Podarcis raffonei (Aeolian wall lizard): 128408549
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Entry
128408549 CDS
T09310
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04510
Focal adhesion
praf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128408549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128408549
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
F5_F8_type_C
Alanine_zipper
DUF948
Crescentin
Motif
Other DBs
NCBI-GeneID:
128408549
NCBI-ProteinID:
XP_053234429
LinkDB
All DBs
Position
2:complement(106026882..106095900)
Genome browser
AA seq
1840 aa
AA seq
DB search
MNRLKLPMLPMALLLYLLLWVRLADAQGTESPDLLYHGCSEGSCYPATGNLLIGRTQRLS
ATSTCGLEGPQEYCIVSHLQDSEKCFLCDSRSPSLRESHHIENVIYLSGRDGEQTWWQSE
NGVEQVSISLDLEAEFHFTHLIMKFKTFRPAAMLIERSSDFGQSWKVYRYFAFNCSKLFP
GVPMQVPTHVNQAICDQRYSEIEPSSHGEVIFKVLDPAVKVEDPYSQEIQDLLRVTNLRV
NFTKLHTLGDNLLDFRHQVLQKYYYAVYEMVLRGSCFCYGHASECAPLAGAPSRVEGMIH
GRCVCKHHTKGLNCELCKDFFQELPWRPAEAHNPHACKECNCNEHSHKCHFDMAVYLATG
NTSGGVCDECEHNTMGRHCQLCKPFYYRNPLADIRASTACIPCDCDPVGSLDGGVCDSHT
DAMLGMIAGQCRCKENVKGVRCDSCKEAFYGLSRNDPLGCQPCRCDPRGIIPGSLPCDHI
SGDCYCKRFVAGRYCNQCLPEYWGLSNDMAGCRSCACDFGGAYSNRCSMDDGQCPCRPHL
IGRQCDEVQPGFFCMPLDYYMYEAEHATGLAPTHQGLPGALRPEAPVDCVEYYNGVQNGR
KVRLRRQHSTIRLLQQRAALRRARQLQQKPDVEVMQREHTGHMITWTGPGFARVRDGAGL
SFHIDNIPYPMEYDILLRYEPESTEDWEAVVSVSSRALPMSPRCGNVLPSEQMYRESLPH
SSRYVLLPRPFCFEPRNHYEITVRFQRAGVAQRHPAAFILVDSLVLLPRVTELPGLHGSS
PAAVERREALERYTCLEVFRMATMPDLAETCARLLCSISALMHDGAMPCQCDPQGSTSSV
CHKLGGQCQCKPNVMGRRCDQCVPGTYGFGPYGCSPCACSPEGSVSRICEPVSGQCRCQH
GAIGRQCDQCPPGQWGFPTCRPCHCNGHSEECDLHTGACHQCRDYTAGRHCERCLDGYYG
DPVLGSGQQCRPCPCPGYPGSRHYHGISCHTDRETNQIVCLCAPGYTGPRCDHCSSGYFG
APEQEGGACRPCQCNNNIDPSDPEACDPHSGQCLRCLYHTGGPHCSECQPGYYGNAFQRS
CRRCTCNEQGTLPSHCSKGICHCDRTTGNCPCRPNVVDKNCDRCAPNFWGFGSDVGCQPC
NCDPVHSLRSDCNMFTGQCHCQPGFGGRVCSHCQEDHWGDPEQECLACECDPTGSESPQC
DRLTGHCTCQGGFTGPRCDQCRRGFQQNFPRCSPCHPCFGQWDAVLAQLWEQLRRLQGTV
QALKEGGPIPAASSSRMRNLEDRLGDVERLLGDGSSPSTPLLRQLSALLEDTRADTDELW
QQLQATDSHLDGTEKEAGGQKRRLNALSQELGELNHTVSYLNSQLQRMTNASFNKSFQSI
LGFFQESQLAQQQANSSVHGPQSPVGQSKLTHQATVELLRRRGDAFRRTAAAQRKSLRDL
QKKAGSLSLSRINQKICGASGEEGCEQTPCGGASCRDSLGQRHCGGPGCTGALPVSMKAL
STAQNISSQLESSARHLGTIASKVQEIQDLAQNARSHAQDTLDRAQGARNRVEKSTAKLR
EFIQRIKDFLAEEGADPESIELVAQQVLNISLPSSPDQISNLIKDIRDRISQLDGVDIIL
NDTVHSLNRTRELLAKAELAKGRAEGVQETITETRAALNGTKVKLEAAEQAMNKTKEAIQ
AVTGRVRQAGRKLEKLVDAESKLESRLKGLAQNVSALQNKSQNNQKLAQEAKGKAERATT
AAGRLENEVEKVMKRYQKLQEEVDKQPQDAMLRLKNLREEAQNLLDKATGSKRKLEELEG
RFEANEKQMKEKATVLQKLEGQVTELLQYIRDKATAYATC
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttgaaacttcccatgctgcccatggcactacttctctacttgcttctctgg
gtccggttagccgatgctcagggcacagaatcgcccgacctgttgtaccatggctgttca
gaggggagctgctacccagccacagggaatcttctcatcgggaggacgcagaggttgagc
