KEGG   Podarcis raffonei (Aeolian wall lizard): 128408198
Entry
128408198         CDS       T09310                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128408198 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:praf03019]
    128408198 (WDR82)
   03036 Chromosome and associated proteins [BR:praf03036]
    128408198 (WDR82)
Messenger RNA biogenesis [BR:praf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     128408198 (WDR82)
Chromosome and associated proteins [BR:praf03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     128408198 (WDR82)
    COMPASS/SET1 complex (yeast)
     128408198 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_EIPR1 MinC_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 128408198
NCBI-ProteinID: XP_053233504
LinkDB
Position
2:75270110..75290034
AA seq 314 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQVGLMHPQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSF
DKGPFATFKMQYDRTCEWTGLKFSSDGKLVLISTNGGFIRLIDAFKGAVLHTFAGFNNTK
AVTLEASFTPDSQFIMIGSEDGKIHVWNGETGMKVAVLDGKHTGPITCLQFNPRFMTFAS
ACSNMAFWLPTIDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaacgtgctgcggagcttccgcgtggccaaagtcttccgcgagaac
tcggacaagatcaactgcttcgacttcagccccaacggcgagaccgtcatctccagcagc
gacgacgactccatcgtgctctacgactgccaggagggcaaacctaagagaacactatac
agtaaaaagtatggagtggatctcatcagatacacgcatgctgccaacactgtggtgtac
agttccaataaaatagatgatacaatcagatacctctctctgcacgacaataaatacatc
agatacttcccaggacatagcaaaagagttgttgctctgtccatgtctccagtggatgat
acctttatttctgggtcgcttgataagaccatcagactttgggatcttcgatctccaaat
tgccaggtaggcttgatgcatcctcaagggaagcctgtgtgttcatttgatccagagggg
ctgatttttgcagctggggtcaattccgaaatggtgaagctttatgatcttcgctcattt
gataagggtccatttgctacctttaagatgcagtatgaccgaacctgtgagtggactggt
ttgaagttcagcagtgatggtaaacttgttcttatatcaaccaatggagggttcatccga
ctcatagatgcctttaaaggagctgttcttcatacatttgcgggatttaacaacacaaaa
gctgttacactggaagcttcattcaccccagactctcagtttataatgattggatcagag
gatgggaagatccacgtctggaatggagagactggaatgaaagtagcagtgctagatggg
aagcacacaggccctattacctgtttacagttcaacccaagatttatgacctttgccagt
gcatgctccaatatggccttttggttacccactatagatgactaa

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