttggcatcactgctgctccacaacaagtttgcaacagagtttgttgct
catggaggagtgcagaagctgctggagattcctcgtccttccatggcagctacaggtgtc
tccatgtgcttatattatttgtcttacaatcaggatgccatggaaagggtctgcatgcat
ccccacgtgttatcagatgttgtgaactacaccttgtggttgatggaatgctctcatgcc
tcgggctgctgccatgctaccatgttcttctctatttgtttttcattccgtgcggtcttg
gagctcttcgataggcatgatggcttacggcgccttgttaacttgattagcactcttgat
atcttaaacctgcaaacccaaggtgcactactaagcgacgatgagatttttgccagccgc
cagactgggaaacacacttgcatggccatgcgcaggtattttgaggctcatcttgccatc
aaagtggaacaggtgaagcagtcactccagcgcactgaaggtggcatcctggtccatccg
cagcctccatataaggcttgttcctacacgcatgaacagattgtagagatgatggagttc
ctaatagaatatgggccaggacagctctattgggatccagcagaggtcttcctcaagctg
tcttgtgtgcagctcatgctccaacttatttcaatagcatgcaactggaagacctactat
gctaggaatgacacagtgcgttacgctctggatgttctggccatccttactgtggttcct
aaaatccagttgcagttagcagaggcggtagatacggtggatgagggaggaacttctatt
tccattgtgggtatcagcatcattctggggcttgctgaaggagaattctttatccacgat
gcagaaatccagaagtcagcccttcagattattattaactgtgtgtgcggcccagataac
cgcatctccagcattggcaaattcatctctggcaccccacgccggatgctcccccaggca
cccaggagcggcgagcacaccctggccaagatgtggaacgtagtgcagtccaacaacggc
atcaaggtgctgctgtctctgctgtctgtgaaaatgcccattacagatgcggaccagatc
cgagcgttggcctgcaaagccttggttgggttatcccggagcagtacggtccggcagatc
atcagcaagttgcctctcttcagcagctgccagatccagcagctgatgaaggagcctgtg
ctccaggataagcgcagcgagcacgtgaagttttgcaagtatgccgctgagctgattgag
cgggtctctgggaaacccttgctgattgggacagacgtctccttggctcgacttcagaaa
gcagacgttgtggctcagtcgaggatttcgtttcccgagaaggagctgctgcttttgatc
aggaaccatctcatctctaaagggctgggagaaactgctaccatccttaccaaggaggcg
gatctacccatgacggctgcttctcattcctccgccttcacccctgttcctgctgccgcc
tctcctgtgcctctgcctcgtacccctcgtatagcgaatggcatttctgcccggttgact
aaccacccttctgtggttcctgctgcttcctctgtccatgcccagccaaggcagactgcc
tgccagggctcgcttgctctcccggggccatctcaggccaccagctctccagtgattggc
aggattagctttgttcgagagaggccgtctccctgcaatggcaggaagattagagtgctt
cggcaaaaatcagaccatggcgcctacagccagagcccagctatcaaaaagcagctggac
aggcacctcccttcccctcccacgctggacagtataatcacagagtaccttagggaacag
catgctcgctgcaagaaccctgtggccacttgccctcctttctctctttttacaccccac
cagtgtcctgagccaaaacagaggcgccaagcgccaactaactttacctcgcggctgtca
cgcagggcggcctttccaaagtacggcggggtggatggcgggtgctttgataggcacctt
atattcagcaggttccgtccaatttctgtcttccgggaagcaaatgaagatgagagtggc
ttcacgtgttgtgcattttctgcgcgggagcgattcctgatgctgggcacttgcacgggg
cacctgaaactctacaacgtcttcagtgggcaggaggaggccagctataagtgccacaac
tctgccatcacacaccttgagccttctagggacggctctttactgctgacgtctgcatct
tggagccagcctctttctgcattgtggggaatgaagtctgtctttgaaaccaagcattcc
tttacagacgaccactatgtggaattcagcaagcactctcaggacagggttattggcaca
aagggggacattgcccatatctatgatattcagactggcaacaagctgttaactctgttt
aatccagatcttgcaaacaactacaagaagaattgtgccacttttaaccccacagacgac
cttgtcttaaatgatggcgtcctttgggatgtccgctctgcacaggctattcacaagttt
gataaattcaacatgaccatcagtggtgtttttcatccaaatgggctggaagtcatagtc
aacacagaaatttgggacctgcgaactttccacttgctacacacagtgccagccttggat
cagtgccgtgtcgtcttcaaccatactggaacagtcatgtatggagcaatgttgcaggcc
gacgatgaagatgatcttctggaagagaggatgcggagtccctttggatcatctttcagg
actttcaatgcaacagactacaaaccaattgccaccattgatgtgaaaaggaacatattt
gacctgtgtacagacacaaaggactgttacttggcggtgattgagaaccaaggaagcatg
gatgccatgaacatggatactgtttgcaggctctacgaggtgggcaggcagcgtttggca
gaagatgaggaggatgaggaggaagaccaggaggaggaggaacaggaagaagatgacgac
gaggatgaggatgacacagatgaccttgacgagctggacactgaccagcttctagaggct
gatctggaggaagaggaaaacaacgagaatgcgggagaggatggagaaaacgacttctcg
ccttctgacgatgaggagctggccaacctgcttgaagagggagatgaaggagaggatgaa
gactctgacgctgatgaggaagttgagctgatcctcggggatatgccgccctgcttctct
gcaatcaggcacatgaacctgggggcaagcaccctgtcaggtctccagcgattttcttgt
atatttgtcagtcctctatgttcttaa
DBGET
integrated database retrieval system
