Podarcis raffonei (Aeolian wall lizard): 128408208
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Entry
128408208 CDS
T09310
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128408208 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
praf00536
]
128408208 (STAB1)
Glycosaminoglycan binding proteins [BR:
praf00536
]
Hyaluronan
Cell surface receptors
128408208 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF
EGF_TEN
FXa_inhibition
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
128408208
NCBI-ProteinID:
XP_053233528
LinkDB
All DBs
Position
2:76061136..76155565
Genome browser
AA seq
2584 aa
AA seq
DB search
MTMKTSGFFFLFYAACLISTAEEKSQQLKSKRCDQKFTYTRDTLCTSCTVVSRLPCPKRW
TKLLGKDGQKNCRYTLKLGETTLSLPGCAQICKQEFEEKRCCPGFWGPACYECPVGSGNV
CSGRGTCLEGSAQNGTCICEEKYSGYACQDCLDETRFGPDCQSVCECQHGICNHGPSGDG
SCTCYAGYTGPKCDQELLNCGGVICEANSICVVKGGQPRCECLPGYKKNGIYCQDQDPCS
SYPCSSFATCKTLGPNKYECTCKAGYLGNGKICQPINPCLTDNGGCPRNSSLCSYIRPGE
ARCLCKPGFIRHGDKDCFSTLSCQPHNCDRSAKCEIDPDASIRCTCKDGEIGDGRKCYKT
FLGEISSLNVVGRNARAMSHAIKMFEMGCSFLLENHGPLTVLVPANLYYDRMELNETLAN
NLCKLHIIPGLHLVDHTEKDLWTLAGPKVIFSSQGSPTKNYRYSDEPAQQYFIRERNLPA
ANGIIHIVSMLRKNPLLDNLSNSQKTIGEILVSMEIASRFETILENCGLPSFLDGPGPFT
VFVPSNEAVDKLRDGRLIYLFTEGINKLQELVKHHIYTKAAVDVETLITLPQILTMANQV
LTIHFSEEGRILLGDSEVALNTRNILASNGIIHTLDGIFIPPSIIPILPHRCNEKDYKVV
AGSCVDCSALNTSVCPPESTVMAEGIFPGECVYIHDPLGLNIMKKGCKRNCNQTVVVPGC
CKGFFGSSCTPCPSGFTNPCYGKGTCNDGIRGNGQCHCHENFRGIACHICSNPNKHGENC
DEDCGCVHGICDNRPGSKGVCQPGSCKAGYSGEFCDRSSQKCASSDDAPLNCHLNAVCIR
NDTVRCVCLDGYEGDGFSCEPIDVCSKPEQGGCSKNAMCTSTGPGTATCQCNKGWTGDGK
DCIAIDNCAMETRGGCHVNADCIYIGPGQSSCICKRNYNGDGYSCDPVAPCSVDNGGCHE
LATCQSLSTGEKACRCSDGYMGDGVLCYGNIMKELVRNYHFSDFYGWIKKSLFSIPEGTN
LTVLVPVKEAIQNLSKDEKDFWLQPDMLLLLVRGHFLLGSFTTEQLKKYVGQELPTLSPR
IRWKINNSSGAITIQNASIVLGDIPAINSTIYIINKVLLPTLDDIPPRAPGLQQQLNATP
SFSSFKELLEQYHLIAKIESSEKYTIFVPGNSAIEKYCQDANITQLDMDTVQYHVVLGVK
LLATDLKSGVHKTSMLGFSYWLMFYKNTTQAYVNKVLLNGQFVETTNGMLIGVSEVLRVQ
KNRCSINSTTVQKTRCAKCDKKIRCPNGSVLAGAPANGSFPHCVLKSQGRRSVGCHFTCI
KVSLVSVCCSGYYGHMCEMCPGKPDRWCSGNGVCQDGIDGNGECQCHEGYHGTACEMCQP
GRYGANCKSECNCAHGICNDGLLGDGSCTCAAGFKGVSCDIEVKKDFCNGTCDEHANCVN
DSTTSQPTCLCSAGYNGNGTSCTEIDPCAVGNGGCSPHASCTKVGPGQRTCSCKEGYAGD
GTLCREIDLCLDKNGGCHQFAECVKTGPGLVACNCLPGFTGDGVNKCERTNPCKENNGGC
