Podarcis raffonei (Aeolian wall lizard): 128408603
Help
Entry
128408603 CDS
T09310
Symbol
DHX16
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128408603 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128408603 (DHX16)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128408603 (DHX16)
Spliceosome [BR:
praf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128408603 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
SecA_DEAD
PWI
Flavi_DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128408603
NCBI-ProteinID:
XP_053234523
LinkDB
All DBs
Position
2:109733782..109750832
Genome browser
AA seq
1059 aa
AA seq
DB search
MAGELERWVSGQLHSLLGLSERHVVAFMVGLAHRSRTPEDLLARLEETETLRAADPSARA
FAQQLWERVPHQAPRERPARLAEQEALAFQQKNRSYTLLEDSDDEETGEAARGSKRQRPP
RGPEGKQRKRHKHLRQRKEEEEDDKDSDEKGSRDDGGKKSAASPTIKEDSEDEWDRSERE
RLQDLEERDAFAERVKRKDKEKTRNILERSDKKAYEEAQKRLKIAEEDKKVMVPELRKKS
RREYLAKREKDKIEDLEAEIADEEYLFSELNLTAQERQELEYKREVRDLAKRYKQAGEQE
KLEKSNRYYMPEESRSKKIPDRYEDPQTEDHMAPRDEQRRWEEDHIGAASLHFGARDASQ
RHPHKDYEYVLEEDEMIQFVNAVQMRGTNQGKSVEENPELSEAERKKLSIQEVRRSLPIF
PYRADLLAAIAEHQTLIIEGETGSGKTTQIPQYLFEEGYTQKGMKIGCTQPRRVAAMSVA
ARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLSSYSVVIIDEA
HERTLHTDILFGLIKDIARFRPELKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDIF
YTKAPEADYLEACVVSVLQIHVTQPRGDILVFLTGQAXIEACCEMLQDRCRRLGSKIAEL
LVLPIYANLPSDMQAKIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNA
RTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGN
VVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDP
MLSKMILASEQYKCSEQILTIAAMLSVNNAIFYRPKDKVVHADNARMNFFLPGGDHLVLL
NVYNQWVECGYSMQWCYENFIQFRSMRRARDVREQLEGLMERIEVDITSSEGDYIPVRKA
ITAGFFYHTARLTRSGYKSVKHQQTVFVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIE
IDSTWLLEVAPHYYKAKELEDASNKKLPKKVGKTREELG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagctggagcgctgggtgtccgggcagcttcactctctgctggggctgagc
gagcgccatgtggtcgccttcatggtgggcctggctcaccggagccgaaccccggaggac
ctgctcgcgcgcctggaggagacggagacgctgcgcgccgcggacccttcggcgcgagcc
ttcgcgcagcagctgtgggagcgggttccgcaccaggccccacgggaacgtccagctagg
ctggccgaacaggaagccttggcctttcagcagaagaaccgttcatacaccctgttggag
gacagtgatgatgaagaaactggcgaggcagctcggggttccaagcgtcagcgccctcca
cgaggccctgagggcaagcagcggaagcggcataaacacctgaggcagcgcaaggaggaa
gaggaagacgacaaggactctgatgagaagggcagccgagatgatgggggaaagaagtca
gcagcatcccccaccattaaggaggattcagaggatgagtgggaccggagtgagcgagag
cgactgcaggacctggaggagcgggacgcttttgctgaacgtgtcaaacgcaaggacaag
gagaagacacgcaacattctggagcgttcagacaagaaggcctatgaagaggctcagaag
cgcctgaagattgcagaagaagataagaaagttatggttccagagctgcgtaagaagtcc
cgccgagagtatttggcgaaacgcgaaaaggacaagatagaagacttggaggcagagata
gccgatgaggagtacctcttctctgagctcaacctaactgcccaagagcggcaggagctg
gaatataaacgtgaagttcgtgacttggcaaaacggtacaaacaagctggagaacaggaa
aagctggagaagagcaatcgctactatatgcctgaggagagtcgcagcaagaagatacct
gatcgctatgaggacccccagacagaggatcacatggccccgcgagatgagcagcggcgc
tgggaggaggaccacatcggggcagcttccctccattttggggcccgggatgccagtcaa
cgccatcctcacaaagactatgaatacgtgcttgaagaggatgagatgatccagtttgtg
aacgccgtgcagatgcggggcacaaaccagggcaagtccgtggaggagaatccagagttg
tccgaagctgagcgcaagaagctttccatccaggaggtgcgccgcagcctgcccatcttt
ccttaccgtgcagacctgttggccgccattgccgaacatcagacgcttatcatagaagga
gagactggctctggcaagaccactcagatcccacaatacttgtttgaagagggctacaca
cagaaaggaatgaagatcggttgcacccagcccaggcgagtggcagccatgagtgttgct
gcccgtgtttcccaggaaatgggtgtcaaacttggaaatgaggtgggctatagcattcgt
tttgaggactgcacctcagagcggactgtgctgaagtacatgacagatgggatgctgctg
agagaattcctcactgagcctgacctgagcagctacagtgtcgtcatcatagatgaggct
cacgagcgcacgctgcacacagacatcctgtttgggctgatcaaggacattgctcgcttc
cggcctgagctgaaggtgctgattgccagcgccaccctggacacggagcgcttttccacc
ttctttgacgatgctcccatcttccgcattcctgggcgccgcttccctgttgacatcttc
tacaccaaggctccagaagctgattacctggaagcctgtgtggtatcagtactgcagatc
catgttacacagcctcgaggggacatccttgtattcctcactggccaggcataaattgaa
gcatgctgtgagatgttgcaagatcgctgccgtcgcctgggttccaagattgcagaactt
ctggtcctccccatctatgctaacctgccctctgacatgcaggccaagatctttgagcca
accccaccaggggccaggaaggttgtcgtagccaccaacattgcggagacatctctgacc
atagacggcatcatatatgtgattgaccctggtttttgcaagcagaagagctacaacgct
cgcacaggcatggagtcgctcattgtcactccgtgctctcgggcttctgccaaccagcga
gcaggacgggctggccgtgttgctgcagggaagtgcttccgtctctacacagcctgggcc
tacaagaatgagatggaggagaccacagtgccagaaattcaaaggaccaacctgggcaat
gtggtgctgctgctcaaaagcttgggcatcaacgacctgatccactttgacttcatggac
ccaccgccccatgaaactctagtattggcactggagcaactctatgccctgggagccctc
aaccatcttggcgagctcaccaagctgggccggaagatggcagagctgcctgtggatccc
atgctgtccaagatgatcctggcttcagaacagtataagtgctcagagcaaatccttacc
atcgctgccatgctttcagtcaacaatgccattttttaccggcccaaggacaaagtggtc
catgctgataatgcccgcatgaacttcttcctgcctggtggggaccacctggttcttctc
aatgtttataatcagtgggtggagtgtggttactccatgcagtggtgctatgagaacttc
atccagttccgctctatgagacgagcccgggacgtgcgagaacagctggaaggattgatg
gagcgcattgaagtggacatcacttccagcgagggagactacatcccagtccgcaaggcc
atcactgctggcttcttttatcacacggcccgcctgacccgcagtggctacaagagtgtc
aagcaccagcaaacagtgtttgtccaccccaacagttccctgtttgaagaacaaccacgc
tggctcatctatcatgagttggtcttcaccactaaagaattcatgagacaggtcatagag
attgacagtacgtggctgttggaggtggccccgcattactacaaagccaaagaattggag
gatgcgtccaacaagaagctacccaagaaagtggggaagacccgggaggagctgggatag
DBGET
integrated database retrieval system
