Podarcis raffonei (Aeolian wall lizard): 128408389
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Entry
128408389 CDS
T09310
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128408389 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128408389 (XPC)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128408389 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
128408389
NCBI-ProteinID:
XP_053234009
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Position
2:complement(88063296..88085712)
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AA seq
997 aa
AA seq
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MAKKRKGVVQLPGVGKKLKGEVAASASSSGPKTQQQQQEDDFEEEKPSQKKRLPKTASGK
KKEKEQERDIVQPPCRNSNQKGPKPKVKEEKNKVVESKGSCKKRVKCSGLQSTPLKKETK
AKKESPITKRKRDEEEDGDDDDEDDESEDEWEDVEELHQPEIEILKELPAPALPNKTVEI
EIETPEQAKKRERREKRQVKFETYLRRMMKRFNKGVHEDTHKVHLLCLLANGFHRNRICS
QPDLQAIGLSIIPTHFTKVPAGRVDRLFLSNLVKWFVATFTVNGELSDSEESWQSTLERR
FAVYAARDEEELVHIFLLILRALQLLCRLVLSLQPIPLKVSAEKGKTSSSKKRSPSAVSE
ESGGSAKKPKRALKKCAGPSKVKPEAGQEKVLSRSQEADRKSSPTGAKRTVNKPTPPRSA
QEEKEPGVSNLREKGGMGRTKNDRLRKVASKVSYKEESGSDDGRDSEFHASEEDEDESSI
SDEDFETPKRKQRSSLGTPKAKAALNNRRKSGPAVLNVPKNSRAVESSLGEAATPGSSNP
SKKRNKIISSDEDEGGDVRPGQQRGIDQWLEVFLEREDKWVSVDCVHGTVGQPLLCFRHA
TKPVCYIIGIDNDGCVKDVTQRYDPAWMTSTRKCRVDAEWWEDTLEPYRSPFVEREKKEE
REFLVKLQDQPLPTAIGEYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCIH
TLHSKDTWLKQARVVRIGEVPYKARSGNGWEYWTRVVFAQMVIGYSNQARKARMAEPANR
DKKDLPLFGLWQTEEYQPPVAVDGRVPRNEFGNVYLFQPGMLPIGCVQLKLPNLHRVARK
LDIDCVPAVTGFDFHGGYSHPVTEGYVICEEYKEVLVAAWENEEAEREKKEKEKREKRVL
GNWKLLTKGLLIKERLKRRYSTKNEAAGAMVTPGGGFSSDEDEGGGEPSSETPAGDVDVS
WPQNRQLEQEREGGKRTRKSKREKKGEAKYLFPFEKL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagcgcaagggggtcgtgcagctgccgggggtgggcaagaagctcaaggga
gaagttgcagcctccgcctcctcctccggtcctaaaacgcagcagcagcagcaagaggat
gattttgaagaggaaaaacccagtcagaagaaaaggttgcccaaaacagcttctggaaaa
aagaaggaaaaggagcaggagagggatatcgttcagccaccttgcagaaattcgaatcag
aaaggaccaaagcccaaagtgaaggaggaaaagaataaagtggtagaaagtaaagggtcc
tgtaaaaaaagggtaaaatgcagtggtctgcagagcactcctctaaagaaggaaacaaag
gcaaaaaaagaatctcccatcacaaagagaaagagagatgaagaagaagatggtgacgat
gatgatgaagatgatgaaagtgaggatgagtgggaagatgtagaagaacttcatcagcct
gagatagagatactcaaagaacttcctgcaccggcattacccaacaaaacagttgagata
gaaattgagacacctgaacaggcaaagaaaagagagagaagagagaaaaggcaggtcaag
tttgagacgtatctgcggagaatgatgaagcgcttcaacaagggagttcatgaagacaca
cacaaggtccacctactgtgcctgctagccaatggcttccatagaaacaggatctgctct
cagccggacctccaggcgatcggcctctctatcatccccactcattttactaaagtgcct
gcgggccgcgtagaccgcctgttcctgtcaaatcttgtcaagtggtttgttgcgacattc
actgtcaatggggagctctctgatagcgaagaaagttggcagtccaccctagagaggcgt
tttgctgtgtatgctgcacgagatgaggaggaattggttcatatatttttactcattctg
cgagcattgcagctactttgccgccttgtgttgtctttacagcccattcctctgaaagtg
tcggcggaaaagggaaagaccagctcctccaagaagcgctctcccagtgcagtttccgag
gaatcaggtggctctgccaaaaagcctaaacgtgccttgaaaaaatgtgcagggcctagt
aaggtcaagccagaggcaggccaagagaaggtcctgtcaaggagccaggaagctgacagg
aaatcatccccaacaggagccaaaaggacagtaaataaacctactccacctaggagtgct
caggaagaaaaggaacctggtgtgagcaacctgagggaaaagggagggatggggaggacc
aaaaacgaccgcctacgaaaagtggcctcaaaagtatcatataaagaggagagtggaagc
gatgacggcagggattctgaattccatgcttcagaggaagacgaggatgaaagtagcatc
tctgatgaggacttcgaaactcccaagaggaaacagaggtcgtcactagggaccccaaaa
gcaaaagcagctcttaacaacaggcggaagtctgggcctgcggtgctgaatgtacccaag
aactctcgggcggttgagagttcgctgggggaagcggctaccccaggctcttcaaacccc
tcaaagaaaaggaacaaaataatttctagcgatgaggatgaaggaggtgatgtgagacca
ggtcaacagagaggcattgaccagtggctggaggtttttctcgaacgggaggacaagtgg
gtcagtgtggactgtgtccatggcaccgttgggcagcctctgctgtgcttcagacacgcc
accaagcccgtgtgctacatcatcggcattgataacgacgggtgcgtcaaggacgtgaca
caaagatacgacccggcgtggatgacatcaacgaggaagtgccgtgtggatgccgagtgg
tgggaggacaccttggaaccgtacagaagcccttttgtggagcgagagaaaaaggaagaa
agggagtttctagttaaacttcaagaccagcccctgccgacagccattggtgaatacaag
aaccacccgctttatgccttgaagaggcatctccttaaatatgaagccatctatccagag
acagctgctatactagggtattgccgtggggaggctgtgtattccagagactgtatccat
acgctccactccaaagacacctggctgaagcaagctcgagtggtcaggattggcgaggtg
ccttataaggcaagaagtgggaacggatgggaatactggactcgtgttgtgtttgcacag
atggttataggctactccaaccaagcaaggaaagcccggatggcagaaccggcaaacaga
gacaaaaaggacttgccgctgtttggcctctggcagacggaggaataccagccccctgta
gccgtggatggaagggttccccggaatgaatttgggaatgtgtatctcttccaacccggc
atgttgcccataggctgtgtgcagctaaagcttcccaacctccatagagtggcgcgtaaa
ttagatattgactgtgtcccagctgttactggatttgattttcatggtggctactcgcac
ccagtcaccgaaggttatgtgatctgcgaagagtacaaagaagtgcttgttgctgcgtgg
gagaatgaagaagccgagagagagaagaaggaaaaggagaagcgggagaagagagtcctg
gggaactggaaattgctgacaaaagggcttctgatcaaagagagactgaagagacgctac
tctaccaagaatgaggcagcaggagcaatggtgacaccgggaggcgggttctcctctgat
gaggatgaaggaggcggagaaccaagctcagagacaccagctggggatgtggacgtttct
tggccccaaaatcggcaactggaacaagagagggagggagggaaaaggaccagaaagagc
aagagggaaaagaaaggagaagcaaaatacttgttcccatttgagaagctgtaa
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