SPHALCLSTSGDRICICLSGTGDGFICTGSVWQELSTRQAASKFVNHFKRFSTVELTGSG
PFTVFVPHADYIKNSTTFSEWEEKGFIKDLLNYHIVICHKLQSEDLQLKNSITALSGLKI
KVSMKENSVYLNDEAKIIESDIMGNNGVLHFIDKILIPYDLQNINISSNLAQETITEVAD
AYGYKIYSKLLVEAGLLNLVNSTLHQPFTMLWPTDAAFNSLPEDMQKWLYHREHRSKLAA
YLKGHMIRDTLLSGSSLMNTHGLRTMHGSLISFGCSKTSAGEILVNNGNARIVQQLMKFN
GGIAYGIDQVLEPPDLGSRCDEFRDVERPSAAACGSCGNPPHCSGVAKDRGETQSCYYYE
DGLSTRPWYSLSERRSPWLYRSHGLNRWRTLSRSLMKGCRRTCFVVEWVPQCCPNHYGKD
CQVCPGGLKEPCSNHGTCNDGQQGSGWCSCDKAFIGTACENCAPGHYGPECKECNCTSNG
ICDEGLHGDGFCFCSAGWTGERCETELAAVPVCSPACHRNAVCRSNNTCECSLHYEGDGW
TCKVIDRCAKDNGDCSDHANCTQIGIDVSCSCFPDYEGDGYICSPIDRCADGMNGDCSEH
ATCINTGPNSRRCECHAGYIGNGIQCLEEAIPPIDRCLENNGQCHSEALCSDLHFEEKTV
GVFHLQSPQGKYRFTYQEAEAACAAEGATVATLKQLSAAQQMGFHQCIVGWLYNRSAGYP
TVYPSLKCGSHHVGIVDYGFRSNASEKWDAYCYRVQDVQCVCRDGFVGDGYTCTGSLVAV
LAQKANFSVYYSMVLDYANATQEGWEFFNFLSTDMTYKTLFVPLNSGFQKNASLTLNDLK
LHSSARDVALMSFNLTSGTVIPSQAGFNLSIADSTNNTLFPQGCKMINNSVIVEWDILAS
NGIIHAIEAPLMAPQLGQLDQVVGAVKSPAAVTISVSIVVSLVLCAMVAGMSYIYLKRKN
QGFQFRYFKAELEDDEPSPWEERSPHLVSIPNPIYGADISIYEPFEDSLTGEDFSDAFGI
RGDQ
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaaaacttctggcttcttctttttattctatgcagcatgcttgatttctaca
gctgaagagaaaagccagcagttaaagtctaagcgatgtgaccagaagtttacatataca
cgcgatacactttgtacctcttgtaccgtggtttccaggctgccatgcccaaaaaggtgg
acaaaattacttggaaaggatgggcagaagaactgcaggtatacactcaagctaggcgag
actactctttcactccctggttgtgctcaaatatgtaagcaggaatttgaggagaaacgc
tgctgtcctggtttttggggtcctgcttgctacgaatgccctgttggatctggaaacgta
tgcagtggtcgggggacttgtttggaaggttcagcacagaacggaacttgcatctgtgag
gagaagtatagcggctatgcatgccaagactgcctggatgaaacacgttttggccctgat
tgtcaatccgtatgtgagtgtcaacacgggatctgcaaccatggaccttctggagatgga
agctgtacctgctacgctggctatactggcccaaaatgtgaccaagaacttctcaactgc
ggaggtgtaatctgcgaagccaattccatttgtgtggtgaagggtgggcagccgaggtgt
gaatgtcttccagggtacaagaaaaatggaatttactgtcaagaccaggatccttgcagc
tcctacccatgctcctcatttgcaacttgcaagactcttgggccaaacaagtatgagtgt
acttgcaaagctgggtacctcggaaatgggaagatttgccaacccataaatccttgtctc
actgataatggaggctgccctagaaattcttccttgtgtagctatataagaccaggagag
gcacgttgtctgtgtaagccaggattcatcaggcatggtgataaagattgcttcagcacc
ctttcatgtcagccgcataactgtgacagatctgcgaagtgtgagattgacccagatgct
tcaataagatgtacctgcaaagatggagaaattggagatggcaggaagtgttacaaaacc
ttcctgggggagatctcttctctgaatgtggtagggagaaacgccagggcaatgagccat