gccacatccacgtgtggcctggaggggcctcaggagtactgcatcgtcagccatttgcag
gactctgagaaatgcttcctttgtgactcacgctccccttccctgcgcgagagccaccac
attgagaatgtcatctacctgagtggtcgggatggtgagcagacctggtggcagtctgag
aatggtgtagaacaggtcagcatctccttggacctggaagccgagttccactttactcac
ctcataatgaagtttaagacattccgcccagcggccatgttgattgaacgttcgtcagat
tttgggcaaagctggaaggtttatcgctactttgccttcaactgctccaagctcttccct
ggcgtccccatgcaagtcccaacacacgtcaaccaggcgatctgtgaccagcgatactcc
gagattgagccctccagccatggcgaggtgattttcaaagtgctggatccggcggtgaaa
gttgaggacccatacagccaggaaatccaagatctgttgcgcgtcaccaacctgcgggtg
aacttcacaaagctgcacactctgggcgacaacctactcgactttcggcatcaggtgctg
cagaaatactactacgccgtgtacgagatggtgctgcgtgggagctgcttctgctatggg
cacgcctcagagtgtgcccccctggctggagcgccaagcagagtagaaggcatgatccac
ggacgatgtgtgtgcaagcaccacaccaagggcctcaactgcgagctctgcaaggacttt
ttccaggagttgccatggagaccagctgaggcccacaacccacacgcctgcaaagagtgc
aactgcaacgagcactcccacaagtgccacttcgacatggccgtgtacctggccacgggc
aacaccagcggcggggtctgtgacgagtgcgaacacaacaccatgggccggcactgccag
ctctgcaagcccttctactaccgcaaccctctggctgacatccgtgccagcacggcatgt
atcccatgtgactgcgacccagtgggctccttggacggtggcgtttgtgacagtcataca
gatgcgatgctgggcatgatcgctgggcagtgccgctgcaaagagaacgtcaaaggcgtg
cgttgcgacagctgcaaagaggccttttacggactgagccgcaatgaccctcttgggtgc
cagccctgcaggtgtgaccctcgtgggattatcccaggtagccttccctgcgaccacatc
agcggagactgctactgcaagcgatttgtcgccgggcgatactgcaaccaatgtttgcct
gaatactggggtttgagcaatgatatggctggctgccggagctgcgcttgtgattttgga
ggtgcctacagcaacaggtgttccatggatgatgggcaatgcccctgtcggccccacctc
atcgggcgtcagtgtgatgaagtgcagccggggtttttctgcatgcccctggactattat
atgtatgaagcagagcatgccacaggacttgcaccaacccatcagggcctgccaggtgcc
ttgcggcccgaggcccctgtggactgtgtggaatattacaatggggtccagaacgggcgc
aaagtgaggctgcgacgccagcacagcacgatcagactcttgcagcagcgagcagcgctc
cgaagagccaggcaacttcagcagaagcctgatgtggaagtcatgcaacgtgagcataca
ggtcacatgattacatggaccggccccggctttgcacgcgtgagggatggggctggttta
tccttccatatcgacaacattccctaccccatggaatatgacatcctgttgcgctatgag
cctgagtccacagaggattgggaagctgtcgtcagcgtcagctcacgggcgttgcccatg
agccctcgctgcggcaacgtgctgccctcggagcagatgtatcgggagagcctgccccat
agttccaggtatgtgctcctgccacggcccttctgtttcgagcccaggaaccattatgag
atcaccgtgcgattccagcgggcaggggtggcacagcgccatcctgcagccttcatcctc
gttgactcgctggtccttctgccccgtgtgacagagctgcccgggctccatggtagcagt
cctgcagcggtggagcgccgggaagcgttggagcgctacacctgcctagaggttttccgc
atggccaccatgcccgacctggctgagacctgtgcccgcctgctgtgcagcatctctgcc
ctgatgcatgatggggctatgccctgccagtgtgatccccagggctccaccagcagtgtt
tgccacaaactgggagggcaatgccagtgtaagcccaatgtgatgggtcggcgctgtgac
cagtgtgtcccaggcacctacggattcggaccctacggctgcagcccctgcgcctgttcc
cccgaaggctcagtctccaggatctgcgaaccagtaagcgggcaatgccggtgccaacat
ggtgccattggacgccagtgcgaccagtgcccaccaggccagtggggcttcccaacttgc
cggccttgccactgcaacgggcactcggaggagtgcgacttgcacacgggggcctgccac
cagtgccgcgattacacggctggccgccattgtgagaggtgcttggatggttactatgga