gcaatcaaaatgtttgagatgggttgttcgtttctcctggaaaaccatgggcctttaact
gtgcttgtgccagccaatctttactatgacagaatggagttaaatgaaacccttgcaaat
aatttatgcaaactgcacataatccctgggctgcatttagtggatcataccgaaaaggac
ctgtggacattagctggtccgaaagtgatattctccagtcaggggtcacccacaaagaac
tacaggtactcagatgaaccagcacaacaatattttattagagaacgaaacttgccagct
gctaatgggatcatacatatcgtcagcatgttaaggaaaaaccccctcttggacaacctt
agcaattctcagaaaacaattggagaaattcttgtttcaatggagattgccagccgattt
gaaaccatattggaaaactgtggtctgccttcatttctggatggcccaggacctttcact
gtgtttgtaccaagcaatgaagcagtggacaaattaagagacggaaggctaatttatctc
ttcacggagggaataaacaagctccaggaacttgtgaagcatcatatctacacaaaagca
gcggtagacgtggaaacgctgattaccttgccacaaattttgaccatggcaaatcaggtt
ctgacaatccatttcagtgaggagggaagaattctgttaggtgactctgaggttgcctta
aacacaaggaatattttggcatcaaatggtatcattcataccttagatggcatcttcatt
cctccatcaatcatccccattctgccgcatagatgcaacgaaaaggattataaagttgta
gcgggatcttgtgtggactgtagtgcccttaataccagtgtctgcccacctgaaagcaca
gttatggccgaggggatctttccaggggagtgtgtgtacattcatgacccattaggcttg
aacattatgaagaagggttgcaaaagaaactgcaaccaaactgtggtggtacctggatgc
tgcaaagggttctttggttcttcttgcaccccatgtcctagtggatttaccaatccgtgc
tatggcaaaggaacttgcaacgatgggattcgtgggaatggccagtgccactgccatgag
aatttcagaggaattgcctgccacatttgttcaaacccaaacaagcacggagagaactgt
gatgaagattgtggctgtgtccatggaatttgtgataacagacctggaagcaagggcgtt
tgccagcctggctcatgtaaagctggctacagtggggaattttgtgacaggagctctcag
aagtgtgcttcttccgacgatgcccctctgaattgccatttgaatgcagtctgcatccgg
aacgatactgtaaggtgtgtctgccttgatggctatgaaggggatgggttttcatgtgag
cctattgatgtctgcagcaagccagaacagggaggatgttcaaaaaacgccatgtgtacc
agtacaggccctggaacagcaacctgccagtgtaacaagggctggactggggatggaaag
gactgtattgctatagacaactgtgcaatggaaaccagaggaggctgccacgtcaatgct
gactgcatctatattgggcctggacagagcagttgtatatgcaagagaaattacaatggc
gatggttacagctgtgaccctgttgctccttgctctgtggacaatggtggctgccatgaa
ctggctacatgccagtctcttagtactggagagaaggcttgccgttgctctgatggatac
atgggagatggagttctatgttatggaaatataatgaaggagttagtaaggaattaccac
ttttctgacttctatgggtggattaagaaatccctcttcagcatccctgaaggaaccaac
ttgactgttttggtaccagtgaaagaagccatccaaaacctaagcaaagatgaaaaagat
ttctggctacagccagacatgctattattacttgtcaggggccacttccttctgggttct
ttcacaactgagcaactcaagaaatacgtgggccaggagctgcccacccttagcccacgg
atcaggtggaaaattaacaacagcagtggggccataacgattcagaatgcaagtattgtt
ttgggtgacatccctgctattaacagcactatttatatcatcaacaaggttttgttgccc
accttggatgacatccctccaagagccccaggtctgcagcagcaacttaatgcgacaccc
tccttcagtagcttcaaggagctgctagagcaataccatctgattgcaaagattgagtca
tctgaaaaatacactatttttgtcccaggaaatagtgcaattgagaagtattgccaagat
gctaatattacacagctggacatggacactgtacaataccatgttgttcttggagttaaa
ctgttggccactgacctgaaaagcggagttcacaaaacatcaatgctaggattctcatac
tggctgatgttttacaaaaacactactcaggcatatgtaaacaaagtcctcctgaatggt
cagtttgttgaaacaacaaatgggatgttgattggggtttctgaagtcctgcgagttcaa
aagaaccgttgtagtatcaacagcactacagtgcaaaagacaagatgtgcgaagtgtgac
aaaaaaatcaggtgcccaaacggatcagtgcttgctggagcaccagcaaatgggagtttt
cctcactgtgtattaaagtctcaaggccgcagatcagttggctgtcatttcacctgcatc
aaagtttccttagtctctgtctgctgttcaggttattatggccatatgtgtgagatgtgc
ccgggaaaaccagaccgttggtgttctggaaacggagtgtgtcaagatggcattgatggc
aatggcgagtgccaatgccatgaaggttaccatggaacggcctgtgaaatgtgtcagcca
ggaagatatggagccaactgtaaatcagaatgcaactgcgctcatgggatatgcaacgat
ggactgctgggggatggaagctgcacctgtgcggcaggctttaaaggggttagctgcgac
atagaagttaaaaaggatttctgtaatggcacttgcgatgaacatgcgaattgcgtcaat
gactctaccacttcccagcccacttgcttgtgttctgctggatacaatgggaacggaacc
tcttgcacagaaattgatccctgtgcggtgggcaatggaggctgctccccacatgccagc
tgtacaaaagttgggcctggtcaaagaacttgctcttgtaaagaaggctatgctggagat
gggactctatgccgggaaattgatctatgcttagacaagaatggaggatgtcaccagttt
gccgagtgtgttaaaacaggaccaggcctcgttgcctgtaactgtcttcctgggttcact
ggcgatggtgttaacaagtgtgagcgcactaatccttgcaaggagaataatggaggctgc
agtccacatgctctctgtctctctacaagtggggatcgaatctgcatttgtttatctggt
accggcgatggatttatatgcacaggcagtgtgtggcaggagctcagcacaagacaagct
gcatctaaattcgttaatcatttcaaacgctttagcactgttgaattgacgggatctgga
ccattcactgtttttgtcccacatgctgattacataaagaacagcaccacgttttcagaa
tgggaagagaagggtttcatcaaggatttgcttaactatcacatagtcatctgccacaag
ttacagtcagaagacttgcagttgaaaaattccatcacagctctatctggactcaaaata
aaggtttccatgaaagagaacagcgtgtatttaaatgatgaagcaaagataattgagagt
gacattatgggaaacaatggtgtcctacatttcattgacaagatcctaatcccatatgac
ctgcagaatataaacatttcatccaacctagcacaggaaaccatcacagaggttgcagat
gcttatggatacaaaatctacagcaagcttctagtggaggcaggacttcttaatctggtg
aacagtaccttgcaccagcccttcacaatgttgtggcctacagatgcagcatttaattct
ctccctgaggatatgcaaaaatggttgtatcacagagaacaccggagcaagttggctgct
tatctcaaaggacacatgatcagggacacgctgttatcgggttccagcctgatgaatact
catggtttaagaacgatgcatggatcactcatctcatttggctgcagcaagacaagtgcc
ggggaaattctggtgaacaatggcaatgcaaggattgtacagcagttaatgaaatttaat