gaccccgtcttgggctcagggcaacagtgccgtccctgcccttgccctgggtatccaggg
tctcggcactatcatggcatctcctgccataccgacagggaaaccaatcagattgtttgc
ctttgtgctccaggctatacaggaccacggtgtgaccactgctcatctggctattttgga
gcccctgagcaggaaggtggagcctgccgcccctgccagtgcaacaacaacattgacccc
agcgaccccgaagcctgtgatccacacagcggccaatgccttcgctgcctttaccacact
ggcgggccccactgttctgagtgccagcctggctactatggcaatgccttccagcgtagc
tgccgacgctgtacctgtaacgagcaggggacactgccctcgcactgctccaaaggcatc
tgccactgcgatcgaactacaggcaattgcccctgccgccccaacgtggtagataagaac
tgtgacaggtgcgcccccaacttctggggcttcggcagtgacgtggggtgtcagccgtgc
aactgtgatcctgtccattcgttacggtcggactgcaacatgttcacagggcaatgccat
tgccagccgggctttgggggccgcgtttgctcccactgtcaagaagatcactggggagac
ccggaacaggaatgtctagcttgtgagtgtgaccccacggggtccgagagcccgcagtgt
gaccgtctcacgggacactgcacatgccaaggtggcttcacggggccgcgctgcgaccag
tgccgacggggcttccagcagaacttcccccgttgctccccctgccacccttgcttcggc
cagtgggacgcggttctggcacagctctgggaacagctgcggaggctgcagggcacagtg
caggccctgaaggaaggggggcctatccctgcggccagcagcagccgcatgcgcaacctg
gaggacaggctgggtgacgtcgagcggctccttggggacggcagcagtccaagcactccc
ctgttgcggcagctcagtgcccttctggaagataccagggcggacacagatgagctctgg
caacagctgcaggctacagactcacacctggacggcaccgagaaggaagctggcgggcaa
aagaggcgtctgaatgcgctgagccaagagctgggggagctcaaccacaccgtcagctac
ctcaacagccagctgcagaggatgacaaacgccagcttcaacaagtctttccaaagcatc
ctgggattcttccaggagtcacagctggcccagcagcaagcaaacagctccgtccacggc
cctcagagcccggtgggtcaatccaagctcacgcatcaggccaccgttgagctcctgaga
cgcaggggagatgctttccgcaggacggcagctgctcagcggaagtctttgcgcgacctc
cagaaaaaggccggcagcctcagtctgagcaggatcaaccagaagatctgcggtgcttct
ggagaagagggctgtgagcagaccccgtgcggaggggcttcctgccgggacagcttaggt
cagcggcactgcggaggccccggctgcactggagcactgcctgtgtccatgaaggccctc
tctacagctcagaacatctccagccagctggagagcagcgcaaggcacctgggcaccatt
gctagcaaggtgcaagaaattcaggacttggcgcagaatgccaggagccatgctcaggac
actctggaccgcgcacagggggcccggaaccgtgtggagaagtcgacggccaagctgcgg
gaatttatccagaggataaaggacttcctagcagaggaaggtgctgatcctgagagcatt
gagcttgtggctcagcaggtcctcaacatctccctacccagcagccctgatcagatcagc
aacctgattaaggacatccgggatagaatcagtcagctggacggggtggacattatcctg
aacgacacggtgcacagcctgaaccgtaccagggaactcttggcaaaagcggaactagct
aaagggcgagcggagggtgtgcaagaaaccatcacagaaacacgcgcggcactcaatgga
acaaaggtcaaactggaggcagcagagcaagctatgaacaaaaccaaggaagccatccag
gctgtgactggccgcgtcagacaggccggacgcaagctcgagaaactggtcgacgcagag
tcgaaactggagagccgcctcaaaggtctggcgcagaacgtgagcgcattgcaaaacaag
tcccagaacaatcagaaactcgcccaggaggccaagggaaaagcggagcgtgccaccact
gctgcggggaggctggaaaacgaggtggagaaagtgatgaagagataccagaagttgcag
gaagaagtggacaagcagcctcaagatgcaatgctcaggctgaaaaacctcagggaggaa
gcccagaatctcttggacaaggccacgggcagcaagaggaagctggaagagctggaaggg
cgcttcgaggccaacgagaaacaaatgaaggagaaagcaactgtgctgcagaagctggag
ggacaagtgactgaactcctgcagtacatccgggacaaagccacggcctatgctacgtgc
tag
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