ggtgggattgcttatggtattgaccaggtgctggaacctccagacttgggatcccgctgt
gatgagtttcgcgatgttgagcggccatcggctgctgcttgcggttcctgtggtaatccg
cctcattgttccggtgtcgcaaaagacaggggggagacccagtcttgttactattatgaa
gatggattgtccacccgtccatggtactccctttctgaaagaaggtctccctggttatat
cgttcacatgggctgaatagatggcgtacactttcaaggtccttgatgaaggggtgcagg
agaacatgctttgtcgttgagtgggtacctcagtgctgtccaaaccactatgggaaagat
tgtcaggtgtgtcctggagggcttaaggaaccatgcagcaatcatggtacctgtaacgat
gggcagcaaggctcgggatggtgctcctgcgacaaggccttcattgggacagcttgcgag
aactgtgccccaggccactatggaccagagtgcaaagagtgcaactgtaccagtaatggg
atctgcgatgaggggctgcacggagatggcttctgcttttgcagtgcagggtggacagga
gagcgctgcgagactgaactcgctgcggtgcctgtgtgttccccagcctgccatcgtaat
gctgtgtgccggtccaataatacatgcgaatgtagcctacattatgagggagacggatgg
acatgcaaagtgattgaccggtgtgcgaaagacaacggtgactgcagtgaccatgccaac
tgcacacagattgggattgatgtttcctgcagctgtttcccagactacgaaggtgatggc
tacatctgcagccctattgacaggtgtgcagatggcatgaatggagattgcagtgagcat
gccacttgcatcaacacaggtcctaattcccgacggtgtgagtgccatgccggttacatt
ggaaatggaatccagtgcttggaggaagctatcccacccatagaccgttgcttggaaaat
aatgggcagtgccactctgaggctctctgtagtgacctgcatttcgaagaaaaaacagtc
ggggtcttccacctgcagtctccccagggaaagtacagatttacttatcaagaggctgaa
gcggcttgtgctgctgagggagctacggtggccactcttaagcagctgtctgcggcacaa
cagatgggtttccaccagtgcatagtaggttggctttataataggtcagcaggctaccca
actgtgtacccgagtttgaagtgtggcagtcaccatgttggaattgtggactacggcttt
cgaagtaacgccagtgagaagtgggatgcttactgctacagagttcaggatgtgcagtgt
gtctgtagggatgggtttgtgggagatggctacacatgcacagggagtcttgtggcagtg
ctggcccagaaggcaaatttctcagtctactattctatggtactggattatgccaatgcc
acccaagaaggatgggaattttttaatttcctctccacagacatgacttacaaaactctt
tttgtacccctgaactccggctttcagaaaaatgcatctctaacactgaatgatctgaag
cttcattcatctgcgagagacgtggccctgatgagcttcaatctcacgtctggtaccgtt
ataccttcgcaagccggattcaacctttccattgcagattccacgaataacaccctcttt
cctcagggttgtaagatgattaataattcagtgatagttgaatgggatattctggcctcc
aatgggatcattcatgctattgaagcacctctgatggcacctcaacttgggcaacttgac
caggttgttggtgctgtgaaatcacctgctgctgtgaccatcagtgtatccattgtagtc
tccctagtactgtgtgcaatggtggctggcatgtcctacatctacctcaaaaggaagaac
caagggttccagtttcgctatttcaaggctgagctggaagatgacgagccttctccctgg
gaggaaaggagcccacacttggtgtccattccaaatcccatttatggagcagacatttca
atctatgaaccatttgaggattctctcactggagaagatttttcagatgcctttggaatt
cgaggcgaccagtaa
DBGET
integrated database retrieval system